Aphelocoma coerulescens (scrub jay): 138116410
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Entry
138116410 CDS
T10543
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
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GFIT
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NCBI-GeneID:
138116410
NCBI-ProteinID:
XP_068881805
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Position
10:1995245..2204938
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AA seq
1126 aa
AA seq
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METNTGVSSELRPCRGGGQLRARPPAENNAQVAELSPAMRLPVLCALVTLLSLSRCRAIS
FPEDEDPINVVDYHYSRQYPVFRGRPSGNESQHRLDFQLMLKIRDTLYITGRDQVYTVNL
NEVPKSEVTPSKKLTWRSKQQDRENCAMKGKHKDECHNFIKVFVPRNDEMVFVCGTNAFN
PMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFADGKLYSATVADFLASDAVIYRSM
GDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNTLGKAVYSRVARICKND
MGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIEINGVPTVVGVFTTQLNS
IPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTS
IDFPDETLSFIKSHPLMDSAVPSVTEEPWFTKTRVRYRLTAIAVDHAAGPYQNYTVIFVG
SEAGVVLKILAKTRPFSLNDSILLEEIEAYNHAKCNAESEEDRRVISLQLDRDHHALFVA
FSSCVVRIPLSRCERHGSCKKACIASRDPYCGWLDHEACGRVTPGMLFSLFVSYNHSTGG
YVQDVEYGNTAQLGDCHEILPTTATPDYKIFGDPTSDMEFSSASITTMASIPVISPKVIG
SWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEVQSGESSQMVHMNVLITCVFAAF
VLGAFIAGVAVYCYRDIFVRKSRKIHKDAESAQSCTDSSGSFAKLNGLFDSPVKEYQQNI
DSPKLYTNLLTSRKELPPNGDTKSMMMDHRGQPPELAALPTPESTPVLQQKTLQAMKSQS
DKAHGNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFSNSNAH
KADKKVQHIDHPLTKSSSKRDHRRSVDSRNTLNDFLKHLNETTNNPKAIMGDIQVAHQTL
MLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPAVPMTSLERQRGYHKN
SSQRHSISALPKNLNSPNGVLLSRQPSINRGGYMAPTAGTKMDYMQGTPVSVHLQPSLSR
QSSYTSNGTLPRTGIKRTPSLKPDVPPKPSFVPQTTSVRPLNKYSY
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaatactggagtcagttctgaattacgcccgtgccgcggcgggggccagctc
cgcgcccgccctcctgccgaaaacaatgctcaggtagctgagctgtccccagccatgagg
ctccccgtgctctgtgccttggtgacgctgctcagcctgtcccgctgccgcgccatcagc
ttccccgaagacgaggaccccattaacgtcgtggactaccactattcaaggcaatatcca
gtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaactaatg
ttgaaaattcgagacacactttatatcactggcagggaccaggtttatactgtaaactta
aatgaagttccaaaatcagaagttaccccaagcaagaaattaacatggagatcaaagcag
caggacagagagaactgtgctatgaaaggcaaacataaagatgaatgccataacttcatt
aaagtctttgttccaagaaatgatgagatggtgtttgtctgtggaacaaatgcatttaac
cccatgtgcagatactatcggttgaatacattagagtatgatggggaggaaatcagtggt
ttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgatggaaaa
ttgtattcagcaacagtagcagatttcctggcaagtgatgctgttatttatcgcagcatg
ggggatggatctgccttaagaacaataaagtatgattccaaatggataaaagagccacac
ttcctccatgccatagaatatgggaactacgtttatttcttcttccgagaaattgctgtc
gagcacaacactttaggcaaggctgtgtattcccgtgtggcacgcatctgcaaaaatgac
atggggggctcccaaagggtcctggagaaacactggacatcctttctgaaagctcggctc
aactgctcagttcctggggattcattcttctactttgatgttctgcagtccatcacagat
ataatagaaatcaatggagtgcccaccgttgtcggtgtattcaccacacagctcaacagc
atccctggttcagcagtgtgtgctttcagcatggatgacatcgagaaagtcttcaaaggg
agatttaaagaacaaaagactcctgactctgtttggacagctgtacctgaagacaaagta
ccaaagccaagacctggctgctgtgcaaaacacggcctagcagaggcttacaaaacctcc
attgatttcccagacgaaacgctctccttcatcaaatctcatcctttgatggactcagct
gttccctcagtcactgaggagccctggtttaccaaaacacgtgtcagatacagactgaca
gcaattgctgtagaccacgccgctggaccctaccagaactacacagtcatatttgttggc
tctgaagcaggagtagtacttaaaatcttggcaaagaccaggcctttttctttgaatgac
agcatattactggaagagattgaagcatataatcatgcaaagtgcaatgcagagagcgag
gaggacagaagagtcatttccctgcagctggacagagaccaccatgctctgttcgtggcg
ttctccagctgcgtcgttagaattcccctgagtcgctgtgagcgccacgggtcatgtaaa
aaggcatgtattgcttcacgggacccgtactgtggctggttagaccatgaggcgtgtgga
agagtgacaccaggcatgctgttctctttgtttgtttcatacaaccacagcactggagga
tacgtacaagatgtcgaatatggcaacacggcgcagcttggggactgccatgaaattttg
cctactacagctacaccagattacaaaatatttggcgacccaacatctgacatggagttc
tcctcagcttccattaccacaatggcaagtatcccagttatatcacctaaagtgattggt
tcctggaaacctaaagtgactggctctcggaaatttgtagttcaagatgacccaaacact
tctgattattctgatccattatcaggtgtcccaaagggtgtgaggtgggaagtgcaatca
ggagagtccagccaaatggtacatatgaatgtcctaatcacttgtgtctttgctgctttt
gtcctgggagcctttattgcgggagtggccgtttactgttaccgggatatctttgtgcgg
aaatccaggaaaatacacaaagacgcggaatcggctcagtcctgcactgactccagcggg
agctttgccaaactgaacgggctgtttgacagtcctgtcaaggaatatcagcagaacatt
gattcacccaaactgtacacaaacctgctgaccagcaggaaggagttgcctccaaacggt
gataccaagtccatgatgatggaccacaggggacagcctccagaattagctgcacttcca
actcctgaatccacacccgttcttcaacaaaagactctgcaggctatgaaaagtcagtca
gacaaagcgcatggtaacctcaatgcttcacgaaaggaaaccccactaaaaagccctcag
ttttttccttccagtcctccaccccactctcctctaagtcatggacatattcctagtgct
attgttcttcccaatgctacccatgactacaacacatctttctcaaattctaatgcgcac
aaggcagacaaaaaggtgcagcatattgatcatccacttacaaaatcatccagcaaaaga
gaccacaggagatctgttgattccaggaacaccctgaatgattttctgaaacacttaaat
gaaactactaataatcccaaagcaattatgggagatattcaagtggcccaccagacttta
atgctggatccaatgggcaatatgtctgagatcccacctaaggttcccaacagggaggcg
tctttatactctccaccatcgactcttccgagaaacagtcccacaaaacgagtggacgtt
cccaccactcctgcagtaccaatgacctctttggaaaggcagaggggttatcacaaaaat
tcttcacagaggcactcaatatctgcccttcctaaaaacttaaactcaccaaatggtgtt
ttgttatccagacagccaagtattaatcgtggggggtacatggctcccacggcaggcaca
aagatggactacatgcaagggacgcctgtcagcgttcacctccagccttccttgtccagg
caaagcagctacacgagcaacggcaccctgcctcgcacaggaataaagaggacaccctcc
ctaaaacccgacgtgccaccaaaaccctcattcgtcccgcagacgacatcagtcagacca
ctgaacaaatacagctactag
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