Aphelocoma coerulescens (scrub jay): 138116395
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Entry
138116395 CDS
T10543
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acoe02000
]
138116395 (TMC3)
03037 Cilium and associated proteins [BR:
acoe03037
]
138116395 (TMC3)
Transporters [BR:
acoe02000
]
Other transporters
Pores ion channels [TC:
1
]
138116395 (TMC3)
Cilium and associated proteins [BR:
acoe03037
]
Other cilia and associated proteins
Stereociliary proteins
138116395 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
DUF4577
Motif
Other DBs
NCBI-GeneID:
138116395
NCBI-ProteinID:
XP_068881777
LinkDB
All DBs
Position
10:4407000..4428153
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AA seq
1113 aa
AA seq
DB search
MAAAPGSPALRAAKSCKKQRTVKRQTGIYTYQEPPHSNSDDDVGEEKAESHDPEQIFQNI
QYQKEIMSNIRCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFIRLAY
NFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAPF
GSTVSKTIPKEHIASAQDLDTIWSLGGYLQYSVLFYGYYGRDRKIGKAGYRLPLAYFLVG
MAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRLFCAWDYLIGNPEAAESKAAAIVN
SIREAILEEQEKKKSKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQRLERTKKEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVDSMSVTDSDVNNNASNSTTSLATLSKDDNLTIPKVQMKRNGFVTSEEHRTQGLTVS
DSLVNQTISFNTQNPQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLCVRYLSDC
WCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAV
LTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSSSCGPFSGQEKIYDI
VSETIQNDFPTWFNTVITYISSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRMKIQT
ERTEDKKKVVQMAVARIQNLDANDKRPEQETDIISQQSSVRSSTPRKNGSVLNFESPVSK
GTRIQTISQSVPQTVPSTDVARPANATPTTSTSLTPAPSMSSVQKPRNDHITNRYPSVVH
RSASELCKTKPYTPVTFKKHTEDVHSDPLFRKAIRQVNSDALGAGPPVFLGCRPCATRYF
LVNENESRKKSLRSTSRLQRHLRKEESGDIIELYPHHIRRYVVRTPHQMYSPHPSEDEED
EEELEREFMSRSHRPRSLSDLRPAPRFYLGEHADGHILMSKDLARVHYKSWDDGFEMDLD
RPPYAYKKVHLNYPEPRVKPKSKQKLEQSLTESDSISIESSSDPQNSSNDQYIQVIHSKD
KYPKAGTKLTKKKTKNSVDLSVSEPSELVCSNV
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgccgggctccccggcgctcagagctgccaagtcgtgcaagaagcagcgc
acggtgaagcgtcaaacgggcatctacacctaccaggagccaccccacagcaactcagat
gatgatgtgggtgaagagaaggctgagagccatgacccagagcagatctttcagaacatc
cagtaccagaaggagattatgtccaatatccgctgccggccgtggccgatgaggcagaag
ctgagggcgctcaggcaggcgaaggagatcgtgctgaagtacgaagggaggctcacgaga
acaagaggttaccaggctgctggggcagagctttggaggaagtttattcgacttgcatac
aattttgtggtaatctttattccttgggaaatgagaataaagaaaatcgagagtcatttt
gggtctggagttgcctcttacttcatcttcctgagatggctgtttggaatcaatattgtc
cttaccataatgacgggagcatttgtagtcctaccagagctcctggccggagcaccgttc
ggcagcacggtcagcaagaccattcccaaggagcacattgcatccgctcaggacctggac
accatctggtcacttgggggctacctccagtactctgttctgttttatggctattatggt
cgtgacaggaagattgggaaagctggataccggctgcctcttgcctacttccttgttgga
atggctgtgtttgcttacagcttcatcattcttctaaaaaaaatggcaaagaactcaaga
atgagtttagcaagtgcctctgatgaaaattacactttctgctggagactgttctgtgct
tgggactatttgatagggaaccctgaggctgcagagagcaaagctgctgccatagtcaac
agcatcagggaagctatattggaagagcaggaaaagaagaaaagcaagaacttggcagtg
accataagcttaagaattattgcaaatatcctcgtgcttctctcccttgctggaagtatt
tacatcatctactttgttgtggatcgatcccaaaggttagagcgcaccaaaaaggaattg
actctttgggaaaaaaatgaggtaagcgtagtcgtgtcactgatcacaatgattgcaccc
tctgcttttgaacttgtggcagctctggagatgtatcatccaaggaccactcttcgcttc
cagcttgccagggttcttgtcctatacctgggaaacctctacagtttaatcattgctctc
ctggataaagtggacagcatgagtgtcactgactctgatgtgaacaacaatgcaagtaat
tctaccacctccttagcaactctttccaaggatgacaatttaaccattcctaaagtacaa
atgaagagaaatggctttgtcacatcggaagagcatcgcacccaaggcctcacggtctct
gactcactggttaaccaaacaatttcctttaacacccagaacccacaggaccagtgctgg
gagacgtatgttggtcaagagatgctaaagctttcaattatcgacatgattttcacagtc
gcaagcatcctgctaattgattttttccgtggactgtgtgtccggtacttgagtgattgc
tggtgctgggatctagaaagcaagtttccagaatatggagaattcaaaatcgcagagaat
gtattgcatctggtctacaaccaaggaatgatctggatgggagctttcttttcaccgtgc
ttgccagcattcaacgtactgaagttgattggactcatgtacctgaggagctgggctgtg
ctgacatgcaatgtaccacatcagcaggttttcagagcatctcgatccaataatttctac
ttggccatgttgctgtttatgttgttcttgtgcatgttaccaacaatttttgctattgcc
cgatacaagccatcctcaagctgtggccccttcagtggtcaagaaaaaatatatgatatt
gtttctgaaacaattcagaatgattttcccacgtggttcaacacagtgattacttacatc
agcagtcctgtggttgtcctccctgcactactactgttattcatgctaatctactacctg
caaagtattgcaagatcattaaaattcaccaacaatcaactgagaatgaagatacaaaca
gaaagaactgaagataagaaaaaggtggttcagatggcagtagccagaatccaaaatctg
gatgctaatgacaaaagaccagagcaagaaactgatattatcagccagcagtcttctgtt
cggtcctcaacaccccgaaagaatggcagcgtcttgaactttgaatctcccgtgagcaaa
ggcaccagaatacaaaccatttcccagtctgtgccccaaactgtgccatcaactgatgtt
gcaagacctgccaacgcaactcccacaacttcgacctctttaacaccagctccctccatg
tcaagtgtacagaaaccaagaaatgatcatatcacaaacagatacccaagtgttgttcac
aggagtgcaagtgagctgtgcaaaacaaagccctacacaccagtgactttcaaaaagcac
actgaagacgttcattctgaccctctcttcagaaaagccattcggcaggtaaattcagac
gcccttggggcagggcctcctgtttttttgggatgtagaccatgtgctacaaggtatttt
ctcgtcaatgaaaacgagtcccgcaaaaaatcgctccgttccacctcccgactccaaagg
catctcagaaaggaggaatcgggagacattattgagttgtacccacaccacatcagaaga
tacgtggttcgaacaccacaccagatgtattccccccatcccagtgaagatgaggaggac
gaagaagaacttgagcgagaattcatgagcagatcccatcgccctcgctcactgtctgac
cttcgcccagcaccacggttttaccttggggaacatgctgatggccacattctaatgagc
aaagatctagccagagtgcattacaaatcctgggatgatggttttgagatggacctggac
aggcctccatatgcttacaagaaagtgcacctgaactatcctgagccacgtgtgaaacca
aaatcaaagcaaaagctggagcaatctctaacagagtctgattccatttccattgaatcc
agcagtgatccgcagaacagcagcaatgaccagtacatccaggtcattcatagcaaggac
aagtatccaaaagctgggacaaaactcaccaaaaagaaaacaaaaaacagtgttgatcta
agtgtgtctgagcctagtgaactggtgtgctcaaatgtctga
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