Aphelocoma coerulescens (scrub jay): 138116375
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Entry
138116375 CDS
T10543
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04350
TGF-beta signaling pathway
acoe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138116375 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138116375 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138116375 (NEO1)
Cell adhesion molecules [BR:
acoe04515
]
Immunoglobulin superfamily
DCC/UNC5 family
138116375 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
SusE
TMEM154
TM_ErbB1
EphA2_TM
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
138116375
NCBI-ProteinID:
XP_068881736
LinkDB
All DBs
Position
10:complement(19984600..20150723)
Genome browser
AA seq
1455 aa
AA seq
DB search
MAARRARRLLGSLCIALLFAQPAPTGAAARSGSRSLLTESLVRTFTPFYFLVEPLDVLSV
RGASVIMNCSAHCETPPKIEWKKDGTFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEG
YYQCVATVDSLGTIVSRTAKLTVAGLPRFTSQPEPSSVRRGGSAVLGCEVTAELAPLLRW
ERDRQALAPDGRVLQLPSGALLITNASDTDAGLYRCALDGGGTPKYSDEAELKVLPDAEE
PQSLALLKPPSSLTRLPGQSAVFPCVAAGVPPPLIRWTRNEEELPTDGSGRFQLLAGGVL
EIRDVAEADAGTFTCIAESGNDTLEAQAELAVQVPPTFLKRPANIYAHESMDIVFECEVT
GKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQL
IILDLDVAIPTLPPTSLTSATNDHLAPATAGPLPSAPRDVVATLVSTRFIRLTWRPPASD
PQGDNLTYSIFYTKEGINRERVENTSRPGETQVMIQNLMPETVYVFRVVAQNRHGPGESS
APLKVATQPEVQLPGPAPNIRAFSGSPTSVTVTWETPLSGNGDIQNYKLYYMEKGQDTEQ
DVDVGGLSHTVSGLKKFTEYSFRVVAYNKHGPGVSTHDVVVRTLSDVPSAPPQNLTLEVR
NSKSILLQWQPPPAGTQSGQITGYKIRYRKVSRKSDVTESVGGTQLSQLIEGLERGTEYS
FRVAAMTINGTGPATDWVTAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQDV
VVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAV
TRPHSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKIT
DARFYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAH
GTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV
IEPVVGNRLTHQIQELTLDTPYFFKIQARNSKGMGPMSEAVQFRTPKASGSAGKGSRPVD
LGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVFCTRRTTSHQKK
KRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDI
TPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHS
LDPPHHHFHSGSLASPTRSFLHHQLSPWPLGSAMSHSDRADSTESVRNTPSTDTMPAAAA
VPSAELPEPEGPFLPAEEEPQGPPTAHVRPSHPLKSFAVPAVPPSGGPFDPALPSTPLLT
QQAPGHPVHAVKTASIGTLGRTRPPMPVVVPSAPEVQETTRMLEDSESSYEPDELTKEMA
HLEGLMKDLNAITTA
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggagagcccggcggctcctcggctccctgtgcatcgcccttctcttcgcg
cagcccgccccgaccggcgccgcggcgcggagcggctcccgaagcctcctcacggaatcg
ctcgtgagaaccttcactcctttctacttcctggtggagcccctggacgtgctgtcagtg
cgtggggcgtcggtgatcatgaactgctcggctcattgcgagacccctcccaaaatcgag
tggaaaaaggatggcactttcctgaacttggtgtcggatgaccgccgccagctgctgcca
gatggatctttattaattaacagtgtggtgcattccaagcataataaacctgacgaagga
tattatcagtgtgtggcaactgtggacagcctggggaccatcgtgagcaggacagcaaag
ctcaccgtggcaggtctgcccaggttcacgagccagccggagcccagctctgtgcgcaga
ggcggcagcgcggtgctgggctgcgaggtgacggcggagctggcgccgctgctgcgctgg
gagcgcgaccgccaggcgctggccccggacgggcgcgtgctgcagctgcccagcggggcc
ctgctcatcaccaacgcctcggacacggacgcggggctctaccgctgcgccctcgacggc
gggggcacccccaagtacagcgacgaggccgagctcaaagtcctgccagatgcggaggag
ccgcagagcctggcgctgctgaagccgccctcgtccctcacgcggctgccggggcagagc
gcggtgttcccctgcgtcgctgcgggagtcccacctcccctcatcaggtggacacggaat
gaggaggagcttcccacagatgggtctggccggttccagctgctggccgggggtgtcctg
gagatccgggatgtggccgaggccgacgccgggaccttcacctgcattgctgagagtggc
aatgacaccctggaggcccaggcagagctggcagtccaagttccccccacgttcctgaag
cgccctgcgaacatctacgcccacgagtccatggacattgtgtttgagtgcgaggtgacc
gggaaaccaaccccgaccgtgaagtgggtcaagaacggggacgtggtgatccccagtgac
tacttcaaaattgtgaaagaacataacctgcaagttttggggctggtgaagtctgatgaa
ggattctatcagtgcattgcagaaaatgatgttggaaatgcacaggctggagcccagctg
ataatacttgaccttgatgttgccatcccaacattacctcccacttcactgaccagtgcc
actaatgaccatctagcaccagcgacagcgggacccctgccctccgccccgcgggacgtc
gtggccaccctcgtgtccactcgcttcatccggctcacgtggcggccgccggcctcggac
ccgcagggagacaacctcacctactccatcttctacaccaaggagggcatcaacagggaa
cgtgtggaaaacacgagtcgtcctggagagacacaggtgatgatccagaacctgatgcca
gagacagtttatgtgttccgggttgtggcccagaacaggcacggccccggcgagagctcg
gcaccgctcaaggtggcaacgcagccagaggtccagctgcccggccccgctcccaacatc
cgcgccttctccggctcccccacctccgtcactgtcacctgggagacgccgctctcgggc
aacggcgacatccagaactacaaactctactacatggagaaggggcaggacacggagcag
gacgtggacgtggggggcctgtcccacacggtcagcgggctgaagaagttcaccgagtac
agcttccgcgtggtcgcctacaacaagcacggccccggcgtctccacccacgacgtcgtg
gtgcggaccctgtcagacgtccccagtgctccaccacagaatctaacgctggaggtacgg
aattccaagagcatcctgctgcagtggcagccccctcctgccgggacccagagtgggcaa
atcacggggtacaaaatccgctaccggaaggtttcccgcaagagcgacgtgaccgagagc
gtggggggcacccagctctcccagctcatcgaagggctggagcgaggcaccgagtacagc
ttccgtgtggccgccatgaccatcaacggcaccggccccgccaccgactgggtgacagcc
gagaccttcgagagcgacctggacgagacccgtgtgcccgaggtgcccagctccctgcac
gtgcggccgctggtcaccagcatcgtggtcagctggaccccgcccgagaaccaggacgtg
gtggtcaggggctacgccatcggctacggcatcggcagcccccacgcccagaccatcaag
gtggactacaaacagagatactacaccatagagaacctggaccccagctcccactatgtg
ataaccctgaaggccttcaacaatgtgggggaagggatccccctgtacgagagcgccgtg
acccggccccactccgacacttccgaggttgatttgtttgttattaatgctccatacact
ccagtgccagatccgtctcccatgatgcccccggtgggagttcaggcttccatcctgagc
catgacaccatccggatcacttgggcagacaactccctgcccaagaaccagaagatcacg
gacgcgcggttctacaccgtccgctggaaaaccaacatccctgccaacaccaagtacaag
actgcaaatgccaccactctgagctatctggtaacggggctgaagccaaacaccctctat
gagttctcagtgatggtgaccaagggcaggagatccagcacctggagcatgacagcacac
gggacaacctttgaattagtgccaacctcgccccccaaggacgtgaccgtggtgagcaag
gagggcaaaccccgcaccatcatcgtcaactggcagccgccctccgaggccaacggcaaa
atcacagggtacatcatctactacagcacggacgtcaacgccgagatccacgactgggtc
atcgagcccgtggtgggcaacaggctcacgcaccagatccaggagctcaccctggacacc
ccctacttcttcaagatccaggcccgcaactccaaggggatggggcccatgtccgaggcc
gtgcagttccgcacccccaaagcctcgggatctgccgggaaggggagtcgccctgtggac
ttgggcccagactacaaacccccactgggaggcagtaacagtccccatggcagccccacg
tcccccctggacagcaacatgctgctggtgatcatcgtgtccgtgggcgtcatcaccatc
gtcatcgtcgtcatcgtcgccgtcttctgcacgcgccgcaccacgtcccaccagaaaaag
aaacgagccgcctgcaaatccgtcaatggctcccacaagtacaaggggaactccaaagat
gtcaaacctcccgacctttggatccatcatgagaggctggagctcaaacccattgataaa
tccccagatcccaatcccatcatgacagacaccccgatccctcgcaactcccaggacatc
accccggtggataattccatggacagcaatatccatcagcggcggaattcctacagagga
cacgagtcagaggacagcatgtccacgctggcgggacgcaggggcatgaggcccaagatg
atgatgccttttgattctcagccgccgcagcctgtgattagtgctcatcccatccattcc
ctcgacccccctcaccaccatttccactccggcagcctcgcctctccaacccgcagcttc
ctgcaccaccagctcagcccgtggcccctgggctctgccatgtcccattcggacagggcc
gactccacagagtccgtccggaacacgcccagcacggacacgatgccggcggccgcggcc
gtgcccagcgcggagctgcccgagcctgaggggccgttcctgcccgcggaggaggagccc
cagggcccccccacggcccacgtgcgcccctcgcaccccctcaagagcttcgctgtgccc
gccgtgccccccagcgggggccccttcgaccctgccctgcccagcacccccctgctgaca
cagcaagctcccgggcaccccgtccacgcggtgaagacggcgtccatcggcaccttgggc
aggactcggccgcccatgcccgtggtggtgcccagcgcccccgaggtgcaggagaccacg
cggatgctggaggactcggagagcagctacgagccggacgagctgaccaaagaaatggcc
cacctggaaggactcatgaaggacctcaacgccatcaccacggcgtga
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