Aphelocoma coerulescens (scrub jay): 138116959
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Entry
138116959 CDS
T10543
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138116959 (RFWD3)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138116959 (RFWD3)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138116959 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
Beta-prop_WDR5
WDR55
zf-rbx1
zf-RING_5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_THOC3
EIF3I
Rtf2
zf-RING_11
zf-C3HC4_4
Beta-prop_WDR3_2nd
Myo5a
zf-UDP
Nairovirus_Gn
CFAP43_N
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
WD40_Prp19
Casc1_N
WD40_2
DUF7837
zf-Nse
Beta-prop_RSE1_2nd
Beta-prop_EIPR1
zf-ANAPC11
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
138116959
NCBI-ProteinID:
XP_068882921
LinkDB
All DBs
Position
11:complement(8119928..8143117)
Genome browser
AA seq
747 aa
AA seq
DB search
MAQEEMEVDLQPVAGYSVETLRTLAPEPSGHAVLSSHVPVLGEGGGSTAALPADDAVATP
NAGTTREAAAEPDPPPNPAVAPSELQRLQGVFDLYQPLPVPQLTQRPQVRRARRQQRIGD
SQRTSSARAALDHYFQLSRTQEPAAGPVPHLEPPRIARDTQEQRPDEIVEVSDSDSSTSE
EEEEAVEAAAPLLPSAQETPPAASSGVSSQVQAEPPQASAEHESLEDEAEVQQKQTTPQK
KLGPSVPVAALDEEEGDTCAICFEQWTNAGDHRLSALRCGHLFGYTCIERWLKGQAGKCP
QCNKKAKRSDIVILYARTLKALDTSEQERMRSSLEKEQMLRRQAELESAQSRLQLQVLTD
ECSKLRKQVQELKALVSQYNVSASQQPGSSRTCLPGSLPSSQSQRKYHLEKVFLVSQTGN
CRVMAYCDSLSCLVVSQPSPQSTFIPGCGVKMMSLANLKSSQYIPIHSKQIRGLAFGTRA
DGLLLSAALDSTLKLTSLATNTVVQTYNAGRPVWSCCWCLDDTNYVYAGLVNGSIMIYDL
RDTNSHVQELVPQKSRCPMVSLSYLPRMASASLPYGGILAGTLEGACFWEQKAGNSYRPH
HLPLEPGGCIDLQTEINTRHCLATYRPGKNNPCVRCVMMELTCSPLTEASEDVVCSSNPV
QTFSAGPTCKLLTKNAIFQSPEDDGSVFVCAGDEASNSAMLWDAGSGSLLQKLPADLPVL
DICPLEVNQTHLLATLTEKMVNIYKWQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaagagatggaagttgatctccagccagtggctggttactcggtggagacc
ctccggacacttgctccagagccctctggtcacgcagtgctctcgtcccacgttcccgtg
ctgggtgaaggaggaggcagcactgcagcccttcctgctgatgatgctgttgccacaccc
aatgctggtacaacaagggaagcagcagcagagcctgacccaccgccgaatcctgctgtg
gcccccagtgagctgcagaggctgcaaggggtgtttgatctctaccaaccactgcctgtg
ccacagctcacacagcgtccgcaagtgaggagagctcgcaggcagcagagaattggtgat
tcccagaggacaagcagtgccagggcagcactggaccattactttcaactcagcaggacc
caagagccagctgcaggaccagttccacacctggagcccccccgtattgcgagggacacc
caggaacagcgcccagacgagatagtagaagtgagtgactctgacagcagcacttcggag
gaggaggaggaagcagtggaggcagcagcaccactgttaccatcagcccaggagacacct
ccagcagcaagctcaggagtttccagtcaggtccaagcagagccacctcaagcttctgca
gagcatgaaagtcttgaagatgaagctgaagtccagcaaaagcaaacaactccacaaaag
aaactggggccatcagttcctgttgcagctctggatgaggaggaaggagatacctgtgca
atctgctttgagcagtggaccaatgctggggaccaccgtctgtcagcgctgcggtgtggg
cacctctttggctacacatgcattgagaggtggctcaagggacaggcagggaagtgccct
cagtgcaataagaaggccaagcgttctgacatcgtgatcctgtacgcccgcacattgaaa
gctctggataccagtgagcaggagcgcatgaggagctctttagaaaaggagcaaatgttg
cggagacaggcagagctggaatctgcacagagccgtctccagctccaggttctgacagat
gaatgcagcaaactccgcaagcaagttcaggagctgaaggctctggtgtcccagtacaac
gtgagcgcttcgcagcaacctggcagctcccgcacctgcctcccaggcagcctcccctcc
agccaaagccagcgcaagtaccacttggaaaaggtttttttggtgtctcagactgggaac
tgcagagtaatggcatactgtgactcactgagttgtcttgtggtatcccagccttctcca
caatctacttttattcctggttgtggtgttaagatgatgagcttggccaacctgaagagc
agtcagtacatccccatccacagtaaacagattcggggcctggctttcggcactcgagca
gatggtttgctgctctctgctgccctggacagcactcttaaactcaccagcttggcaaca
aacactgtggtacagacatacaatgctggtcgtcctgtgtggagctgctgctggtgtctc
gatgatacaaactatgtctatgctggattggtcaatggctctatcatgatatatgatctg
agagacacaaactctcatgtccaagaactggtccctcagaagtccaggtgccccatggta
tcgctgtcctacctgccccggatggcctcagcgtcactgccttatggcggaatattggct
gggaccttggaaggagcctgcttttgggaacagaaagctggcaactcttaccggcctcat
cacctgcccctggaacccggaggctgcattgatctccaaacagagatcaacacacggcac
tgcctggccacgtacaggcctggtaaaaataacccatgtgtgcgttgtgtgatgatggaa
ctgacctgcagcccactgacagaggcctctgaagatgtggtgtgttcttctaacccggtt
cagactttcagtgctgggcccacttgcaagttgctgaccaaaaatgccatttttcagagc
ccggaggatgatgggagtgtctttgtgtgtgctggtgatgaggcatccaattctgctatg
ctctgggatgctggaagtggttccttgctgcagaagctgccagctgacctgcctgtgctg
gatatctgccccttggaagtgaaccaaactcacctcttggctactctgacagagaagatg
gtgaatatctacaagtggcagtga
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