Aphelocoma coerulescens (scrub jay): 138116962
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Entry
138116962 CDS
T10543
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138116962 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138116962 (VPS35)
Membrane trafficking [BR:
acoe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
138116962 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
138116962
NCBI-ProteinID:
XP_068882934
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All DBs
Position
11:14163192..14188415
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPTEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctcctcaggatgaacaggaaaaactcctggatgaagccatt
caggctgtgaaggtgcagtcgttccagatgaagagatgcttggacaagaacaagctcatg
gatgctctgaaacatgcttccaacatgcttggggagctgcggacttctatgttatctcca
aagagctattatgagctctacatggcaatttctgatgagctgcactacttggaagtctac
ctgacagatgaatttgccaaaggcaggaaagtggcagacctttatgagctagtacagtac
gctggaaatatcattccaagactgtatctgctgataacagtaggtgttgtctatgtcaag
tcgtttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtggagtg
cagcatcctcttagaggcctctttcttagaaactatctcctgcagtgtaccaggaatatc
ttaccagatgaaggcgagcaagcagacgaagaaaccactggagacatcagtgactcgatg
gattttgtgctgctgaactttgctgagatgaacaaactgtgggtgcgaatgcagcaccag
ggccacagtcgggacagagagaaaagggagcgtgagaggcaggagctgaggatcctcgtg
ggaacaaacctggttcgcctcagtcagctggaaggggttaatgtggagcgatacaagcag
attgttctgcctggaatactggagcaagttgtgaactgtagagatgctttagctcaggag
tacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaaccctgaac
ccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataattatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggacctggtatcccagca
gatatcaaactgtttgacatcttttcacagcaggttgctactgttatacagtctcggcag
gatatgccctcagaggatgtggtgtctttacaagtttctctcattaacctggctatgaaa
tgctacccagatcgagtggactatgttgacaaggtgttggagactactgtggaaatattc
aacaaacttaatctggaacatattgcaacaagcagtgctgtttcaaaggagctgactaga
cttctgaaaatccctgttgatacttacaacaacatcctgacagttctgaaactaaaacat
tttcacccgctctttgaatactttgattatgagtccaggaagagcatgagttgttatgtg
cttagcaacgtattggattataacacagaaattgtgtcccaagaacaggttgatgccatc
atgaatttggtatccaccctgatccaggatcaaccagatcagcctactgaagatcctgac
cctgaggactttgctgatgagcagagtcttgtgggaagatttattcatctcctgcgttct
gatgaccctgaccaacagtacctgatcctcaacactgcccggaagcactttggggcaggg
gggaaccagcgcattcgtttcacactgccacccttggtttttgctgcctaccagctcgct
tttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgccagaagatc
ttctcatttgctcatcagaccatcagtgctctgatcaaagcagaactggcagagctgcct
ctccgacttttcctgcagggagcactggctgcgggagagattggctttgagaatcatgaa
actgtggcctatgagttcatgtcccaggccttctctctgtatgaagatgaaatcagtgac
tcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatgaagtgc
ttcagtgaggagaaccacgagcctttgaggactcagtgtgcactggcagcctccaaactc
ctgaagaagccagaccagtgcagagctgtgagcacttgtgcccatctcttctggtctggc
cgaaacactgacaagaatggagaggagcttcatggaggaaaaagagtgatggaatgccta
aagaaggctctgaagatagcaaatcagtgcatggacccttctctgcaagtccagcttttc
atagaaattctgaatagatacatctatttttatgaaaaagagaatgaggcggtgacaatt
caggttttgaatcagcttatacagaagatcagagaagatctcccaaaccttgagtctact
gaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgtctgagg
agggaatcaccggaatctgaggggccaatttatgaaggtcttgttctttag
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