Aphelocoma coerulescens (scrub jay): 138117221
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Entry
138117221 CDS
T10543
Symbol
NUDT21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138117221 (NUDT21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138117221 (NUDT21)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
138117221 (NUDT21)
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GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
138117221
NCBI-ProteinID:
XP_068883403
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Position
11:8481278..8488634
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AA seq
227 aa
AA seq
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MSVVPPNRSQTGWPRGVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtgccgcctaaccgctcgcagaccggctggccccgcggggtgaaccagttt
gggaacaaatacatccagcagacgaagccgctcacgctcgaaaggaccatcaacctgtat
cctctgaccaactacacgtttggcacaaaggagcctctgtatgagaaggacagttctgtg
gcagctcggtttcagcgcatgagagaagagtttgacaagattggcatgaggcggacagtg
gaaggggttctgattgtgcatgagcacaggctgccccacgtgctgttactgcagctgggt
acaacttttttcaagctacctggtggtgaactcaatccaggagaagatgaggtagaaggg
ctcaaacgcttaatgacagagatactgggtcgtcaggatggtgttcagcaagactgggtg
attgatgactgcattggcaactggtggagaccaaacttcgaacctccacagtatccctat
atcccagctcatattacaaagcctaaagaacacaaaaagctttttttggtccagcttcaa
gaaaaggctttgtttgcagtccccaaaaattacaagctggttgcagcaccattgtttgag
ctctatgacaatgcgccaggatatggacccattatttccagccttcctcaacttttgagc
aggttcaactttatttacaactga
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