Aphelocoma coerulescens (scrub jay): 138114665
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Entry
138114665 CDS
T10543
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138114665 (TRIP12)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
HECT type E3
138114665 (TRIP12)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138114665
NCBI-ProteinID:
XP_068880486
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Position
9:complement(11530190..11609108)
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AA seq
2065 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPDY
RRTNSPSSAKKPKALQHTETSSETNKPHTKSKRRHSDQEQPKSTQLPSTSKAHTRKGGAA
GSSRSQKRKRTENLSCIKSGSSVESTGTEEKSAKVSKLASKSVTSAKAGCSTITDSSSSA
STSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEPSKTGGSSKF
DWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSL
RRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEPPQGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRM
FSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICEL
MPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKED
PELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHI
ASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKVC
TNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPART
AGVSGLARAASKDTISNNREKIKGWIKEQAHKFVEHYFSSENMDGSNPALNVLQRLCTAT
EQLSLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLK
RFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGS
SFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGY
GRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYS
LQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKTS
PRNSKKHDELWHDGVCPSVLNPLEIYLISTPPENITFEDPSLDVILLLRVLHAISRYWYY
LYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTR
QMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQ
DLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGT
KYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWML
RQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCSV
EDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFES
VFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFD
SEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPD
YSTIEIMREKLLIAAREGQQSFHLS
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaagaagatccagagagagtcaatacttcagaaaagcaaaaaacg
gggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagattac
aggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacatactgaaact
tcctcagaaactaacaagccacatactaaatctaagagaagacactcagaccaagagcag
cccaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagctgct
ggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagtggg
tcatcagttgaatcaactggcactgaagaaaagtcagcaaaagtctccaagctggcttca
aaatcggtgacctcagccaaagctgggtgtagcaccatcaccgattcttcttcttcagct
tccacctcctcctcctcttctgctgttgcctctgcttcttctactgttcctcagggtgcc
agagtgaaacagggaaaggaccagagtaaggcgagacgttcccgttccgcatccagcccc
agtccaagaaggagtagcagggacaaagaaccgagtaaaacaggtggctcttcgaagttt
gactgggctgctcgattcagcccaaaagtcagtctccctaaaacaaagctgtctctacca
ggctcttccaagtcggagacatcaaaacctggaccttcaggactacaggctaagctagca
agtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagttta
cggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggctct
ggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcctgac
aacaaccaggatggagttaactcttcagctgcacgaacagatgagcctccccagggagct
gcagcttctagttctgttgctggagctgtaggtatgacaacttctggagagagtgagtca
gatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcctcac
ctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagtgga
gctagttctaaagctcaacagcttttacaaggtctccaagccactgatgaaagtcagcaa
ctacaggcagtgattgagatgtgccagctgttggttatgggaaatgaagaaacattagga
ggatttccagtcaagagtgttgtaccagctttgataacactcctgcagatggagcacaac
tttgacattatgaatcatgcatgtcgggccttaacatacatgatggaagcacttcccaga
tcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttatccag
tgcattgatgtggcagagcaggcgcttacagccctggagatgttgtcacgcaggcacagt
aaagccattctgcaggcaggtgggttggcagactgtttgctgtatctggaattcttcagt
ataaatgcacaaaggaatgcactagctatcgctgccaactgctgccagagtataacgcct
gatgagtttcactttgtggcagactctttgccactgctaacacaaaggttaacccatcag
gacaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggacaacttccag
catgaagagaatttgctgcagcaggttgcttccaaggacttgttaacaaatatccagcag
ctcttggttgtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgcatg
ttctccctgatgtgctccaactgccccacacttgcagtccagcttatgaagcaaaatatt
gcagaaacacttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaaatt
gaccttgttccacgaagtcctcaagaactttatgaacttacttctcttatctgtgaactg
atgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaaggaaat
gcacaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctctggcatccg
tataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgagata
agcctgtctacacttgggcgtgtctatactattgattttaactctatgcagcaaataaat
gaggatactggaacagcccgtgccattcagcgaaaaccaaaccctttagccaatacaaac
actagtggacattcggaattgaagaaggatgatgctcgagcacagttaatgaaagaggac
ccagaactggcaaaatcctttatcaaaacattgtttggtgttctttatgaagtatatagt
tcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatttat
tttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcatatt
gcctccatgctgtcgagtcaagaccttaagatagtagttggagccctgcagatggcagag
attttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtgatg
caccaagtgaaaaatttggcagagtctgaggctttgctaacaagcccaccgaaagtatgc
actaatggatcaggaacgctgggtaccactacgacaataagtactgggacagccactgct
gccagcaatgcagctgcagatttgggctctcccagcttacagcacagccgggaggattcc
ttggatctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgccaaaa
cgagggccaaggagaccaaaatattcccctccaagagatgatgacaaagtagacaatcaa
gctaaaagccctacaactactcagtctcctaaatcttctttcttggcaagtttaaatcct
aagacatggggaagattaagcacacaatccaacagtaataatattgaaccagcacgaaca
gcaggagtaagtggtcttgcaagggctgcttccaaggataccatttccaataacagagaa
aaaattaagggctggattaaggagcaagcccataaatttgtagaacattactttagttct
gaaaacatggacggaagcaatcctgcactaaatgtattacagagactttgcactgcaact
gaacaactcagcctccaggtggatggtggaacagagtgccttgtagaaatccgtagcatt
gtctcggaatctgacgtctcctcatttgaaatccagcatagtgggtttgttaaacaactg
ctgctttatttgacatctaaaagtgaaaaagatgctgttagcagggatatcagattgaaa
agatttcttcacgtatttttttcctctccacttcctggagaagagccccttggaagatta
gagccattagaaaatgcacctttgttggcattagtccataaaatgaacaactgcctcagt
cagatggaacagtttcctgttaaagtgcatgacttccctagtggaaatggaacagggagc
agtttttctcttaacagaggatcgcaagctttaaaattcttcaatacacatcaattaaaa
tgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggccctgtg
aagattgatcctctggctttggtacaagccattgaaagataccttgtagttagaggctat
ggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaatagat
gaatctttggctgctcaattcttaaattcagggaatgtgagacatagattgcagttttac
attggagatcacttgctgccatacaatatgactgtatatcaggcagtcaggcagtacagt
ttgcaagctgaggaagagagggaatctacagatgatgaaagcaacccattgggaagagct
gggatttggacaaaaacacacaccatttggtacaaacctgtgcgagaggatgaagatggt
aataaggactgtgttggtggtaaaagaggaagagcacaaactgctcccacaaaaacctcc
cctcgaaattctaaaaaacatgatgaattgtggcatgatggtgtatgcccttcggtatta
aatcctctggaaatttacctcatatctactccacctgaaaatataacatttgaagacccc
tcattagacgttattcttcttttgagagttttacacgctatcagtcgatactggtattac
ttgtatgataatgcagtctgcaaggagataattccaacctcagagtttatcaacagtaaa
ctgacagcaaaagcaaacaggcagcttcaggaccctttggtaattatgacaggaaacatc
ccgacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacccgc
caaatgctgttttatgtgacagcctttgaccgcgatcgagccatgcaaagactactggat
actaatccagaaatcaatcagtcggattctcaggatagcagagtggcaccgcgactggac
aggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatgcag
gatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcacaggc
ctaggccctacactagagttctatgcacttgtatctcaggaactgcagagagcagactta
ggcctttggaggggagaagaagtgactttagccaatccaaaaggaagccaggaaggtacc
aagtacattcataaccttcaaggcctttttgcacttccttttggtagaacagccaagcca
gctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaaggca
atcatggacttcagactggtggaccttcctcttggacttcctttttataaatggatgcta
cgacaggaaacttccttgacttcgcatgacttgttcagtattgatccagtagtagccaaa
tcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggataaaact
cagaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctcagtg
gaagatctagggctggacttcacacttcctgggtttcccaatatagagctgaaaaaaggg
ggaaaagatacaccggtcactatccacaatttagaggagtatctcagattggttatattc
tgggcactaaatgaaggtgttgccagacagtttgattccttcagagatggatttgagtcg
gtcttcccccttagtcatcttcagtacttctatcctgaggagttggagcagctcttgtgt
ggcagcaagacagacacttgggatgcaaagactttaatggaatgttgcaggcctgatcac
ggttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagttttgat
agtgagcagcaaagactgtttcttcagtttgtgacaggcagccccagactgcctgtagga
ggtttccgaagtttgaatcctcccttgacgattgtacggaagacatttgagtccacagag
aatcccgatgatttcttaccctcagtaatgacttgtgtgaactatctcaaattgccggac
tattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcagcag
tcattccatctttcctga
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