Aphelocoma coerulescens (scrub jay): 138116561
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Entry
138116561 CDS
T10543
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Proteoglycans [BR:
acoe00535
]
Cell surface proteoglycans
Others
138116561 (CSPG4)
Lectins [BR:
acoe04091
]
C-Type lectins
Others
138116561 (CSPG4)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138116561
NCBI-ProteinID:
XP_068882102
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Position
10:19152922..19178885
Genome browser
AA seq
2355 aa
AA seq
DB search
MGARGGIATVLLLLLLAGHPQPLSAGPPAGASFFGDSFVEMPLADASRTVRLHLQLFTSQ
GNGLLFLAAGQPDHLLLQLQAGRLQARLQLGSEEVTLQSPAGLQLNNLAVHNVELLVEDG
RMTLTIDGLFNSSTDIAGPERELDIQHGLYAGGTGSLDLPYLAEASPPFRGCLHLVTFNG
LDVLSRLSADGSSKTFHHVQEGCSTQFSAEPDDPFGFPGPHSYIAFPTWDARQEATIEFV
ITTSITQAPLIYHAGLENDFFYLEISNGRLRGFVEKGNGVIVLHNNVFISDEQQHYVKVH
TDIHKFEILIDYYASSTSNRGINNYLDLQGNLFIGGMDEKALQRLREHHLSFISLWTMTN
HSFVGCLEDLRINLQRRSLQDAVITKDITAGCGKQDHYWDYEEVYEQDEASTSPPPNVFS
GAPGLVVEPCRPDSSFPPAFANISRLLHVSPLIVSEGGMAYLEWKHAQPTVDLSLANIRQ
SQILFSVTNDPRHGQLELDIPGSRSRRKFTLLDIVNRKVRYIHDGSEGPMDQLMLEVTVT
TQQGVPECLRQGQVYLLPIMINPVNDAPQVIFPRGNHMTILKHTRKHLTTDILQVLDDDS
SCDGLEFQLHGQQMEEGYVELDFHPGVPIEEFSCRDLEAGSVVYVHQGGTNLQLTLQVSD
GTVPSPIATLRILAIDPDIRLLNNTGLSLSQGGAARITTANLSVETNAVEQRVSILYVLT
EPLKYGEVQKQGNVGGEWKKVESFHQQDLEQGRIQYFSTDAEHRLEDSVEEVRFKVQVGQ
KLLPNNTFLIRIKRATIKMRTMAPLQMKNKRHRNITSKELEAMLEDPNSAPVPFHYMIIQ
APKKGNLELLGNRLTEGFGFTEEDLQGNHLSYSVTIRNSQQAEDFFQFRVHAGEQHSPVY
TYRISIGGDPDAPTLTNVLLTVPEGGQAVISKEHLFVQSVNSMDYVYEVIEGPAHGRLAW
AASHGWASREEITEFTNDDILQRRLLYQHDDSETLEDDIPFVAIRQGEGSAEPEAEEVRG
VFRVSIQPVNDHSPVRAVNRVFNVVRNGQHLLTTDDIAFTDKDSGFSDAQLVLARKDILF
GSIVSVDDRSHQVYRFTQDDLRKKKILFVHSGADRGWIQLQVSDGLHQTTALLEVQASDP
YIKIVNNTGLVIHQGTRGSIDSSVLSLETNMDIRSDEEIRFLITTPPRWGTVMRGEQPVM
AFSQRDLLAGEISYHHNGSRNTRDELQFTVEANEVAVEDTLAISVFLDTHPSPLSIVNHK
EIYVFQGEAAGIKEEDLLVTHEEIPSQDIVYLVSSPPASGFLAMLQHSQDVNEQPSLDPI
QSFTQEDINSGRVLYLHSKPNEERDQFVLDITARSADPLEGVVVSLVVLPITVPLDVHNI
TVPGGGSATLSSGILRISNAYYPALGMEFRVLEPPQFGTLLNSQRPEQGGLHSFTWSEVE
SQQIQYRQDGPRSLTDSFTILANASQVSRQSQPGTLFITILPRSTKGPRLKVNAGLQLRE
GATAVLSPHILSAEDEDSPAEDVTYSIQPPANGKVVLRSAPNAEVQRFTQAQIDNGLILF
VHQGPLDGGFAFDLWDGENLSPGHFFLVRAQREPVISLARKQSLTVCPGALQPITSQNLQ
AVSNSPASSTTLYYSIEQAPRLGRLTTSQGEEIRNFTQAQVDSKLIFYQHEMPDKPFWLA
QDAIRFRVVTPTTISDSFILLVLISFEEKCPQRLTQLWKNAGLQLTRAQQAEIDTLVLDA
SNLLSQILVPERAGYDVVFLVTEPPVHGQLLVADVPLEQSRPFFLQSDLAARRLVYAHGG
DSISKDHFSFKAWLQPREQRSVRPPQDGVVISEAFNITVTSSTKSPRVVKRQEVLQVPPG
SVVTLSQEYLAVADPLVSPQDMVYSILQRPLAGHLASAHNPREPISRFTQADVNAGRVVF
VATGSRAPGSLALRLSSGHHPPIQTSLEIEVLPALSTTASPALLEVPQDLNRAPVSHHHL
LGAAPRGAGNVLYRITRDPRFGQLQVNQKPSRGFSQKQLDHREVTFTFSDLTSPEDNFQF
VAVSRAGNRTGVVNVTVRAAVKIRPGSLWPRGTTALLDTSVLDASELANHTKSVPVFKVR
RAPRASRLVRVSRDPGQLTSPIETFSQSELERGLVGLEVLDAGDTQQPLQWDSFVFELVA
AGVPPALASLEYSTEPYNASKSYGVTLLTVPLAASPPVPHGTARSSPNASELGMPPTAWL
APSATTSPSPGAGGTFLSFIEANMFSIIIPICLILLLLALILPLLFYLHKRNKTGKHHVQ
GAPAPKAKNGAVPDHETFRRTDPSQGIPLTTVTTLEGKGTGPPPPGTGSGAPPDPELLQY
CRTSNPPLKNNQYWV
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcccgaggtggcatcgccacggtgctgctgctgctgctgctggccggccacccc
cagcccctcagcgcgggacccccggccggagcctctttctttggcgacagctttgtggag
atgccactggcagatgcctcgcgcacggtgcggcttcacctgcagctgttcaccagccag
gggaatgggctgctcttcctggctgctggccagcccgaccacctcctgctccagctgcaa
gctggccgcctgcaggccaggctgcagttgggctcggaggaggtgaccttgcagtcccca
gcagggctgcagctcaataacctggcagtgcacaatgtggagctgctggtggaagatggc
aggatgacgctgactatcgatggcctcttcaacagctccacagacatcgcagggccagaa
agggagctggacatccagcatggcctctatgctggtgggacaggcagcctggacctgcca
tatcttgctgaggccagccctcccttcagaggttgccttcacttggtgacattcaatggc
ctggatgttctctcccgtctgtctgctgatggcagctccaagaccttccaccacgtccag
gaagggtgcagcacacagttctctgcagagcctgatgacccattcgggttcccggggcca
cactcctacattgctttccccacgtgggatgcgaggcaggaagcgaccattgagtttgtg
ataacgacgagcatcacccaggcacccctcatctaccacgcagggctggagaatgacttc
ttctacctggagatctccaatgggcgcctgcgagggtttgtggagaaggggaacggtgtc
atcgtcctgcacaacaatgtcttcatcagcgacgagcagcagcactacgtcaaagtccac
acggacatccacaagtttgagatactaatagattactatgcttcatccacatccaaccgg
ggcatcaacaactacctggaccttcagggaaacctcttcattggtggtatggatgaaaaa
gctttgcaaaggctgagggaacaccatctttcattcatctcattgtggaccatgaccaac
cactcgtttgttggctgcttggaggacctgcggataaacctgcagaggaggagcctgcag
gacgccgtcatcacaaaggacatcacagcaggctgtgggaagcaggaccactactgggac
tatgaggaggtgtatgagcaggatgaggcatccacctctccacctccgaatgtcttttca
ggagcaccaggcctggtggtggaaccgtgccggcctgacagcagcttccctcccgccttt
gccaacatcagcaggctgctgcacgtcagccccctcattgtctctgaagggggcatggcc
tacctggagtggaaacacgcccaaccaacggtagatttgagcctggccaacatccgtcag
tcccaaatcctcttcagcgtcactaatgaccccaggcatggccagctggagctggacatt
cctggctccaggagcagaaggaagttcaccttgttagacattgtgaatcgcaaagtcaga
tacatccatgatggctccgaggggcccatggaccagctgatgctggaggtgacagtgacc
acccagcaaggggtcccagagtgcctgcggcaggggcaggtgtacctgctgcccatcatg
atcaaccctgtcaacgatgccccacaggtgatctttccccgtgggaaccacatgacaatc
ctgaagcacacacggaaacacctgaccaccgacatcctgcaggtcctggatgatgattca
tcctgcgatggccttgaattccagctgcatggtcagcagatggaggagggttatgtggag
ttagacttccaccctggagtgcccattgaggagttctcctgcagagacctggaagctggc
agcgtagtctatgtgcaccagggtgggacaaacttacagctcaccttgcaggtgagtgat
ggcacagtgccaagccccattgccaccctgaggatcctcgccattgatcctgacatccgc
ctgctcaataacaccggcctctccctctcccaaggaggggccgcacgcatcaccacagcc
aacctgtcagtcgagacaaacgctgtggaacaacgggtctccatcctatatgtcctcacg
gagccgctgaagtatggtgaggtccagaagcaagggaacgtgggaggggaatggaaaaaa
gtcgagtccttccaccaacaagacctggagcaagggcgcatccagtattttagcacagac
gcagagcaccggctggaagatagcgtggaggaggtgagattcaaagtccaagtggggcag
aagctcttgccaaacaacaccttcctcataaggattaaaagagctaccattaagatgagg
accatggctcccctccagatgaagaataagcggcacagaaatatcaccagcaaggagctg
gaggcaatgttggaagatccaaattctgccccagttcccttccactacatgatcatccag
gctcccaaaaagggaaacctggagctgcttggcaacaggctgaccgaaggctttggattt
accgaagaggacctgcagggaaaccacctgagctacagcgtgaccatcaggaactcccag
caagctgaggacttcttccagttccgcgtccacgctggtgagcagcactcacccgtctat
acttacagaatcagcattggtggggaccctgatgcaccaacattgaccaacgtgctcctg
accgtgccggaaggtggacaggccgtcatctccaaggaacacttgtttgtgcagagtgtg
aacagcatggactatgtctatgaggtgattgaggggccagcacatgggaggctggcctgg
gctgcatcccatggctgggcctccagagaggagatcacggagttcaccaatgacgacatc
ctccagcgccggttgctgtaccagcacgatgactccgagacactggaggatgacatcccc
ttcgtagccatcaggcagggtgagggcagcgccgagcctgaggccgaggaggtgaggggc
gttttcagggtctccatccaacccgtcaatgaccacagccctgtccgggcagtgaacaga
gtcttcaacgtggtgcgcaatgggcagcacctgctgaccactgacgacattgccttcact
gacaaagactccggcttctccgatgcgcagctggtgctggccaggaaggacatcttattt
ggcagcattgtgtctgtcgatgacagaagccaccaggtctatcgattcacacaggatgat
ttgaggaagaagaagatcctctttgtccattctggggctgaccggggctggatccagcta
caggtctcagatggcctccaccaaaccacagccctcctggaagtgcaggcatcagacccc
tacatcaaaatagtcaacaacaccggtctggtcatccaccagggcacccgagggagcatt
gactcctctgtcctcagcctggagaccaacatggacatcaggtcagatgaagagatacgg
tttctgataaccacccccccaaggtgggggactgtcatgagaggggagcagccggtcatg
gccttctcccagagggacctgctggcgggagagatctcctaccaccacaacgggagcagg
aacactcgggatgagctccagttcactgtagaagcaaatgaggtggcagtggaggacaca
ctggccatcagtgtgttcttggacacccatcccagccccttgagcatagtcaaccacaag
gagatctatgttttccagggggaagcggctgggatcaaggaggaggacttactggtgacc
cacgaagagatcccttcccaagacatagtctacctggtgagcagccccccagcctccggc
ttcctggcaatgcttcagcacagccaggacgtgaacgagcagcccagcctggaccccatc
cagtccttcacccaggaggacatcaacagtggcagagtcctctacctccactccaagccc
aatgaggagcgtgaccagtttgtcctggacatcacagcccgcagtgcagaccctctggag
ggggtggtggtcagcctggttgtgcttcccatcactgtccccttggatgtccacaacatc
acggtgccaggaggtggctctgctaccctctcctcgggcatcctccgcatttccaacgcc
tactacccagctctcggcatggagttcagggtgctcgagcccccccagttcggcaccctc
ctgaacagccagcggcccgagcagggcgggctgcacagcttcacctggagcgaggtggag
agccagcagatccagtacaggcaggacggcccccgatccctcaccgacagtttcaccatc
ctggccaacgcctcccaggtatcccgacagagccagcccggaaccctcttcatcaccatc
ttgccccgcagcaccaaggggccgcggctgaaggtcaacgccggtttgcagctgcgggaa
ggtgccacggctgttctcagcccccacatcctgagtgccgaggatgaggactccccagcg
gaagacgtgacctattccatccagcccccagccaacgggaaggttgtgctgaggtcagca
cccaatgctgaggtccagaggttcactcaggcccaaatagacaacggcctcatcctcttc
gtgcaccaaggacccctggatggcggctttgcctttgatctgtgggatggcgagaacctc
tctcctgggcacttcttcctcgtcagggcccagagagagcccgtcatcagcctggccagg
aagcagagcctcactgtctgcccaggtgccctgcagcccatcaccagccagaacctgcag
gcagtgagcaacagccctgccagctccaccactctgtactacagcatcgagcaagccccg
cgcctgggcaggctgaccacctcacagggggaggaaatcaggaacttcacccaagcccag
gtggacagcaagctgattttctaccagcacgagatgccagacaagcccttctggctggcc
caagatgccatccgcttccgtgtggtcactcccacgaccatctcagattccttcatcctc
cttgtcctgatctcctttgaagaaaagtgtccccagcgcttgactcagctttggaaaaat
gcaggtctgcagctcacaagggctcagcaggctgagattgacaccttggtgttggatgcc
tccaacctcctgagccaaatcctggtccctgagagggctggatatgatgttgtcttcctg
gtgacggagccaccagttcatgggcagctcttggtggccgatgtgcctctggaacagtca
cggccatttttcctgcagtcagacctggcagcgaggcgtttggtgtacgcccatggtggg
gacagcatctccaaagaccatttcagttttaaggcttggctccagccccgggaacagcgg
tctgtccgtcctccacaggatggggtggtcatctctgaagcgttcaacataacagtgacc
agcagcaccaagtcaccacgggtggtgaagcggcaagaagtgctgcaggtcccaccaggc
tccgtggtcaccttgtcacaggagtacctggccgtggcagacccactggtgtccccacag
gacatggtgtacagcatcctccagagaccccttgctggccacctggccagcgcacacaac
ccacgggagcccatcagccgcttcacccaagcagatgtcaatgctggccgtgtggtgttt
gttgccactgggagccgtgccccagggtccttagccctgaggctctccagtggccaccac
ccacccatccagacctctctggagatcgaggtgctgcctgccctgagcaccactgccagc
ccggcactgctggaggtgccccaagacctgaacagggcccctgtgtcccaccatcacctg
cttggtgccgcaccacgaggggcaggtaatgtcctgtacaggatcaccagggaccccagg
tttggacagctgcaagtcaaccaaaagccatcacggggcttctcacagaagcagctggat
cacagagaggtgacgttcaccttcagtgacctcacatcgcccgaggacaacttccagttc
gtcgccgtatcgcgggcaggaaacaggaccggggtggtgaacgtgactgtccgtgctgcg
gtgaagatccgaccgggcagcctgtggccccgaggcaccacagccctcctggacaccagt
gtccttgatgccagtgagctggccaaccacaccaagagcgtcccagtcttcaaggtccgc
agggcgccccgtgccagccgtcttgtgagggtatccagggacccgggacaactcacctcc
ccgatcgaaaccttcagccagagcgagctggagcgagggctggtggggctggaggtgctg
gatgctggggacacccaacaacccctgcagtgggacagctttgtcttcgagctggtggct
gccggcgtgccaccagcactggcatccctggagtacagcactgagccctacaacgcctca
aaatcctatggtgtcaccctgctcacggtcccgctggcagcctcacccccagtgccccac
ggcacggcacggagcagccccaatgccagcgagctgggcatgccccccactgcctggctg
gcccccagcgccaccactagccccagccctggggcagggggcaccttcctcagcttcatt
gaagccaacatgttcagcatcatcatccccatttgcctcattttgctcctgctggccctc
atcttgcccctgctcttctacctgcacaagcgcaacaagacggggaagcaccacgtccag
ggtgctcccgcccccaaggccaagaacggggccgtgccagaccacgagaccttccggagg
acagaccccagccaaggcatccccctaacgactgtcaccactctggagggcaagggcacg
ggccccccgcccccgggcacaggctctggggcaccgccagaccccgagctcctccagtac
tgccggacttccaaccccccactgaaaaacaaccagtactgggtgtga
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