Aphelocoma coerulescens (scrub jay): 138114556
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Entry
138114556 CDS
T10543
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138114556 (TRPC1)
Ion channels [BR:
acoe04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138114556 (TRPC1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
138114556
NCBI-ProteinID:
XP_068880229
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Position
9:12058120..12077123
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AA seq
781 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GGMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTFKKILTVLMVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNIIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagcgcggacccgtccgcctcggcctcacccaacaagctgctg
gcactgaaggatgtgcggcaggtgaaggaggagaccacgctggacgagaagcttttccta
ctggcctgcgacaaaggtgactattacatggttaagaaactcttagaggaaaacagctca
ggtggaatgaacataaattgtgtggatgtgcttggacgaaatgctgttaccataaccatt
gaaaatgaaaacttggacatactacagctgcttttggattatggctgccagtcctcggat
gcacttttggtggctattgactcagaagtggtgggagctgttgacattctacttaatcac
cgacccaaacgatcctccagaccaaccattgtgaaattaatggaacgcattcagaaccca
gagtactcaacaaccatggatgtggcaccagtaattttagctgctcatcgtaacaactat
gaaattctcaccatgctgttgaagcaagacatatcattacccaaacctcatgctgtgggc
tgtgagtgcacactgtgcactgccaagaacaaaaaagatagtctgcgacattccaggttt
cgtctggacatttatcggtgtttggccagtcctgccttaataatgttgacagaggaggat
ccaatcctacgagcttttgaactcagtgcagacttgaaagaactaagccttgttgaggtt
gaattcagaaatgattatgaggagctcgctcaacagtgcaaaacctttgctaaagattta
cttgcacaagcgcggaattcccgggagctggaagtgattctcaatcacacctccagtgat
gaacatgtagacaagcgaggattgttggaagagaggatgaacttaagccgtttaaaactt
gcaatcaagtataatcaaaaggagtttgttgcccagtccaactgccagcagtttctcaac
acggtgtggtttggacagatggccggctatcggcgcaagcacaccttcaagaagatcctg
actgttctgatggttggcattttctggccagttttgtccctgtgttacttgttagcccct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcgtatttcacatttctgttattacttaatttgtattcccttgtctacaatgagaataag
aagaatacaatgggaccagccctggagagaattgactatcttctgataatatggcttatt
ggaatggtgtggtcagatgtcaagaggctctggtacgatggtttagaagattttttagaa
gagtcccgcaatcagcttagttttgtcatgaattccttgtatttggcaacttttgccctc
aaagttgttgcccataacaagtttcatgattatgctgaaaggaaggactgggatgcattc
catcctaccctagtggcagaaggtctttttgcctttgcaaatgttcttagttacctgcgt
ctcttcttcatgtacacaaccagctccattctgggaccactccagatttcaatggggcag
atgctacaagatttcggaaaatttctgggcatgtttcttcttgtcttgttctcattcaca
attggattgacacaactttatgataaaggatttactgtaaatgaagaaaaagactgtgcg
ggcattttctgtgaacaacagagcaatgacacattccattcgtttattggtacatgtttt
gctctcttttggtatatattctccctggcacatgttgcaatctttgtgacacgttttagc
tacggtgaagaattacagtcttttgtgggtgctgttattgttgggacctacaatgtggtg
gttgtgatagtattaactaaactccttgtggcaatgcttcacaaaagttttcagctgata
gcaaatcatgaagataaggagtggaagtttgctcgtgccaaactttggcttagctacttc
gatgataaatgcacactccctccacctttcaacattataccctctcccaagactatctgt
taccttttcaacagtctcagtaaatggatctgctctcatacatcaagtggcaaagtgaaa
cgtcagaacagcctaaaggaatggagaaatctgaagcagaagagagatgagaattaccag
aaggtgatgtgttgcttagtccaccgttacttgacttccatgagacagaagatgcaaagt
acagatcaggccactgtggaaaacctcaatgaactgcggcaggacttgtcaaaattccgg
aatgaaatgagagacctgcttggctttcggacttctaaatatgctatgttttatccaaga
aactaa
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