Aphelocoma coerulescens (scrub jay): 138116837
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Entry
138116837 CDS
T10543
Symbol
CDH1
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04371
Apelin signaling pathway
acoe04514
Cell adhesion molecules
acoe04520
Adherens junction
acoe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
138116837 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138116837 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138116837 (CDH1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138116837 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138116837 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138116837 (CDH1)
04090 CD molecules [BR:
acoe04090
]
138116837 (CDH1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
138116837 (CDH1)
Cell adhesion molecules [BR:
acoe04515
]
Cadherins
Major cadherins
138116837 (CDH1)
CD molecules [BR:
acoe04090
]
Proteins
138116837 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
BACON_2
Motif
Other DBs
NCBI-GeneID:
138116837
NCBI-ProteinID:
XP_068882687
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All DBs
Position
11:complement(1110580..1119203)
Genome browser
AA seq
882 aa
AA seq
DB search
MGRRAGCSVPLCLLLFLLQSGQRLCQRAASCQPGFTAENFALTVPRDSVAAGRALGRVSF
VDCGESHRAAFLSDDTRFKVSRDGVISATRPLQLQRGKIAFAVHTWDAVGKKHLAKVILR
RRRHQHRHHERMQQDTVPDMLIFPEHGHGLRRQKRDWVIPPINCPENERGPFPKKLVQIK
SNKDKETKVFYSITGQGADTIPVGVFIIERETGWLEVTKPLDREQKDKYVLYSHAVSANG
QPVEDPMEIIITVTDQNDNRPVFTQQVFVGYIEENAKPGTSVMTVNATDADDGINVNNGI
IGYSILSEEPKGAQQMFTINAEKGIISVIGTGLDRETTPNYTLIIQAADQEGTGLTNTAT
AIIKVTDANDNPPVFNPAMYEESVNENEVGVLVARLHVTDQDLPGSPAWHAVYRIQSGDP
QGDFEITTDPKTNDGLLKTAKGLDYETQNRYKLVVSVENEVPFTVALNPATASVLVLVKD
VNEAPIFIPPVKQVEVMEDVPVGYQVTSYTAQDPDKDQSQKITYRMGSDPAGWLAIDPEN
GIVTAAQPLDREAAHVINSTYKAIVLAVDNGSPHDATGTGTLLLLLQDVNDNGPVPEPRS
FDICNRQPEEQTLNIVDKDLPPNTFPFRAELMHGSGSNWTARVTPPDLVKLSMKKELEPG
EYSIFLKLLDGQGKEQITPVRAQVCSCEGPAKNCERRAFISGGMGVPAILGILGGILALL
ILLLLLLLFARRRKVVKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLDARPE
VIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSE
ATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELYGGGEEDD
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggggcggcgggcgggctgctcggttccgctctgcctcctcttgttcctgctccagagc
gggcagcggctgtgccagcgggcagcgtcgtgccagcccggcttcaccgccgagaacttc
gctctgacggtgccgcgggacagcgtggcggcaggacgggcactgggacgagtgagcttt
gtggactgtggtgagtcgcaccgtgccgccttcctctccgacgacacgcgcttcaaggtg
agcagggatggtgtcatctctgccacccggcccctgcagctccagcgggggaagatcgcc
ttcgctgtgcacacctgggacgctgtgggcaagaagcatttggccaaggtgatcctgcgc
cgccggcggcaccagcaccgacaccacgagcggatgcagcaggacacagtacccgacatg
ctgattttcccggagcatggacacggcctccggcggcagaagagggactgggtcatcccc
cccatcaactgccccgagaatgagcgggggcctttccccaagaagctggtgcagatcaaa
tccaacaaggacaaggagacgaaggttttctacagcatcacggggcagggagcggacacc
atccccgtgggtgtcttcatcatcgagcgggagacagggtggctggaggtgacgaaaccc
ctggaccgggagcagaaggataaatatgtgctctactcccacgccgtgtcagccaacggg
cagcctgtggaggatcccatggagatcatcatcaccgtcactgaccagaacgacaaccgg
cccgtcttcacccagcaagtctttgttggctacattgaggagaatgcaaagccgggcacg
tccgtgatgaccgtgaacgccacggatgcagatgatgggatcaacgtgaacaacggcatc
atcggctactccatcctcagcgaggagcccaagggtgcacagcagatgttcaccatcaat
gctgagaagggcatcatcagtgtcattggcacaggactggaccgggagaccactcccaac
tacacgctgatcatccaggctgcggaccaggagggcactggcctgaccaacactgccacc
gccatcatcaaagtcaccgatgccaacgacaatcctcccgtcttcaaccctgccatgtat
gaggagtcagtgaacgagaacgaggtgggggtgctggtggcccggctgcatgtgacggac
caggacctgccaggctctccggcctggcatgccgtctaccgtatccagagcggggacccg
cagggcgacttcgagatcaccactgaccccaaaaccaacgatgggctcctgaaaactgcc
aagggcctggattatgagacccagaaccggtacaagctcgtggtgtcggtggagaacgag
gtccccttcaccgtggccctgaatcctgccacggccagtgtcctggtgctggtcaaggat
gtgaatgaagcccccatcttcatacccccagtcaagcaggtggaggtgatggaggatgtg
ccagtgggataccaggttacctcttacacggcccaggaccccgacaaggaccagagccag
aaaatcacgtatcgcatgggcagtgatcccgcggggtggttggccattgaccctgagaac
ggcatcgtcacggcggcccaaccactggaccgggaggcagcgcatgtcatcaacagcacc
tacaaggccatcgtcctggccgtggacaatggatcaccacacgatgccaccggcacgggg
acactgctcctcctgctccaggatgtgaacgacaatgggcccgtgccagagccccgcagc
ttcgacatctgcaaccggcagcccgaggagcagacgctgaacatcgtcgacaaggacctg
ccccccaacaccttccccttcagggcagagctgatgcacggctccggcagcaactggact
gccagggtgactccaccagacctggtgaagctgagcatgaagaaggagctggagccgggc
gagtacagcatcttcctgaagctgctggatgggcagggcaaggagcagatcacgccggtg
cgagcccaggtctgcagctgcgaggggccagccaagaactgtgagcggcgagcgttcatc
tctggtggcatgggcgtgcccgccatcctgggcatcctggggggcatcctggcgctgctc
atcctcctgctactgctgctgctctttgcaaggaggaggaaggtggtgaaggagccgctg
ctcccacccgaggatgacatgagggacaatgtctaccactatgacgaggagggcggtggc
gaggaggaccaggactatgacctgagccagctgcaccgggggctggacgcccggcccgag
gtgatccgcaatgacgtggcccccccgctgatggccgcccctcagtaccggccccgcccc
gccaaccccgacgagatcggaaacttcatcgacgagaacctgaaggcggccgacacggac
cccacggcccccccctacgactcgctgctggtgtttgactacgagggcagcggctcggag
gccacctcgctcagctccctcaactcctccgcctccgacggcgaccaggactacgactac
ctcaacgactggggcggccgcttccgcaagctggccgagctctacggcggcggcgaggag
gacgattag
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