Aphelocoma coerulescens (scrub jay): 138116910
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Entry
138116910 CDS
T10543
Symbol
PAAF1
Name
(RefSeq) proteasomal ATPase-associated factor 1
KO
K11887
proteasomal ATPase-associated factor 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
acoe03051
]
138116910 (PAAF1)
Proteasome [BR:
acoe03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
Other PIPs
138116910 (PAAF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
Nucleoporin_N
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
138116910
NCBI-ProteinID:
XP_068882840
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Position
1:119323243..119333452
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AA seq
429 aa
AA seq
DB search
MAWPRRRSLIGEFLPVPVARGSTGSKEAEVGVVTPVKMAATLRIQSDWSRALSRDEGEAW
LSCRSTGKPTLYGSVTRRGLSSDGVPDIVASEGFVVREVTKKSILISCPHENVSTKFLAP
YTSFCRIHQKSITCLDVSSGGGLGVSTSTDGTMKIWQAANGEIRRLLEGHVYDVNCCRFF
PSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKRGILDTAIVDRGRNVLSCSRDGTARLW
DCGKSACLGVIADCGSPINGIAVGTADNSLNLGTPEKPPSEREVGTEGKILLLAREDKKL
QGVGLQSRQPVFLFVGSDAFNCCTFLSSTYILAGTQDGNIYQLDVRNTNAPIQVIHRSGA
PVLSLLPYRDGFIASQGDGTCFIVQQDLDYVLDLTEADCDPVYKVASWEKEIYTCCRDGI
VRRYQLADL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggccgcggcggcgctcgttgattggcgagtttcttcccgttccggtcgcgcga
gggtcgacgggaagtaaggaggcggaagtaggtgtagttaccccggtaaagatggcggcg
acgctgcggatccagagcgactggagccgggcgttgagcagggacgagggcgaggcctgg
ctgagctgccgcagcaccgggaagcccaccctgtacggcagcgtcacccggcgcgggctc
agctccgatggtgtcccagacatcgtggcctccgagggattcgtggtccgggaagtcacc
aagaaaagcatcctcatttcttgtcctcacgaaaatgtgtccacaaagttcctggctcca
tacacaagtttttgtaggattcatcagaaaagcattacctgccttgatgtttccagtggt
ggaggactcggtgtgtctaccagcacggatgggaccatgaaaatctggcaggctgcgaac
ggagaaataagaagacttttggaaggccatgtgtatgatgtgaattgttgcaggtttttc
ccatcgggcctcgtggttctgagtgggggaatggatgcccagctaaagatctggtcagca
gaagatgccagctgtgtagtaacatttaaaggtcacaaaagaggtattttggacactgcc
atcgtggatcggggaagaaatgtcctgtcctgctccagggacggcactgcccgtctctgg
gactgtgggaaatctgcctgcctgggcgtcatcgctgactgcggctctcccatcaacggc
atcgccgtgggcactgctgacaactccctgaacctgggcacacctgagaaacctcccagt
gaacgtgaggtcgggacagaagggaaaatcctgctgctggctcgagaggacaagaagctt
caaggagtgggactgcagagcaggcagccagtgttcctctttgttggatctgacgccttc
aactgctgcacattcctgtcaagcacctacattctggcagggactcaggatgggaacatc
taccagctggatgtgagaaacacaaatgctccaatccaggtgatccataggtcaggagca
ccggtgctttccctgctaccctaccgagatggatttattgccagccaaggggatggcacc
tgcttcattgttcagcaagacctggattatgtcctggatctcaccgaggccgactgcgac
cccgtgtacaaggtggcttcttgggaaaaggaaatttacacgtgctgcagggatgggata
gtgaggagataccaacttgctgacctttaa
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