Aphelocoma coerulescens (scrub jay): 138116885
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Entry
138116885 CDS
T10543
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138116885 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138116885 (NUP93)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138116885 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
RP854
Motif
Other DBs
NCBI-GeneID:
138116885
NCBI-ProteinID:
XP_068882809
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All DBs
Position
11:complement(8345634..8424528)
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AA seq
819 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLESLSAVTTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRR
TFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENEPSYVGEVGPPGRSSLDS
VEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASD
ALKVRTNMEVRMEFVRHALHYLEESYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKD
RRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQ
VCFDDGGTSSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEAGDPPGVRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDK
FTSDTKSIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNK
ERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLV
PLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMED
RDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacacggaaggctttggagagctgctgcagcaggcagagcagctggcagccgagaca
gaagggatctccgagctcccgcacgtagaacgcaacctgcaggagatccagcaggccggg
gagcggctgcggtcccgcaccctgacccgcacctcccaggagactgcggatgtgaaggca
tcagttcttcttgggtctagagggcttgatatatcccacatttctcagcgactcgagagt
ctaagtgcagtcactacatttgagcctctcgaacctgtgaaggacactgacatccaggga
ttcctgaagaatgaaaaagataatgcattgctgtctgccattgaagagtcgaggaggagg
acttttgccatggctgaggagtatcaccgagaatcaatgctggttgaatgggaacaggtg
aaacaaaggattcttcattctctgcttgcatcaggggaagatgctcttgatttcacccag
gaaaatgagcccagctatgttggtgaggtgggtcctccaggtcgcagctctttggacagt
gtggagatggcatatgctcgtcagatttatatttataatgagaagatagtgaatggacat
ctgcagcctaacctggtggacctttgtgctgctactgcaggcctggatgataagaacatc
tccgagatgtgggccatggtgaaacaaatgaccgacgtcactctggttcctgccagtgat
gccctgaaagtccggaccaacatggaggtgcgcatggagttcgtgaggcacgctctgcac
tacctggaggaaagttacaaaaattacacttttgtgacagtgtttgggaacttgcaccag
gctcagctgggtggagtcccagggacctaccaactggtccgcagcttcttgaacatcaaa
ctcccggcgtctgtccctggtctccaggatggtgaggtggaaggacatcctgtgtgggca
ctgatttactactgcatgcgctgtggagatctgactgcagccatgcacgtggtgaaacgg
gcacagcaccaactgggagagttcaaaacctggttccaagagtacatgcacagtaaagac
agaagactgtctcctgccacagaaaataaactgcgtcttcattacagacgagctctgaga
aataacactgacccctacaaaagggctgtttattgtattattgggcgttgtgacattaca
gacaaccagagcgaagttgctgataaaacagaagattatctttggctaaaactgaaccag
gtgtgttttgatgatggtggcacgagctccccacaggaccgactaacgttatcacagttc
cagaagcagctgctggaagactatggtgaatcacattttgcagtgaaccagccacctttc
ctctacttccaagtgttgttcttgacagcacagtttgaagctgcaattgcttttcttttc
cggacagagcgcttgcgctgtcacgctgttcatgttgctttggtcctgtttgagttaaaa
ttgctcctgaaatcatctgggcagagtgcacagctattaagccatgaagctggtgaccct
cctggtgtcagacgtctaaattttgtgcggcttttgatgctttacacccgtaagtttgag
tcaacagatccaagggaagctctgcagtacttttactttctcaggaacgagaaggacagc
caaggagagaatatgttcttgcgttgcgttagtgaaatagtaattgaaagcagagagttt
gatatgattcttggaaagctggaaaaagatggtagtaggaagcctggagtgatagacaag
tttacaagtgacacaaaatccattattaacaaagtggcttctgcagcagaaaataaagga
ttgtttgaagaagctgcaaaactctatgaccttgcaaagaaccctgacaaagttttagaa
ctgatgaacaagctccttagtccagttgttccccagatcagcactccccagtcaaacaag
gagcggttgaagaacatggcccattccattgctgagaggtacaaagcgcaggggataagt
gcaaagaaatccattgactccacattctaccttctgctagacttaatcacgttttttgat
gaatatcacgctggtcacgttgacagggcctttgatattattgaacgcctgaagctcgta
cctcttagccaagattgtgtcaaggagagagttgctgccttccggaatttcagcgatgaa
atcaaacacaatttatctgaggtcctgcttgcaaccatgaatattttattcaccaaatat
aagaggatgaaaggcacaagcccaaccactcctgccagaccccagcgggtaatggaagac
agagattcgcaacttcagtctcaagctcgtgcactgataatgtttgctgggatgatccca
tacagaacatcgggagacacaaacgcaagactggtgcaaatggagatccttatgaattag
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