Aphelocoma coerulescens (scrub jay): 138117080
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Entry
138117080 CDS
T10543
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04217
Necroptosis
acoe04622
RIG-I-like receptor signaling pathway
acoe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
138117080 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
138117080 (CYLD)
04625 C-type lectin receptor signaling pathway
138117080 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acoe01002
]
138117080 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138117080 (CYLD)
Enzymes [BR:
acoe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
138117080 (CYLD)
Peptidases and inhibitors [BR:
acoe01002
]
Cysteine peptidases
Family C67
138117080 (CYLD)
Ubiquitin system [BR:
acoe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
138117080 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
138117080
NCBI-ProteinID:
XP_068883172
LinkDB
All DBs
Position
11:complement(12390222..12417331)
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AA seq
953 aa
AA seq
DB search
MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVAHSR
NIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
AKGVQIDIGSPVRVQLRSGDEKYPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTSRSGDKSSFNHSKPKAIGSTSEPGNRSRSEVFYTLNGSSV
DSQPQTKTKPPWYIDEAAEDPSKSLTDSSSGFGHSSPPLQPPVTNSVSTENRFHSLPFSL
TKTTSTNGTMGHSPLSLSVQSVMGDVNTTATQESPSTAGPVGNSHGLEAGSLAEVKENPP
FYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPDS
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCYL
DSTLFCLFSFSSVLDTVLLRPKEMNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR
KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKNE
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLED
TPRQCRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPKD
LPDWDWRHGCIPSQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFNI
PQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaggcttatggagtcaagaaaaagcaagttcgtcctattgggaagagcggatc
ttttacttgcttctccaggaatgcagtgtcatagacaagcagactcaaaagctcttgaaa
gtgcccaaaggtagcattgggcagttttttcaagaccgttcttctgtggcacactccaga
aatattccatgtaaaggcaagaaactgcagattggattaaagattctggaacaacctcat
gcaatcttgtttgtggatgagaaggatgttatagaaataaatgaaaaactagcagagttg
cttctggctattactaactgtgaggaaagatacagtttgtttaaaagcaaaagcaggtta
gctaaaggcgtccagatagatattggctcacctgttagagtacagctgagatcaggggat
gagaaatatcctggagttgttcgcttcagagggcccttaatgcaagaaaggtccctaaca
gggatatactttggagtagaattgctggaagaaggtcgcggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttg
gacaaactggagctggtggaagatgatgacaatgaactggaaagtgactatgcagctcca
gttgacgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatccgattggaaactgggatggaaga
tataatggaatacagctgtgcagttttgcaagtgttgaaagtacacttcttttgcatatc
aatgatgttattccagagactgtgtcacaggacaggagacctcccaagcttgcctatacc
tcaagaagtggtgacaaaagctcgttcaatcatagtaagccaaaggctataggatctacc
tctgaacctggaaatagaagcagatctgaagtcttctatacattaaatggctcatccgtt
gactctcagcctcaaacaaaaacaaaacccccatggtatattgatgaagctgctgaagac
ccttcaaaatcacttactgattcatcttctggatttgggcattcttcaccaccactgcag
ccacctgtaacaaactctgtgtctacagaaaacagatttcactccctcccctttagcttg
acaaaaacaacaagtactaatggtactatgggacatagtcctctctctttatctgttcag
tcagtcatgggtgatgtgaatactacagctacccaggagagtccatcaacagcaggacca
gttggaaactcacatggtcttgaagcaggttccttggcagaagttaaagaaaatcctcct
ttctacggagtaatccgctggattggccagccccctggagtaaatgaagtattagcagga
ctggaactggaagatgaatgtgcaggctgtacggatggaacgtttaaaggaactcgatac
tttacttgtgctccaaagaaagctctttttgttaaactcaaaagctgcaggccagattcc
aggtttgcctcactccagcctgtttccaaccagatcgagcgctgcaactctctagccttt
ggaggttacttaagtgaagttgtagaagaaaacactcctccaaaaatggaaaaagaaggt
ttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttactta
gactccaccttattctgcctgttttcttttagctctgttttggacactgtgctactcaga
cctaaagaaatgaatgatgtagagtattatagtgagactcaggagctgctgcggacagag
attgtgaatcctctgagaatatatggatatgtatgtgcgacaaaaataatgaaactgagg
aaaatacttgaaaaagttgaggctgcatcaggattcacttcagaggaaaaagatccagaa
gaatttttgaatattttattccaccatatcctaagagttgagccactattgaaaataaga
tcagcaggtcagaaagtacaagactgttacttctatcaaatttttatggacaaaaatgag
aaagttggagtgccaacaattcagcagttattggagtggtcattcatcaacagcaatttg
aagtttgcagaggcaccctcttgcctgattatccagatgccccggtttgggaaagacttc
aaaatgttcaataaaatttttccatccttggaattaaatataacagacttacttgaagac
actccccggcagtgccgcatctgcggagggctcgctatgtacgagtgcagggagtgttat
gaagacaccgatatttctgctggcaaaatcaagcagttctgcaaaacgtgcaatacacaa
gttcatcttcatcccaagagacagagtcataaattcaatccgttgtcacttcctaaggat
ctgccagactgggactggcggcacggctgcatcccctcgcagaagatggagctgtttgca
gttctgtgcatcgagaccagccactatgtagcctttgtgaagtacggcagggacgactct
gcctggctcttcttcgacagcatggcagatcgggatggaggtcagaatggctttaacatt
ccacaagtcaccccgtgtccagaagttggtgaatacctgaagatgtctctagaagaattg
cactcactggattccagaaaaatccaaggttgtgcacgaagactgctttgtgatgcttac
atgtgcatgtatcaaagtccaacgatgagtttatacaaatga
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