Aphelocoma coerulescens (scrub jay): 138117079
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Entry
138117079 CDS
T10543
Symbol
SALL1
Name
(RefSeq) sal-like protein 1
KO
K19871
sal-like protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138117079 (SALL1)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138117079 (SALL1)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138117079 (SALL1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
138117079 (SALL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2HC_2
zf-C2H2_15
IZUMO
zf-H2C2_5
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
138117079
NCBI-ProteinID:
XP_068883170
LinkDB
All DBs
Position
11:12178572..12384741
Genome browser
AA seq
1389 aa
AA seq
DB search
MSRRKQAKPQHFQSDPDLALLSQRNGGFRRSSAQPRGRRRGRACARTCAGTRGDKWSARG
SVLPAPASAGSGPPAAMRRARAGGPRGHSPAAGADGAAAQKRFWRAGDTEKGQANRTTKN
KDAHVCGRCCAEFFELSDLLQHKKNCTKNQLVLIVNENPASPSETFPPSSPSDNPDEQMN
DTVNNTDQVDCSDLSEHNKLDREESMDVEASSINNSSSSSKSVNNSITSSNSSTMGTSAV
TTSLPHIGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCNGASSTKLAVPALMEQ
LLALQQQQIHQLQLIEQIRHQILLLATQNTDMPTSSSPSQGTLRTSANPLSTLSSHLSQQ
LAAAAGLAQSLASQSASISGVKQLPPIQLPQSNPGNTLIPSNSGSSPNINILAAAVTTPS
SEKVASTIGGSQLNNPPVSASSSPAFAISSLLSSASNPLLPQPTPSNSVFSSPLSNIGTP
AEDLNSLTALAQQRKSKPPNVTAFEAKSNSDEAFFKHKCRFCAKVFGSDSALQIHLRSHT
GERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSI
PPEKPVTSWLDSKPVLSTLTTSVGLPLPPTIPSLAPFIKTEEPQPIPISHPSASPPCSVK
SDSGTADPTSKISNGLSDEVEAGVLPTSNGKTEENPQNTSTITNMSSSVSSPAADSGSSS
VATFTNPLMPLMSEQFKAKFPFGGLLDSTPASETSKLQQLVENIDKKATDPNECIICHRV
LSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKK
FTNAVVLQQHIRMHMGGQIPNTPVTENYPESMESDTGSFDDKNFDDIDNFSDENMEDCPD
SSVPDTPKSVDASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSVE
GDVLTNDSSSVGGDMESQSAGSPAVSESTSSMQALSPSNSTNDYHKSPSIEEKPLRALPS
EFANGLSPTPANSGALDLTSSNTDKMIKEESLSMLFPFRDRGKFKNTACDICGKTFACQS
ALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPNSSIGPNQNSS
AMPANTLSSLIKTEVNGFVHGSPQDSKEAPSGLVASGPLSSATSPVLLPALPRRTPKQHY
CNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGR
RLSVDGPMTFLGGNPVKFPEMFQKDLAARSGNGDPSSFWNQYAAALSNGLAMKTNEISVI
QNGGIPPAPGGLGNGGSSPISGLTGSLEKLQNSEPNAPLAGLEKMASNENGTNFRFTRFV
EDNKEIVTN
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggaagcaggcgaagcctcagcatttccaatccgatcccgatctggccttg
ttatcccagcgaaatgggggatttcgtaggagttcggcacagccccgcgggcggcggagg
ggacgtgcctgtgcccgtacctgtgctgggacgcggggcgacaagtggtccgctcgaggc
agcgtcctccctgcccctgccagcgcaggctccggccccccggcggccatgcggagggcg
agggccggggggccgcgggggcactcgccggccgcgggcgcggatggcgccgcggcgcag
aagcgcttctggcgggcaggagacacagaaaagggtcaagcaaatcgaaccactaagaac
aaggacgcccatgtctgtggcaggtgctgtgctgagttctttgaattatcagatctcctg
caacacaagaagaattgtactaaaaatcaattagttttaattgtgaatgaaaatccagct
tctccttctgaaaccttccctcctagttccccttctgataatcctgatgaacagatgaat
gacacagttaataacacagatcaagtagactgcagtgacctttcagagcataacaaactt
gacagggaagaatccatggatgtggaggcttccagcattaacaatagcagtagcagttcc
aagagtgtcaacaatagtattacaagcagtaacagctccacaatgggtacctcagctgta
acaacctctctacctcacataggggatctgacaacactaggcaacttttcagtgataaat
agtaatgtaataattgaaaacctgcagagtacaaaagtggcagtagcacagttctcacag
gaggcgagatgtaatggggcatcaagcactaaacttgctgtccctgccctgatggagcaa
ctgttggcattgcagcagcagcagatccatcagttgcaactgattgaacaaattcgtcac
caaatattattattggctacccaaaatacagacatgccaacatcttctagcccttctcaa
ggtactttacgaacatctgccaaccccttgtccacattaagttcccatttatcccagcag
ctggctgcagcagctggattagcacaaagccttgctagtcaatctgccagcatcagtggt
gtgaaacagctaccccctatacagctacctcagagcaaccctggcaacactctaattcca
tccaatagtggctcttctccaaatattaacatattggcagcagcagttacaacaccgtcc
tcagaaaaagtggcttcaactattggtggctcacagctcaacaacccaccagtatcagca
tcatcttcaccagcttttgcaataagcagtttattaagttctgcatctaatccacttcta
cctcagcccacccctagtaactctgttttctccagtcccttgtccaatattggaacacct
gcagaggatttaaactccttgactgccttggcacagcaaagaaaaagcaagccaccaaat
gtaactgcatttgaagcaaaaagtaattcagatgaggcattctttaagcataaatgcagg
ttctgtgctaaagtgtttgggagtgacagtgccttgcagattcatttgcgttctcacact
ggcgagaggccatttaaatgcaacatatgtggaaacaggttctccacaaagggaaactta
aaagtccacttccagcgtcacaaagaaaaataccctcatattcaaatgaatccgtaccca
gtgccagagcatttggacaatattcctacaagcacgggtattccttatgggatgtctata
ccaccagagaaacctgtcacgagctggctggacagcaagccagtcctctccactttgaca
acttctgttggcctgccactcccaccaacgattccaagcttggccccattcatcaaaact
gaggagccgcagccgattcccattagccatccttctgctagccctccctgctctgtcaag
agtgactcgggaacagctgatcccacatcaaaaatttcgaatggactttctgatgaggta
gaggctggtgtgttgcctacctcgaatggcaaaacagaagaaaaccctcaaaacacaagc
accatcactaacatgagcagctctgtgagctccccggcagcagactcgggctccagcagt
gtcgccacttttacaaatccactgatgcctcttatgtcagagcaatttaaggcaaagttt
ccatttggaggactattggattcaacgccagcatctgaaacgtcaaaattgcagcaactt
gtagaaaacattgacaaaaaggcaactgatcctaacgagtgcatcatttgccaccgagtt
ctcagctgccagagcgcactgaaaatgcattatcgcacccatactggagaaaggccattc
aaatgtaaaatctgtggtcgtgctttcactactaagggcaacttaaagactcactacagt
gtccaccgtgccatgcccccgctgagagtgcaacactcttgcccgatctgccagaaaaaa
ttcaccaatgccgttgtgctacagcagcatatccgaatgcacatgggagggcagatcccc
aacaccccggtgacagaaaactatcctgagtcaatggaatcagatacgggatcttttgat
gataagaattttgatgatatagacaacttctcagatgagaatatggaagactgtcctgac
agcagcgtgccagatacacctaaatcagtggatgcatcacaagacagcttgtcttcttcc
cctctgcccctggaaatgtcaagtattgctgctttggaaaatcagatgaagatgatcaat
gctggccttgctgagcaacttcaggcaagcctgaagtcagttgaaaatgggtcagtggaa
ggggatgttttgactaacgattcgtcatctgtcggtggtgatatggaaagccaaagtgct
ggaagccctgctgtctcagagtctacctcttccatgcaggccttgtccccatccaacagc
actaatgattaccacaagtcaccaagtattgaagagaaaccattaagagctttaccaagt
gagtttgccaacggtttgtctccaacccctgctaacagtggtgctttggacttgacatct
agtaacactgataaaatgattaaagaagagtccctgagtatgctctttcctttcagagat
agaggtaaatttaaaaacaccgcatgtgacatttgtggcaaaacatttgcttgtcagagt
gccttggacattcattacagaagtcataccaaagagagaccatttatttgcacagtttgc
aatcgtggcttttccacaaagggtaatttgaagcagcatatgttgacacatcaaatgcga
gatctaccatcacagctttttgagcccaactccagtatcggccccaatcagaactcttcg
gctatgcctgctaatacactgtcatcgctcataaagactgaggttaacgggtttgtgcac
ggctctcctcaggacagcaaggaagcaccctccggtctagtagcttcggggccactgtcc
tctgccacgtctcctgtgctgctccctgctctccccagaagaactccaaaacagcactac
tgcaacacgtgtgggaaaacattttcttcttccagtgctctgcagatccatgaaaggaca
cacactggtgagaaaccttttgcctgcactatatgtggaagagcattcacaacaaaaggc
aatctgaaggttcacatgggcactcacatgtggaacagtactcctgcaagacgaggcaga
cgactttctgtagatggccccatgacatttctaggaggcaatcctgtaaagttcccagaa
atgtttcagaaggatttggctgcgcggtcagggaatggagacccgtccagcttctggaac
cagtatgcagctgcactctccaacggcttagccatgaagaccaacgagatctctgtcatc
cagaatgggggcatccctccagcaccggggggcctgggcaacggtggcagctctcccatc
agtggcttgacaggaagcctggagaagctccagaattcagaacccaacgcacctctagct
ggtctggagaaaatggcaagcaatgaaaacgggactaacttccgttttacccgtttcgtg
gaagacaacaaagaaattgtaacaaattag
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