Aphelocoma coerulescens (scrub jay): 138116705
Help
Entry
138116705 CDS
T10543
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138116705 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
acoe03310
]
138116705 (RORA)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138116705 (RORA)
Nuclear receptors [BR:
acoe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138116705 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138116705
NCBI-ProteinID:
XP_068882381
LinkDB
All DBs
Position
10:complement(16161828..16642419)
Genome browser
AA seq
588 aa
AA seq
DB search
MRRLPSAGKATPAAAAEWRGNIWTTLSSLITNTSRISNCNQLMGVYRKNGFKENSSSYRK
GISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKDISVTHTVTVLQILGQSSKSH
SCAGYAVNCLSLRKQKRYREMICFKHTTKNLLSAFSRGRGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggctcccgtccgcaggcaaagctactccagcagcagcagcagagtggaggggt
aacatttggacaactctgtcatccttgataacaaatacgagcagaatcagcaactgtaat
cagctcatgggagtttacagaaaaaacggctttaaagaaaacagcagcagctacaggaaa
ggtatttctgtaacaaagaagactcatacatctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattatggtgtcattacatgtgaaggctgcaaggac
atttctgtgacacacacagttacagtgctgcagattttaggacaatcctcaaaatcacac
agttgtgctgggtatgctgtaaattgtctctctctgcgtaagcagaagaggtacagagag
atgatctgcttcaagcacaccaccaagaacctgctcagtgcattcagccgagggaggggc
tttttcagaaggagtcagcagagcaatgccacatactcatgtcctcgacagaagaactgt
ctgatcgaccggaccagtcggaaccgctgccaacactgtcgcttacagaaatgccttgct
gtggggatgtctcgggatgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagc
ctgtacgccgaggtgcagaaacaccgaatgcagcagcagcagcgggatcaccagcagcag
ccaggagaggcagaaccactcacaccaacatacaatatcaccaccaatgggttaacagag
ctacacgatgacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagac
tctgcagttagcagcttctacttagacatacagccttctccagatcagtcgggtcttgat
attaatggaatcaaaccagaaccaatatgtgactacacaccagcatcgggcttcttccct
tattgttcttttacaaatggggagacctctccaactgtgtccatggcagaattagaacat
cttgcacagaatatttccaagtcacacatggaaacttgccagtacttgagagaggagtta
cagcagataacatggcaaacttttctgcaggaagaaattgagaactatcagaacaagcaa
agggaggtaatgtggcagttatgcgcagtcaaaataacagaagctatacagtatgtagtg
gaatttgccaaacgcattgatggctttatggaactgtgtcaaaatgatcaaattgtgctt
ttaaaagcagggtctttagaggttgtgttcatcagaatgtgccgtgcctttgactcccag
aacaacacagtctactttgatggcaagtatgctagcccagaggttttcaagtccttaggt
tgtgaagacttcattagctttgtgtttgaatttggaaaaagtttatgttctatgcacctg
acagaagatgagatcgctttgttttctgcgtttgttttaatgtctgcagatcgctcatgg
cttcaggagaaagtaaaaattgaaaaactccaacagaagatccagctagcacttcagcac
gtcctacagaagaaccaccgagaagatggaattctaacaaagttaatatgcaaagtgtct
actttaagagcactgtgtggacgacatacagaaaagcttatggcatttaaagcaatatac
ccagacattgtgcgacttcattttcctccactttacaaggagttgttcacttcagagttt
gagccagcaatgcaaattgatgggtaa
DBGET
integrated database retrieval system
