Aphelocoma coerulescens (scrub jay): 138116702
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Entry
138116702 CDS
T10543
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138116702 (CHD2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138116702
NCBI-ProteinID:
XP_068882361
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Position
10:7186595..7272769
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AA seq
1829 aa
AA seq
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MMRNKDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSESNSSSESSESQSESES
ESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEA
SSESENESPKRRRQKQLKRKIKWKREVSAGEEDEDGGEQGTSGESEPEPKKIKARRPVQR
RTVAKTGVKKPHKIQRGKRKKPDSSEDDDDDEDDETPKRQTRRRAAKNVSYKEDDDFETD
SDDLIEMTGEGADEQQDNSETIEKVLDIRLGKKGAIGASTTVYATEANGNPSADFDPEKD
EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVE
YFNCQQELASELNKQYQIVERVIAVKTSKSATGHSDFPANSRKTSSNDPEYLCKWMGLPY
AECSWEDEALISKKFQHCIDSFNSRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGENL
ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL
STLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKD
KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMS
ALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGLET
LQSLVRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIK
GEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNP
FNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFK
VANFATMEEEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQ
TNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIK
AYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENPGEGKG
PGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPSDPEERKKYRLTCRVKAAHFDVDW
GVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKLL
KKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQSEEGEVKED
GLDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKDKKEKPKGGEAKSGSKGKRS
QGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEH
TRNCLLKIGDRISECLKAYTDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKEDMSSMKKPFRPEPSGSSRDSVMSQSHVPHNPHSQKIHMPPSHTQQQMHGHP
RDNYGHPNKRHFSNTDRGDWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGDRRSR
GDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQNYHQQ
DFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGDYKQPLPPSHPAVSDPRSPPSQKSPHDS
KSPLDHRSPLDRSLEQKNNPDYNWNIRKA
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcactcggcatccgaagaagcctctggctctgactctgcaagccagtctgaaagtgag
cagggcagcgagtcaaacagcagctccgagtcctctgagagtcagtctgaatctgaaagt
gaatcgactggttccaaatcccaacagacccctcctgaaaccaaagaaaaaccagcctct
aagaaggaaaggatagcagatgttaaaaagatgtgggaagaatatcctgatgtttatggg
gttaggaggtcaaaccgaagcagacaagaaccgtcacgatttaatataaaagatgaggca
agtagcgaatctgaaaatgagagcccaaaaagaagacgccagaagcagttgaaaagaaaa
attaaatggaaaagagaggtctctgctggagaagaggatgaagatggaggggagcaaggc
accagtggagagagtgagcctgaaccgaagaaaattaaagcaagaaggcctgtccagagg
agaacagtggccaaaactggtgttaaaaagccccacaaaatccagcgtgggaagaggaag
aaaccagactcatctgaagatgatgatgatgatgaagatgatgagacccccaagagacaa
actcggcgaagagcagccaaaaatgtcagctacaaagaggatgatgattttgagacggat
tctgatgacctgatagagatgactggggaaggtgctgatgaacaacaagacaacagtgaa
actattgagaaagtcttggacatcaggcttggaaaaaagggagccattggagcttccacc
acggtgtacgcaaccgaggccaacggcaaccccagcgccgacttcgacccggagaaggat
gagggggaagttcagtacctgatcaaatggaagggctggtcatacatccacagcacgtgg
gagagcgaggagtccttgcagcagcagaaagtgaagggcctgaaaaagctcgaaaacttc
aagaaaaaagaggaggagatcaagcaatggctgggcaaggtatcacctgaagatgtagaa
tatttcaactgccaacaagagctggcttcagagctgaacaaacagtatcaaatagtggag
agggtaattgctgtgaagaccagcaagtctgccacgggacattcagatttcccagcaaac
agtcgcaaaacatcctcgaatgaccccgaatacctgtgtaagtggatggggctgccctat
gctgagtgcagctgggaagatgaggctctgatcagcaagaaatttcagcactgcatcgac
agcttcaacagtcgtaacaactccaagacgattcccacccgggactgcaaggtgttgaag
cagaggccgaggtttgttgccttgaagaagcagccctcgtacatcggtggggagaacctg
gagctgcgggattaccagctggagggcctcaactggctcgctcactcctggtgcaagaac
aacagcgtgatcctggctgatgaaatgggactaggcaagacaattcagacaatatcattc
ctgtcctacctgttccatcagcaccagctgtacggccctttcctggtggtcgtgcccctg
tccaccctcacctcctggcagagggagtttgaagtgtgggcgcccgagataaacgtggtg
gtttacattggagacctcatgagcaggaacatgatacgtgaatatgagtggatccattct
cagtctaaaagattgaaattcaatgcacttatcacaacatatgagatcctcctgaaggat
aagactgttctgggaagcattaactgggcctttctaggcgtggacgaagcccatcggttg
aaaaatgacgactccttgctgtacaaaacattgattgatttcaagtccaaccacaggctg
ctgatcaccggcaccccgcttcaaaactcactcaaggagctctggtccctgctgcacttc
atcatgccagagaagtttgaattctgggaggattttgaagaggaccacgggaaaggtaga
gagaatggctaccagagccttcacaaagtcctggagccgtttctcctgcgcagagtgaag
aaggatgtagagaaatctttgccagccaaagtggagcagatcctccgggtggaaatgtct
gctctgcagaaacagtattacaagtggattttgacaagaaactacaaagctctttcaaag
ggaacaagggggagcacatctggtttcctgaacattgtgatggaattgaaaaagtgctgc
aaccattgctaccttatcaaacctcctgaggaaaatgagagagagaatggccttgagacc
ctgcagtctctggtcaggagcagtggaaagctgattctcttggataagctgctgaccagg
ctgcgggagagaggcaacagagtgctgatcttctcccagatggtgaggatgctggacatc
ttggcagagtacctgactatcaaacactacccttttcagcgcttggacggctcgatcaag
ggggagatccgaaagcaggcgctggatcacttcaacgccgacggctccgaggacttctgt
ttcttgttgtcaacacgagctggggggctgggaataaatttggcctctgctgatactgtt
gttatctttgactcggactggaacccccaaaatgatcttcaggctcaggcccgagctcac
cggatcggacaaaagaagcaggtgaatatttaccgcctggtcacaaaggggacagtggag
gaggagatcattgagagagccaagaagaaaatggtgctggatcatttggttatccagcgt
atggacaccactggccggactgttctggacaacaactctgggagatccaactcaaatccc
ttcaacaaagaggagctgacagctattttgaagtttggagctgaagatcttttcaaggag
cttgaaggggaagagtcagagcctcaggagatggacattgatgagattctgcgtctggct
gaaacacgggagaatgaagtgtccaccagtgccaccgatgagctgctctcccagttcaag
gttgccaactttgcaaccatggaggaggaagagacagagctggatgagaggtcccagaag
gactgggatgatatcattccagaagagcagaggaaaaaggtggaggaggaagaaaggcag
aaagaattggaagaaatctacatgctgcctcgaatccggagctcaactaaaaaggctcag
acaaatgacagtgaatcggatgcagaaaccaagagaaggcttcagagatcatctggatca
gaaagcgagaccgacgacaccgatgacgagaagagaccaaagcgcaggggacgccctcgg
agtgttagaaaagacactgtggaaggatttactgatgctgaaatcaggaggtttatcaag
gcttacaagaagtttggattgcctcttgaacggctggagtgcattgcccgggatgctgag
ctcgtggataagtctgtggctgacctgaagcggttaggggagctcatccacaacagctgt
gtgtcagcaatgcaggaatatgaggagcagctgaaggaaaatccaggggaagggaaagga
cctggaaagagacgaggtcctactatcaagatttctggtgtccaagtcaatgtgaaatcc
atcatccagcacgaagaggaatttgaaatgctgcacaaatccattccctcggacccagag
gaaaggaagaagtaccgcctgacgtgccgtgtcaaagctgctcattttgatgtagactgg
ggagtggaggaggattctcgcttgttagtgggaatttacgagcatggttatggaaactgg
gagctaattaaaacagatccggagttgaagttatctgataagatcctacctgttgagaca
gataagaaacctcagggaaaacagctccagacccgagttgattatctactgaaactgctg
aaaaaagatctggacaagaaagaaaacatgaaagatggggaagagggcaagctaaagaag
aggaaaccacgggtaaagaaagagaacaaggctcccaaagtcaaagatgagcatgggaat
gaactctcctctcctcggcactcagacaaccagtcagaagaaggtgaagtcaaggaggat
ggcttggacaagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaacaag
gaaaaacagacatcctctaagaaagaaaaggaaagcgataaagagaaaaagaagacaaaa
gacaagaaagagaagcctaaaggtggtgaggccaaatctggaagtaaagggaagagatcg
caaggtcctgtccacattactgcagggagtgagccaatccccatcggagaagatgaggat
gatgatctggaccaagaaacattcagcatatgcaaggaaaggatgagaccagtcaaaaaa
gccctgaagcaacttgataagcctgataagggactgacagttcaagaacagctggagcac
acacgcaactgcctcctaaaaatcggtgatcgcatctctgagtgccttaaagcctacact
gaccaggatcacatcaagctgtggagaaggaacctatggatatttgtgtcaaaattcaca
gaatttgatgccagaaaactacacaaactctacaagatggctcataagaaaagatcacag
gaagaggaggagcaaaagaagaaggaggacatgtccagcatgaagaagccgttccgccca
gagccttcaggctccagccgcgattccgtgatgtcccagtctcacgtgcctcacaatcct
cattcccagaagatccacatgcccccttcccacacccagcagcagatgcatgggcaccca
cgggacaactacggccatccaaacaagaggcatttcagcaacacagaccgaggagactgg
cagagggatcgaaagttcaactacggtggcaacagcaaccagatgtggggcggggagcgg
caccaccagtacgagcagcactggtacaaggaccaccactacggggaccggcggtcgcgg
ggggatccccaccggagctccggcaactacagaccaaacaacctctcccgcaagaggccg
tacgagcagtacaacagcgaccgagaccacagaggccaccgagactactacgacaggcac
caccacgattccaaacggcggcggtcggacgacttcaggcctcagaactaccaccagcag
gatttccggcggatgtctgaccacaggccgcccatgggataccatggccaaggaccttcg
gaccactaccggtccttccacacagacaaactgggagattacaaacagcccctccctcca
tctcaccctgcagtgtcggaccctcgctcacccccctctcagaaatccccccacgattcc
aagtcacctcttgatcacaggtcacccctggataggtcattggaacagaaaaacaatcca
gattataactggaacattcggaaagcataa
DBGET
integrated database retrieval system
