Aphelocoma coerulescens (scrub jay): 138117065
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Entry
138117065 CDS
T10543
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Enzymes [BR:
acoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
138117065 (TDRD12)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138117065 (TDRD12)
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GFIT
Other DBs
NCBI-GeneID:
138117065
NCBI-ProteinID:
XP_068883144
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Position
11:16373623..16398360
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AA seq
1228 aa
AA seq
DB search
MEEINMDVVVLKVEDPGCFWLAVKECVPGVVSEIVYEILNDEMQQFYDNYKDAGEIKREE
IEKGQVYVVFSEELQRWCRALVESVQHQADGCQLGCFLVDYARYCFVASENMRVLVRAFA
EIPHRAKKCRLYCTKPLTLHIDYCEDTAKIGPAKRWDTAAIQHFRKLLEEATEVKATVQA
VEEKVLEVFLFVTVRDDKICVNDDLVAKHFAYYKEAEGSSSDDSDNEVSLNAKYVPVEFI
GPTFVARPKLPFGEMSPPVEPGLAGWNSALEKICQRSSTVINGNTVPVANMVPGLPSKED
KAVQTDRLPQFLNSNSLQTHTVEDDQQSPQNVGEEKNFVFLSKKIEPSSVLETAPLFDGL
KKELYWNKFSGPTFTESYCWPPAAQGYDVIVISHQGKDPLLYIPPVLTLLQLESDYQALP
NMGGPLALILCPGWKKAQLVFDLLKTYGKSCRYLHPMLIILGQNKEAASQVEIRDCRVVV
TTPHNLLRLLEHNTWLLCRLCHLLLDEIEVLLSDTAEKVFTILDCYKKATAQARGNPSRQ
IIAVGTQWNKHIIPLIKEFMNDPYIVITVIEEAAIFGNVHQVVQPCTSSSRTAELLKILD
FTQRNLHKVLVCTDSVTEVEMIHKALKSNSIVSLKKHKESKCNAKCVLERWRKMHSSGTP
AVLVLADDCLQPLGITDATCVIHFSFPSPAVFRQRLQCMTDNFCTVIKDSAVDQEHPKAE
SVILLTENSSCHAPGILHCLKRAEAEIPEELHDSAARVRESEENEKFSRPLCASLKTFGI
CRNRTACPYRHQINLSTDMAQNTADEMIETPDRVTILPLHIVHATNYFGRIVKKQKDQYT
VLAKEMNDYFKVPEHRISVNVVEKSVFYGLCEGAICHRVQVVETPAKDEENVCEVTIKYI
DEGRTSEVKSDQLLHLPAKFQSLPAQAVEIIVCRVKPIDNEVEWNPKVTDHINHKIKGKL
HHAKVVHTLGKTVWVDPMVRVTNLPVLKMWINEYSIRSEILSTGLGTDNPEHIAEIKKLC
RQMPVLDHAENLEHLSTKEDTAGLEVSSPQDTLIEENPAESCNTSATPPSDDAVQAKEAG
DSTVHQQKGCHPQIKWFQDNGTVTLRLQILKAADSKCEFSKEEVVFSAYSEGRLYAADLE
LYQSIIAEKSTCVIKDREAVILLVKEKKGEWCKLLKNKNVHVSLDFEHWEESEDERPFTV
DSAKLSYPPAGYEDWIESSEDSDTESDD
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggaggagataaacatggacgtcgtggtattaaaggttgaagatccaggttgcttttgg
cttgctgtgaaagaatgcgtgccaggcgtagtcagtgaaatagtatatgaaatcctgaat
gatgaaatgcaacagttctatgataattataaagatgcaggtgaaataaaacgagaggag
atagaaaaaggccaggtttatgtggttttcagtgaggaactgcagcgctggtgtagggca
cttgtggagtcagtccagcaccaggcagatggttgccagctcggatgttttcttgtggat
tatgccagatactgttttgttgcatcagagaacatgcgagttttggtgcgagcatttgcc
gagatcccacacagagcaaagaagtgtcgcctgtactgcacaaagccactgacattgcat
attgactactgtgaagacactgccaaaataggaccagccaaaagatgggatactgctgct
atccagcattttcgaaaacttcttgaagaggctactgaggttaaagccacagtacaggca
gtagaagagaaagtgttagaggtgtttctttttgtgactgtaagagatgacaagatctgt
gttaatgatgatctggttgcaaagcactttgcttattataaggaagctgaagggagttct
tcagatgattctgacaatgaagtgtctctcaatgctaagtatgttccagtggagtttatt
ggtcctacatttgttgccaggccaaaactgccctttggggagatgtcaccacctgttgag
ccaggtcttgctggttggaattctgctcttgaaaagatatgccaaaggtcaagcacagtt
ataaatggcaacactgtgcctgtagccaacatggtgccaggtttgccttccaaggaagat
aaagcagttcaaacagacaggcttccacagttcttaaattccaactccctccagacacac
acagttgaagatgaccaacagagtcctcaaaatgttggggaggaaaaaaactttgtgttc
ctgagcaagaaaattgagccatcatcagttttggaaacagcaccactttttgatggtctg
aaaaaggaactttattggaacaagttttcaggccctaccttcacagagtcctactgttgg
ccaccagcagctcagggatatgatgtcattgtcatctcccatcagggaaaggatccctta
ttgtatattccaccagttctcacacttctgcagttggaaagtgactaccaagccttgcca
aacatgggtggaccactagcactcattttatgtcctggatggaagaaggcacaacttgtt
ttcgacctactgaaaacatacggaaaaagctgcagataccttcatccaatgttgataatc
cttgggcagaacaaggaagcagccagccaagtggaaatccgagactgcagagtagtagtg
actacaccgcacaacctcctgaggctgctggaacataacacttggttgttgtgtaggctt
tgccatcttcttctggatgagatcgaggtgctgctgtctgacactgccgaaaaggtgttt
actatactggattgttacaagaaagccactgctcaggcacgggggaatccatcacgacag
atcattgctgtgggaactcagtggaataaacacatcatacccttgataaaggagttcatg
aatgatccttacattgtgataacagttattgaagaagctgccatctttggaaatgtgcac
caggtggtgcagccttgcacgagcagcagtagaactgccgagttactgaaaatactggat
tttacccagaggaatcttcacaaggtgctggtctgcactgactcagtaactgaagtagag
atgattcataaggcactgaagagcaactcaatagtttccttgaaaaaacataaggagagc
aagtgtaatgccaagtgtgtcttggagaggtggagaaaaatgcacagttctggcactcct
gctgtgttagttttagcagatgactgcctgcagcctttgggaatcactgatgcaacctgt
gtgatccatttcagtttcccatctccagcagtcttcaggcagcgcctacaatgcatgaca
gacaacttctgcactgtgataaaggattctgctgtagatcaagaacatccaaaggccgag
tcagtcatcctgctgacagagaacagttcctgtcatgcacctggaatcctccactgttta
aagcgtgcagaagctgaaattccagaagaacttcatgattcagctgccagggtgcgagaa
tctgaggaaaatgagaaattttcaaggcccctgtgtgcttctcttaaaacttttgggatt
tgcagaaacagaacagcctgtccatatcgtcaccaaattaatttgtcaacagacatggcc
cagaatactgcagatgagatgatagaaacacctgaccgtgtgactatcctgcctctccac
attgtacatgcaacaaactactttggtcgaatagtcaagaaacaaaaggaccaatacaca
gttcttgctaaagaaatgaatgattacttcaaggtaccagaacacaggatttctgttaac
gtcgtggagaagtcagtgttttatgggttatgtgagggagccatttgccacagggttcag
gtggtagagactccagcaaaagatgaagaaaatgtctgtgaggtcacaattaaatatata
gatgaaggcaggacaagtgaagtgaagagtgatcagctgcttcacttacctgcaaagttt
cagagtctgccagctcaggctgtggaaattatagtttgtagagtaaaacccatagataat
gaagttgaatggaatccaaaggtgacggatcacattaaccacaaaattaaaggaaagctt
catcacgccaaagtggtccataccttgggaaagacagtttgggttgacccaatggtcagg
gttaccaaccttcccgtgttgaagatgtggatcaatgagtacagtattcgatctgagatt
ttgtcgacgggtttggggactgataatcccgaacatatagcagaaattaagaagctgtgc
agacagatgccagttttggatcatgcagagaacttggagcatttaagcacaaaagaggac
acagctggtctagaggtgtccagtccacaggatacactgatagaggaaaatcctgctgaa
agctgtaacacttctgcaactcctccaagcgatgatgcagttcaagcaaaagaagcagga
gactctactgtgcatcagcagaaaggttgtcatccacaaatcaagtggtttcaagataat
gggactgtgacactgaggttacaaatactgaaggcagctgacagtaaatgcgagttttct
aaagaggaggtggttttcagtgcttattcagaaggcagactttatgcggctgacctggag
ctgtatcagtcaataattgctgagaagtccacatgtgtgattaaggatagagaggctgtg
attttactggtaaaagagaaaaaaggagaatggtgcaaattactgaagaacaagaatgtt
cacgtgtccttagattttgaacactgggaagagtctgaagatgaaaggccttttacagtt
gattctgcaaaactgagttatcctcctgcaggatatgaggactggattgagtcctcagaa
gacagcgatacagaaagtgatgactaa
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