Aphelocoma coerulescens (scrub jay): 138116347 Help Entry 138116347         CDS       T10543                                  Symbol DMXL2 Name (RefSeq) dmX-like protein 2   KO K24155   rabconnectin-3a Organism acoe  Aphelocoma coerulescens (scrub jay) Pathway acoe04142   Lysosome Brite Membrane trafficking [BR:acoe04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     138116347 (DMXL2)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     138116347 (DMXL2)    RAVE complex     138116347 (DMXL2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_IFT140_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_HPS5 ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_WDR19_1st Motif Other DBs NCBI-GeneID:  138116347 NCBI-ProteinID:  XP_068881666 LinkDB All DBs Position 10:complement(1561563..1609186) Genome browser AA seq 3069 aa AA seqDB search MHLHQVLTGAVNPGDNGYSVGSVQDTPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQV SCVECSQRQGRIAASYGNAVCIFEPLGINSHKRNCQLKCQWLKTGQFFLSSMTYNLAWDP QGNRLLTATDFLQLWAPPSDDILEEDEDEDANNQIKDDKVLPVLNDWKCIWQCKTATSVH LMSWSPDGEYFATAGKDDCLLKVWYPMTGWKSSLLPQENEEKKKCSEDVQFSFVYLAHPR AVTGFSWRNISKYMPRGLVCNVLLTSCLDGICRLWAETLLPEDTLLGEQICETTTSSIGS TISQSGKQKDTIQHALETIHHLKNMRKGQRRSSVLVTHTDVLPDQQGTHEVQRHISHQAN ALGHFHIAASINPNTDIPSVLAGTAFNTDEGSGGFVVHWLNNKEFHFTSSIEVFMQHLRK ISEQQLEQDFDVEAEEEEETEEKEKGLHMKLDHDLSIDRESETGTGTGSSEHEDGEREGS PKASLLAGPRLPLPTVLLDRKIDLLLTEWNRNPDMLFTVHPVDGTFLVWHVKYLDEYTPG IFRQVQVSFSSRIPVAFPSGDASSLSKNIMMYACPVFVKDNSSAAQQKTMDFPDKTLANR GPSFAQDSENVNIISPVVMMISKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFH LNDLACHSVLPLLLTSSHHNALLTPESDTSWDSDRINRMMDPMKQKKGSSKQQLKNAATR TFHDPNAIYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGT YCNSASACFVASDGKNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCI IELDAITNKCGSNTQLLHVFQEDFILGYKPHKEDVEGKETEIFFQPSQGYRPPPFSEKFF LVVIEKDSSGCSVLQMWHLHLKSVQACLAKPTEASSVDNKLSVPEQKTVDSSPDVSPGIS PIPRSSSIANLQTASKLILSSRLVYSQPLDLPVGVEVVRATPSAGHLSSSSIYPVCLAPY LIVTSCSDNRVRFWRCTVETDLSSRTEEKETYHWRKWPLMNDEGEDNSSTVSIVGRPVAV SCSYTGRLAVAYKQPIQHNGFVSKEFSMHVCILECESTGGSEWVLEQTIHLDDLVKVGSV LDSRVSVDSNLFVYSKSDGFLNKDKYLVPSIKHLVHLDWVSKEDGSHILTVGVGANIFMY GRLSGIVTDQTSSKEGVAVITLPLGGSIKQGVKSKWVLLRSIDLVSSVDGTPSLPVSLSW VRDGILVVGMDCEMHVYAQWKHAVKFGNGESDVFTSEDSATQDPFKTSAVVKKTSVIDGA GIVDDVFGTPTVIQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCI AGEVAIVKDTEAGEGTGPKRHLSRTISVSGSTAKDTITAGKDGTRDYTEIDSIPPLPLYA LLAADQDATYVSDEASKIPQGSEDHAKRKTEDQYSDLFQIQPVTTEDFIDFEPEKRESKS KVINLSQYGPTYFGREHASVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENRD KNYSGRDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGLSTCHFAWAFHSEAEEEL INMIPAIQKGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLAM KKKAVVWGLFRSQHDEKMTAFFSHNFNEDRWRKAALKNAFALLGKQRFEQSAAFFLLAGS LKDAIEVCLEKMEDIQLAMVIARLYESEFETSVTYTSILYEKILGCQKDGTGFSCTKLHS DPFLRSIAYWIMKDYTRALDTLLEQTPKEDDENPVIVKSCNPVVFSFYNYLRTHPLLIRR YFSSPEGTLATLGLKTEKSFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKIRK KSTVAGEKDSSSPSIQADVSDSKALQDGAGSGDVDWSKPISASFGLESTAESSAQFDWSQ PAVKFDDEPLTLDWGEDKNGSDEEDKDVGIMMKKSDSKSEDERTSDTSMAQTPHGEVSEA GDTEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAAMHEICNH DAGDKDYCKTYTKVNGDLLDPEDIMDKPDIGSYERHQIERRRLQAKREHAERRKWWLQKN QALLRVFLSYCSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSAS IASTKTVIANPVLYLNNHIHDILYTIVQMKSPPHPNIEDVKVYTLHSLAASLSASIYQAL CDSHSYSSQTEANQFTGMVYQGLLLSDRRRLRTESIEEHATPNSSPAQWPGVSSLINLLS SAQDEDQPKLNILLCEAVVAVYLSLLIHALATNSCNELFRLAAHPLNSRMWAAVFGGGAK LLVKPRRQSESIPAPPLPSEEMDKHRRRFNMRMLVPGRPVKDSNVPPPVPAERPSYKEKF IPPELSMWDYFMAKPFLPLSDSGVIYDSDESIHSDEEEDDAFLSDVQIQEHTDANSYSWA LLHLTMVKLVLHNIKNFFPIAGLEFTDLPVTSPLGIAVIKNLEHWEQILQDRMDQFEGPP PNYINTYPSDIGVGAGPAILRNKAMIEPENTPFKSKDYSALPAKRLWHFLVKQELLQETF IRYIFTKKRKQSESVEDRVEQVKQNCVAEDHKNKVEADLGYPGGKAKIIHKESDMIMAFA VNKANSNEIVLASTHDVQELDISALLAAQSFIWIGEEYDRESKSSDDVDFRGSTTTLAPS TAPSFGVSQIQPSPSMPWLGTGQTSTGAGVLIKRNLNNVKRMASHPVHQYYLTGAQDGSV RMFEWTRPQQLVCFRQAGNARVTRMYFNAQGNKCGVADGEGFLSIWQVNQTTSNPKPYLS WQCHSKTTSDFAFITSSSLVATSGQSNDNRNVCLWDTLVSSGNSLIHAFTCHDHGATVLQ YAPKHQLLISGGRKGYICIFDIRQRQILFTFQAHESAVKALALDPSEDYFVTGSAEGNMK VWRLTGYNLIHSFKNEHAKQSLFRNIGAGVTQIETVQGNRIFSCGADGTLKMRVLPNAFN VPSGIFDIL NT seq 9210 nt NT seq  +upstreamnt  +downstreamnt atgcatctgcaccaggtcctgaccggcgccgtgaaccccggcgacaacgggtactccgtg ggcagcgtgcaggacacccccttcacggcatatggctctggttgtgacattgttattctg gcaaatgactttgaatgtgtgcaaattattcccggtgctaaacatggaaacatccaggtc agttgtgtggagtgctcccagcgacaaggcaggattgcagcatcatatggaaacgctgtt tgcatttttgaaccgcttggtataaattctcataaaagaaattgtcaactgaagtgtcag tggctaaaaactgggcaattcttcctcagttccatgacttacaacctggcctgggatcct caaggtaacaggttactgacagcaacagacttcctgcagctgtgggcccctccgtctgat gacattctagaggaagatgaagatgaggatgccaacaatcagatcaaggatgataaagtt ctcccggttctaaatgactggaaatgtatctggcagtgcaagactgcaacatcagtgcat ttgatgtcatggtctcctgatggtgaatatttcgcaacagccgggaaggatgactgcctc ttaaaggtttggtatcctatgactggttggaagtcatctcttctgccccaggagaatgaa gaaaagaaaaagtgctcagaggatgtgcagttttcctttgtttatttggcgcatccccga gcagtgacaggattttcctggcggaacatcagcaagtacatgcccagggggttggtctgt aacgtgttactcacgtcatgcctcgatggcatctgccggctgtgggcagagacgctgtta cccgaagataccctcctgggggagcagatctgtgaaaccaccacttccagcatcggcagc accatctcacagtctggaaagcaaaaggacacaatacagcatgcactagagacaattcat catttgaaaaatatgagaaaaggacaaaggagatcttcagttcttgttacccacacagat gtcctgccagatcagcagggtactcatgaggttcagcgtcacatttctcatcaagcaaat gcacttggtcacttccacatagcagcaagcatcaaccctaatacagatattccatcggtg ttggctggaacagcttttaatacagatgaaggaagtggaggcttcgttgtccactggctg aataataaagaatttcattttacgtcctctattgaagtattcatgcagcatctaaggaaa atttctgagcaacaactagaacaagattttgatgttgaagctgaagaagaagaagaaaca gaagaaaaagagaaaggcttacatatgaagttagatcatgatttgtctatagacagagaa tcagagacagggactggtacaggctcttcagaacatgaagatggagagagagagggaagc cccaaagcttctctgctggcaggcccacgcctgcctcttccgacagttttgttagaccgg aaaattgacttgctcctaactgaatggaacaggaatccagatatgctttttactgtccat cctgtcgatggtacctttctggtgtggcatgtgaagtatttagatgaatacactccaggc atctttcgacaagttcaggtttcattttcttctaggattcctgttgcatttccatctgga gatgctagttcccttagcaaaaatattatgatgtatgcctgccctgtctttgtaaaagac aacagcagtgctgcacagcagaagacaatggacttccctgataaaactctagcgaataga ggaccaagctttgcccaagacagtgaaaatgtgaatataatttctcctgtggtaatgatg atttccaaacatatagatggctctctcaatcagtgggcagttacttttgctgataaatca gctttcactactgtgctaactgtatcccataagtttaggtactgtggacaccgctttcac ctcaatgatctggcctgccattctgttttaccactgctgctgacatcttcccatcacaat gctctgttaactcctgagtcagacacttcctgggactccgacaggataaacaggatgatg gatccgatgaaacaaaagaaaggttcttctaagcagcagcttaaaaacgcagcaacccgt acattccatgacccaaatgcaatctatagcgagctgattctgtggcgagtagaccccata ggacctttatcctacactggaggagtgtctgagttggctcgaattaactctcttcacacc tctgctttctctaatgtagcctggcttccaacactaattcccagctattgccttggtacc tattgcaactctgctagtgcttgctttgttgcatcagatggcaaaaacctgaggctctat caagctgttgtagatgcacgaaaacttctggatgaattatctgaccctgaatcatctaaa ctcattggggaggtgtttaatattgtgagccagcaatctactgctcgaccaggatgcatc attgagctcgatgcaataactaacaaatgtggctcaaacacacagttgcttcatgtcttc caagaagacttcattttgggatacaaaccacataaggaagatgtggaagggaaggaaact gagatatttttccagccatcacaagggtatcgtccaccacctttctcagagaagttcttc ctggtagtaattgaaaaagatagtagtggctgttctgttcttcaaatgtggcatcttcat ctcaaatctgtgcaagcctgcttagcaaaaccaactgaagcatcttcagtagataataaa ctcagtgtacctgagcagaagactgtggattcttctccagatgtatcacctggcataagt cccattccacgatcttcatcgattgctaaccttcagactgctagtaaactcattctgagc tccagacttgtgtatagccaacccctggatcttcctgttggtgtagaagtagtaagagca actccttcagcaggtcacttgagctcctcatcaatatacccggtctgcctcgcaccttat ttgatagtaacgtcctgttcggacaacagagtgcgcttctggagatgcactgtagagaca gacctgagcagcagaactgaagagaaggaaacgtaccactggagaaaatggcctctaatg aacgatgaaggggaagacaacagcagtacagtgagcatagtaggaaggccagttgctgtt agctgttcttacacaggacgtcttgcagtagcatacaagcaacccatacagcataatggg tttgtttccaaagaattttccatgcatgtttgtatacttgagtgtgagtctactggagga tcagagtgggttttggaacagacaattcatctggatgatttagttaaggttggaagtgta cttgactcaagggtcagtgtggatagtaatttatttgtttacagtaagtcagatggtttt ttgaataaagacaagtacctggtgcccagtatcaagcatttggtgcatttggactgggtt tcaaaagaagatggctcacatatactgacagttggggtgggtgccaacatcttcatgtac ggaaggctttcagggattgtaacagatcaaaccagcagcaaggagggagtagctgtcatc accttgcctctaggagggagcataaaacaaggtgtgaagtcaaagtgggtgttgctgagg tccattgatttggtatcatccgtggatggcactccttccctgcctgtctctctgtcctgg gtgagagatggaatactggtggtgggaatggactgtgaaatgcacgtttatgcccagtgg aaacacgccgtcaagtttggtaatggagaaagtgatgtttttacttctgaagactcagca acacaagatccatttaaaacaagcgcagtagtgaagaagaccagtgtaattgatggggca ggtattgtggatgatgtttttggcactccaactgtaattcaggatgggggcctctttgaa gctgctcatgttctttcacctactctaccccagtatcatccaacccagttattagaactg atggacctgggcaaagttcgccgagccaaagcgattctgtcacatctagttaaatgcatt gcaggagaagttgcaatagtcaaagacacagaagctggagaagggactggtcctaagcgc cacctttctcgcaccatcagtgtgagtggcagtactgccaaggataccatcactgcaggg aaagatggtacccgagactacacggagatagactcaattcccccactgcccctctatgca ctgcttgctgcagatcaggatgccacctatgtttctgacgaagcttctaaaatacctcag ggctctgaagaccatgcaaagagaaaaacagaggatcagtactcggatctgttccagatt caacctgttacaaccgaagactttatagattttgagcccgaaaagagggagagtaaatcc aaagttattaatctgtcacagtatgggccaacttactttggccgagaacacgccagtgtc ctttcaagccacctgatgcactcaagtctgccaggcctcactcgactggagcagatgttc cttgtagctttggcagacactgtggccacgacaagcactgaactggatgagaacagagat aagaattactcaggaagagataccttggatgaatgtggcctgcggtacttgctggccatg cgcttgcacacctgcctgctgacatccctgcctcccctgtaccgtgtccagctgcttcac caaggcctgtcaacttgccattttgcatgggccttccattctgaggctgaggaggagttg atcaatatgattcctgctatccagaagggagacccacagtggtctgaactgagagctatg ggtattggttggtgggtcaggaatatcaacactctccgaaggtgcattgagaaggttgca aaagcttcattccagaggaacaatgatgccttagatgctgcacttttttaccttgctatg aagaaaaaggcagtggtgtggggtctgttcaggtcccagcatgatgaaaagatgactgcc tttttcagccacaacttcaatgaagaccgatggcgtaaagctgctttaaaaaacgctttt gctttgttgggaaaacaacgttttgagcagtcagctgcgtttttcttactagcaggttca ctaaaagatgctatagaggtgtgccttgagaagatggaagacatccagttggctatggtc attgctcgtctgtatgagtcagagtttgaaacctctgtcacgtacacctccattctctat gaaaagatcttgggttgccagaaggatggaactggattcagctgtactaagttgcattct gatccatttctgagaagcattgcatactggataatgaaagattacacacgagcactggat acgttgttggaacaaacacctaaagaggatgatgaaaacccagttattgtcaaatcatgc aatcctgtcgtgttcagtttttacaactatcttcggacccaccctttgctcatccgaaga tacttcagctcaccagaaggaactctggccaccttaggtctaaaaactgagaaaagcttt gttgataaaattaatcttatagaaagaaaattattcttcactactgcaaatgctcatttt aaagtgggctgccctgtactagctcttgaagtcctttccaaaattccaaaaataagaaaa aagtccactgtagctggagaaaaagattcatccagtccttcaatccaggctgatgtttca gattccaaagccctacaggatggtgctggaagtggtgatgtagactggtcaaaacccatt tcagcttcctttggtttggagagtactgctgaatcttcagcacaatttgactggagtcaa ccagcagtaaaatttgacgatgagcctcttactcttgactggggtgaagacaaaaatggg tcagatgaagaagacaaggatgttgggataatgatgaaaaagtctgattctaagagtgaa gatgagaggacctcagacaccagcatggctcaaacaccacatggggaggtttctgaggca ggagacactgaggttgatgttattgctgagcaactgaagttcagagcttgtttgaaaatc cttatgactgaactgaggactttggctacaggttatgaagtagatggaggaaagctcaga tttcagctgtacaactggctggaaaaagagattgctgctatgcatgaaatatgcaaccac gatgcaggggacaaagactactgtaaaacatacaccaaagtaaatggggatctgcttgac cccgaagatattatggataagccagacattggctcctacgaacggcaccagatcgaaagg aggaggttgcaggcaaagcgagaacacgctgagaggcggaagtggtggctgcagaagaac caagcacttctccgagtttttctcagttattgtagccttcatggggcacaaggtggaggt ttagcatctgtgagaatggagttgaagttcttgctgcaggagtcacagcaggaaactact gtaaagcaacttcagtctcctcttccattacccacaacactaccattgctttctgcaagc atagcatccacaaaaactgtgatagctaatcctgtgctgtacttaaacaaccacatccat gatatactttacactattgtgcagatgaagtcgccaccacatcctaatattgaagatgtc aaggtgtacacacttcattctttagcagcttcactttctgcatccatttatcaagcacta tgtgacagccacagctacagcagtcaaacagaagcaaatcagtttactgggatggtttat caaggactgcttttgagtgatcgacgcagactgaggacagaaagcattgaagagcacgca actccaaactcatctcctgctcagtggcctggcgtgagttcacttatcaacctcttaagt tcagctcaggacgaagaccagccgaagttgaacatcctgctgtgtgaagctgtggtagcc gtgtacctgagcctcctgatccacgccctcgccaccaactcgtgcaacgagctgttccgg ctggcggcgcaccccctcaacagccgcatgtgggccgccgtcttcggcggcggggcgaag ctgctcgtgaagccgcggcggcagtcggagagcatcccagcacctcctcttccatcagaa gagatggataaacaccgccgtcgctttaatatgagaatgctggtgccaggaagaccagta aaagacagcaatgtaccaccacctgtacctgcagaaagaccctcttacaaagaaaagttt attcctccagagctcagcatgtgggactattttatggccaagccctttctccctttatca gacagtggggttatatacgactctgatgagagcattcacagtgatgaggaagaggacgac gctttcctctctgatgtgcagatccaggaacacacagatgccaattcttacagctgggct cttctacatctgacaatggtaaaattagttctgcacaacattaagaacttctttcccatt gctggtctggaattcactgatctgccagtaacatctccattgggcattgctgtaataaaa aatttagaacactgggaacagattcttcaagatagaatggaccagtttgaaggcccccca ccaaactacatcaatacttaccccagtgacattggtgtaggggcaggaccagctattctc cggaataaagccatgattgaacctgaaaacacacccttcaaatcaaaggattactcagct cttccagcaaaaaggctctggcattttcttgtgaagcaagaacttcttcaggagactttc ataagatatatattcacaaagaaaagaaagcagagtgagtctgtagaagatcgtgtggag caggtcaaacaaaactgcgtagcagaagatcacaaaaacaaggttgaagcagatcttggc taccctggaggaaaagcaaaaatcattcacaaagaatcagatatgataatggcatttgca gttaacaaggcaaacagcaatgaaattgttttggcgtctacacatgatgttcaagaactt gatatttcagctctactggctgctcagtcatttatatggattggggaagaatatgacaga gagtctaaaagttccgatgatgttgacttccgtggttctaccacaacgctggctccttca actgcaccatcgtttggagtgagtcagatacagccatctccatccatgccctggttaggc actgggcaaaccagcactggagctggtgtgctgattaaaagaaatctgaataacgtcaag agaatggcttcacatccagtccatcagtattatcttacaggagcacaagatggaagcgtg cgaatgttcgaatggacgagaccacagcagctggtgtgcttccggcaggctgggaatgcc agggtgaccaggatgtatttcaatgcccagggaaataagtgtggtgttgctgatggtgaa ggtttcctgagtatttggcaagtaaaccaaaccacctcaaatcctaagccctacctgagt tggcagtgccacagtaaaaccacaagtgactttgcatttataacctcttcaagtctagtt gctacatcgggacaatccaatgataacagaaatgtgtgcctctgggacaccttggtttca tctggtaacagtcttatacatgccttcacttgtcatgaccacggtgccacagtacttcag tatgcacccaagcatcaactgctcatttctggaggtaggaagggatatatctgcatcttt gacatcagacagaggcagatccttttcaccttccaagcacatgagtcagctgttaaggcc cttgcactggatccttctgaggattattttgttacgggctcagctgaaggcaacatgaag gtgtggagactgactggctacaatttaattcattcatttaaaaacgaacatgctaagcaa tcccttttcagaaatattggtgctggtgtcacccagattgagactgtgcaaggcaatcgt atcttctcctgtggagcagatggcacgctgaaaatgagggttcttcccaatgctttcaat gtaccttcaggcatttttgacattctgtag

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