Aphelocoma coerulescens (scrub jay): 138117099
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Entry
138117099 CDS
T10543
Symbol
NLRC5
Name
(RefSeq) protein NLRC5
KO
K22615
NLR family CARD domain containing 5
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
acoe04054
]
138117099 (NLRC5)
Pattern recognition receptors [BR:
acoe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138117099 (NLRC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
Atypical_Card
LRR_4
NLRC4_HD2
NPHP3_N
AAA
AAA_16
AAA_30
AAA_22
nSTAND3
AAA_19
NOD2_WH
RNA_helicase
ATPase_2
Helicase_IV_N
Motif
Other DBs
NCBI-GeneID:
138117099
NCBI-ProteinID:
XP_068883215
LinkDB
All DBs
Position
11:6734944..6771888
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AA seq
1859 aa
AA seq
DB search
MQPPFQDDDLDLRAAVARARPQLVEFLSHCPDWLLMTSQHFVPEVALSSLGGITDHKEKA
SVLLDLLEEAGPAAWKHFAQSVCMEYDLPLDLEILLMSSAGEGNFSQTEEASTDTRAQSS
VPKGSARRRHCSSSGGDKDAKQQRLDSSAKYRHLLVDSIRQRYGSRREAGAEAQEQTQPP
FNQAFVNVVIRQRKVSRLKERTEKPREDVAGAPEPEECADTAMKVSDLFCSEAPSGTTKV
VVLFGKPGTGKTRLMHRICQKWAEGVLPHFLFTFLFEFRQLNLLKRKLTLKELLFDMFLQ
PEDSPDAVFQDLLENAQQTLIIFDGLDEFAANMDVSLSSKRGPAVTSPMSIAQLFADLCH
GKLLPGCTVLVTSRPKRLPDFLLYAVGVLAEIWGFDHKKVEEYISHYFRQHSFRERAIAH
VKNNTKLLSMCFIPALCNIVCICLEYLLLKHPMSVELPQTMTQFYIKMFLIFLNKQQGDC
AGDEETQLNYNKKAILGLFDLALRGLEEKKLVFYVDDIPEDVKEFASLHGLLTLFEVKTS
GTCPEVGYAFVHLSLQEFFAALCLMVSRRVDKNYLKKKFFLKSKWTLKNETKTEFMENFH
IFLSGLSSKECRTFLMLLAEQDEAWVQEKQDVILQSLKKLAATHLTGPKVLELCHCTFET
QNLEVAQHIGSLLNFKYEFKNFRLTTLDMSALVFVINSGQDLTCLDFAGCLVDLDCLEVL
AGCKNVEHLSFRSRRCGDDFAAALSKGLQGMGSLRKLELTGGSITAEGMTDLVQSASHCL
QLEEINLQGNRIRDPEVKRVMDLFSRMEKLKKVDLSNNHLSLNAVLSLAKEGIVCQNVTE
LCVRVDTAIIYFSGASEKGPRSLDLKLEENKEHVIPTRHVKLCLQDHRLSSQHAKRIVAI
LQSCSCLSEVDLSGNKLGDEGCSCLLESLTYIPISKQLNLSQNRLSVTGICNLLKSVNTC
PKVMEVQVSLCRDTAVLRFREDRKFASIPPREESVFSTDDQQHGEETQATNNPPKIRLTD
CNFQASDLKNLCAVLKECGRISELDLSRNYLGDEGLLQLFQCLPKLKMLRSLKFNNNQIS
LNSVFFLAQSLSTLQHIKTVSLSLGRTQVVHLTFWERVRSTGRWRSGSLAHPKQEAKGRC
FCLRDCRVGPEDVTRLCQILAQCPQLTEIDLSGNSLSVQSIERLLSFLPSLCHLTLLSIR
KNPLSPHCAVLFLNSINLCERVRVVEVWSSENAFLHLGASMRSQRTSCRLMGCAIGEGQV
EELCNVLEQHGWLEEVDLSRNQLGDEGLRCLLDHLHRVPGTCSLNLSHNGISQDGVLHLI
NAFVTSGNTTEVQVSLCSKATLIIKLTRGDDPRKILRLAECNFQPEHLEKLFSLLEKCTG
LTEYTSSNNNVTVQAAERLLHSLSKDLGLLKISIEEPWVCTERVMNLLELAVQVSGNITE
ITICKDKTLFQLVISFPNCLEKVESVVSRLSLYKPEIKNSSFCQRLCEKCAQLQELRWSH
VELHEDEAEMLVRILLPLPELKMFGLTSSSVTPTGIDYLISGLQNCQAIEELNLEYMKLS
SAAIPELVLGLCEMPSLKRLSLNHNSIGNDGCSRLAGTLRNMHNMEEINLSHNKIGDPGL
INLAAVLLEMQNLKKVDLSGNCPSPAGGEKLMEALAHCKHVKELLLSRNGFGDRTAVTLA
LCLPHMTKLKILHFQNNNIGQAGGLELARALVVCGLLEEISLAENHLGEQSIHALSEGLP
CFKHLQKIDLKFCGITDAASRSLSLGFRQCPSMEEIILSWNALGDGGARELATALPEMTK
LKVLDLEKNRIGACGAKKLAEKLAKCPEIQFIRLWDNPVPKGLAESLTRQDSRLCFSFN
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccccatttcaggatgacgatctggacctgagagcagctgtagcaagagcccgg
ccccagctcgtggagttcctcagtcactgtcccgactggctgctcatgacttcccagcac
tttgtccctgaggtggccctgagcagcctgggtggcatcactgaccacaaagaaaaagcc
tcagtgctccttgacctgctggaggaggctggtcctgctgcctggaaacactttgcacag
tccgtctgcatggagtatgacctgcccctggatctggagatcctgctcatgagttctgca
ggagaaggcaacttcagccagacagaagaagcatccacagatacgagagcccagtcatct
gtgccgaaagggtctgctcgccgtcgccattgcagcagctctgggggtgacaaggatgcc
aaacagcaacgactggattcatctgcgaagtaccggcatctcctcgtcgattctatccgc
cagagatacggaagcaggagagaagcaggagcagaagcacaggaacaaacacagccacct
ttcaaccaagcctttgtcaacgttgtcattcgtcagagaaaagtctcccgcttaaaagag
agaacagagaaaccccgagaggatgtggcaggtgctcctgagccagaagaatgtgcagat
acagccatgaaagtgtcagatctgttttgtagtgaggccccatcgggcacgacgaaggtg
gtcgttttgtttggtaaaccaggtacaggcaagaccaggctaatgcacaggatttgtcag
aaatgggcagaaggtgtcctacctcactttctcttcactttcctatttgagtttcggcag
ctgaatttgttgaaaagaaaattgaccctgaaggagcttttgtttgacatgttccttcag
ccagaggacagccctgatgcagtgttccaggacctcctggagaatgcccagcagacactg
atcatctttgatgggctggatgagtttgcagctaacatggatgtgtcgttgtcctctaag
agaggcccagctgttacctctcctatgtccatagcccagctctttgcagacctttgtcac
gggaagctcctgcctggttgcacagtgctagtcaccagccgacctaagaggctacctgac
ttcttattatatgcagtaggtgtgttggcagaaatttggggatttgaccataagaaggtt
gaggaatatatcagccactattttcgtcagcattcattccgagaacgagccattgctcac
gtgaagaacaacaccaagctcctcagcatgtgcttcatccctgctctgtgtaacattgtg
tgcatctgcttggagtatttgctccttaaacacccgatgagtgtggagcttccccagact
atgacacagttttatatcaaaatgtttctcatcttcctaaacaaacagcagggagactgc
gcaggcgatgaggagactcagctgaactataacaaaaaggccattttgggtctgtttgat
cttgcactgagaggcctagaagagaagaaacttgtattttatgttgatgatattcccgag
gatgtgaaggaatttgcttccttgcatggattgctgactctatttgaggtgaagacgagt
ggcacttgcccagaggttggctatgcctttgtgcacttgagcttgcaggagttttttgca
gcactgtgtctcatggtgagtaggagggtggacaagaattacttgaagaagaagttcttc
ttgaagtcaaaatggactttaaagaatgagacaaagaccgagtttatggagaattttcac
atatttctctcgggcttgtcgtcaaaagagtgtaggacatttctcatgctgctagcggag
caagatgaagcatgggtgcaggaaaagcaggacgtgatcctgcaatctctcaagaaactg
gcagccactcatctgacagggcctaaggttcttgagctctgccactgtacctttgaaact
caaaaccttgaagtagcccagcacattgggagcctgctgaatttcaagtatgagtttaaa
aactttagactgacaactctggacatgtcggctttggtttttgtcataaactcgggccag
gatttgacttgtttggattttgcaggatgtcttgtggaccttgactgtttggaggttctg
gctggctgtaagaatgtggaacacttgagctttcgtagcaggagatgtggcgatgacttt
gctgctgctctttcaaagggcttacaaggaatggggagcctgaggaaattagagttgaca
ggcgggagcatcacagctgaggggatgactgacttggtccagtctgcatcacactgcctc
cagcttgaggagataaacttgcagggcaatcggatacgggacccagaagtgaagagggtg
atggacctgttttccagaatggaaaagctgaagaaagtggacctgagcaacaaccatctt
tccttgaatgctgttctcagtttggcaaaggaaggcatcgtgtgtcaaaatgttactgaa
ctgtgtgtcagggtggacaccgcgattatttatttttctggcgcatctgagaaaggtcca
agatctttggatttgaagttggaagagaataaagaacatgtaattccaactagacacgtg
aagttatgcttgcaggatcacagactgtcttcccaacatgccaagaggattgtggccatt
ctccagagctgttcctgtctctctgaagtggacttatcaggcaacaagcttggagatgaa
ggctgcagttgcctgctggaaagcctcacctacataccgatttcaaagcagctgaatctc
agtcaaaaccgcctctctgtcactggcatttgcaacctgttgaagtcagtaaatacctgc
ccgaaggtgatggaggtgcaggtcagcctctgtcgtgatactgcagtcctgaggtttaga
gaagacagaaagtttgcttccattcctcctagggaagagtctgtgttctctactgatgac
caacaacatggggaggaaacccaggcaactaacaatcccccaaaaataagactgacagac
tgtaattttcaagccagtgacctgaagaatctgtgtgcagtcctgaaggaatgtggccgc
atctccgagctggacctatcacgtaattatctgggagatgagggacttctgcagctgttt
cagtgcctgccaaaactgaaaatgttacgttctctcaagtttaacaacaaccagatctcc
ctgaactctgtgtttttcttagctcagtccttatctacactgcaacacattaaaacagtg
agcctcagcttaggacgcacacaggtggttcatctgaccttttgggaaagagtcagaagt
accggcagatggagaagtggttccctggcacatcccaagcaggaagcaaaaggacggtgc
ttttgtctcagggactgcagagtgggtccagaggatgtgactaggctgtgccagatcctg
gctcaatgtccccagctgacagaaatcgatctgtctggaaattcgttgagtgtccagagc
attgagagattactgagctttctgccatccctctgtcatctgacactgctgagtattagg
aaaaaccccttgtccccacactgtgctgttttgttcctcaactccatcaacctctgtgag
cgggtcagagtggtggaagtctggtcaagtgaaaatgccttcttgcacttaggagcaagc
atgcgaagccaaaggacatcctgcaggctgatgggctgtgccattggggaagggcaggta
gaggagctctgcaacgtcctggagcagcacgggtggctggaagaagtagatctctccagg
aatcagctgggagatgaaggcctgaggtgcctcttggaccacttgcatcgagtgcccggt
acctgttccctcaatctcagccataatgggatttctcaggatggagtcctgcatctcata
aatgcctttgtcacatctggaaacactactgaagttcaagtcagtttgtgctccaaagca
actttaatcatcaagctgacaaggggagatgacccaagaaagattttgagactggcagag
tgcaactttcagccagagcacttggaaaagctgttctcgctcctggaaaagtgcactggt
ctgacagagtacacgtcctcaaataacaacgtgacagtccaagctgcagaaagacttttg
cattccctgagtaaagatctggggctgctgaaaatcagcatagaagagccatgggtgtgc
acagagagagtcatgaaccttcttgagctggctgtccaggtctctggaaacattactgag
atcacgatatgtaaagataaaaccctcttccaattagtcataagtttcccaaactgcctg
gagaaggtagaatcagtcgttagcagactgagtctgtacaagccagaaatcaagaactcc
tccttctgccaaaggctttgtgaaaaatgtgctcagcttcaggagctgagatggtctcac
gtggaactccacgaggatgaagcagaaatgctagtcaggattttgctaccccttccagaa
ctgaagatgtttggactgacctctagcagtgttacaccaactggaatcgattatttgatc
tcaggcttgcagaattgccaggccattgaagagctcaacctggaatacatgaaactcagc
agtgctgccatccctgagcttgtgctggggctttgtgagatgccatccctgaaaaggctt
agcttgaaccacaacagtattggtaacgatggctgctccagactcgcaggaaccttgagg
aatatgcacaacatggaggaaatcaatttaagccacaacaaaattggagatccaggccta
ataaatcttgctgctgtcctgctggaaatgcaaaacctgaagaaagtcgacctttcaggg
aattgtcctagtcctgctggaggggaaaagctgatggaagctcttgcccattgcaagcac
gtcaaggagttactactatcaaggaatggttttggagataggacagcagtgacacttgcc
ctctgtctgcctcacatgaccaagctgaagatcctgcacttccagaacaataacatcggg
caggcaggagggctggagctggccagagccctggtggtgtgtgggctgctggaagagata
agtttagcagaaaatcaccttggggaacagagtatccatgccctgtctgaggggctgccg
tgcttcaaacacctccagaagatcgacttgaaattctgtggaatcactgatgctgcttca
agatcactctctcttggcttccgacaatgcccttccatggaggagataatactgtcctgg
aatgccctgggagatggaggagcccgagagttggccactgctctcccagagatgacaaag
ctgaaggtgttagacctggagaaaaaccgtattggagcctgtggggccaaaaagctcgcg
gagaaacttgccaagtgcccagaaattcagttcataaggctgtgggacaacccagtgccc
aagggcctcgctgagagtttgacaagacaagactcaagactgtgtttctccttcaactag
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