Aphelocoma coerulescens (scrub jay): 138116763
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Entry
138116763 CDS
T10543
Symbol
ATXN1L
Name
(RefSeq) ataxin-1-like isoform X1
KO
K23616
ataxin 1/1L
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138116763 (ATXN1L)
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
138116763
NCBI-ProteinID:
XP_068882524
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Position
11:281874..293319
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AA seq
688 aa
AA seq
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MRAGHERSQECLPPKKRELAAANTGTEAGRAGGAQGEGEGPEWARTAGPAPAAPRYGPGE
APEAAAGLTVDQYGMLYKVAAPPATFSPTGLHPVVNVSPLPPAFNVTSPIIQHSGVPFPS
IHYAQIPSASLQLIGSHYTVPYAVPPAFLPSPLLSPSTNLTAPHVPHFVPYASLFTEEAA
PSPQTTSPTHSFNKSTSAASPGQMQHHAAPQSLDMAPGRIPVYYQMSRLPPGYSAYEAPV
AGGSLESPQHHSQLSSEVAAANGGQRPLEQSVASRPSEAVDSASSAAEDCLPPGAAAGCM
SDGQFLPGYQMLGREISVPTHRSTPDADLEVQRVVGVLAAQDYHVLAAQRKDDPSPLNLC
HNIPDGQGDMPRNTTDRAAAGNSQSQSPCGMSPEETVRQRQLTKGMVIANGKPVLVPVGS
EPVRSSTSEALVRESPDAQARGNVLEKELAHLQPPSSSQLPSHFMKGAIIQLATGELKRV
EDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVTLHFVVGEQQSKVSIDVPPEHPF
FVYGQGWSSCSPGRTAQLFALPCHRLQVGDVCISISLQSMNGNSASQANSPLTDQLVSAR
ERLERTAQGPREPSDRAAERKSHTDRANMVQSSHAESSQPEAGSLYSLAPGFQRYSVQAE
EPRPSLLRPSFIPQEVKLSIEGRSNAGK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgggccacgagcggagccaggagtgtctcccgccaaagaagcgggaacttgcc
gccgccaacactggcaccgaggcgggacgggcggggggagcccagggcgagggcgagggc
cccgagtgggcccgcacggccgggccggctcccgccgcaccgcgctacggtcccggcgag
gcccccgaggcggcggcagggctgacggtggaccaatacgggatgctctacaaagtggca
gcaccacctgccaccttctcccccacgggcctgcaccccgtggtgaacgtgagccccctg
ccccccgccttcaacgtgacctcgcccatcatccagcactcgggggtgcccttcccctcc
atccactatgcacagatcccttcggcctccctgcagctcatcggttcccactacacagtg
ccctatgccgtccctcctgccttcctgcctagtcctctcctgtctccctccaccaacctc
accgccccccatgtcccccactttgtgccatatgcctccctgttcacagaagaagctgct
ccttccccccagactacctctcccacccacagcttcaacaagtccacctctgcagcctct
cctgggcagatgcagcaccatgctgcgcctcagtcactggacatggcaccggggagaatt
cctgtttattatcagatgtcccgcctcccaccagggtattcagcctatgaggcacctgta
gcaggtgggagcctagagtctcctcagcaccacagtcagctgagctcagaggtggctgcg
gccaatggtgggcagagacccctggagcaaagcgtggccagtaggcccagcgaggccgtg
gactctgccagcagtgcagctgaggactgtctgcccccaggggctgcagcaggatgtatg
agcgacggacagttccttccaggttaccagatgctgggaagagagatatctgtgcctact
cacaggagcaccccagatgctgatctggaggttcagagggtagtgggggtgttggcggct
caggattatcatgttctggcagcccagaggaaagatgacccaagccctttgaacctttgc
cataatattcctgatgggcagggagacatgccgaggaacaccacagacagggcggcagct
gggaacagccagtcccagagcccatgtggaatgtcccctgaagagactgttagacagaga
cagttaaccaaaggaatggtgatagccaacggcaagccagtccttgttcccgttggatct
gagcctgtcaggtcttccacttcagaagccctggtgagggagagcccagatgcacaggct
cgaggaaatgtgcttgaaaaggagctggcccatttgcagccacccagctcctcacaactg
ccctctcacttcatgaaaggagccatcatccagctggcgacaggagagctcaagcgggtg
gaggacctgcagactcaagactttgttcgcagtgcggaggtgagtggaggcctgaagatc
gactccagcactgtggtggatattcaggaaagccagtggcctgggcttgtcacactgcat
tttgtggttggggagcaacaaagtaaagtgagcattgatgtgcccccagagcatcccttc
tttgtgtacggccagggctggtcctcctgcagcccagggaggactgctcagctctttgct
ttgccctgtcacaggctgcaagtaggggatgtctgcatatcaatcagtttacagagcatg
aatggcaactctgcttctcaggccaactcccctctcacagatcagctggtgtctgcgagg
gagagactggaacgaacagctcaggggcccagagagccatctgacagagctgctgaaagg
aagagccacacagatagagccaacatggtccagagctctcatgcagaatcctctcagcct
gaggctggcagtctgtacagtttggccccaggcttccaaagatacagcgtgcaggcagag
gagcctcggccctctctgctccgtccctctttcattccccaggaggtcaagctgtctatt
gaagggcgttcgaatgcagggaaatga
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