Aphelocoma coerulescens (scrub jay): 138117352
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Entry
138117352 CDS
T10543
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
138117352 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
138117352 (NISCH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_14
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
138117352
NCBI-ProteinID:
XP_068883665
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All DBs
Position
12:complement(6065727..6095116)
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AA seq
1429 aa
AA seq
DB search
MEAAAGGEDGEEPPREARVLGSELVETYTVYIIQVSVGNHQWTVKHRYSDFHDLHEKLVS
EKKIDKNLLPPKKIIGKNSKSLVEKRQKELEIYLQTLLLKFPVTAPKVLSHFLHFHLYEI
NGITAALAEELFHKGEQLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHILD
FTCRLKYLKVTGTGGPFGTSNIQEHLLPFDLSIFKSLHQIEISHCGGKLIKGLTSSKHAL
ATLSVRFSATSMKEILVPEASEFDQWEPEDALDNSSCPVTAIIPTWRTLTTLDMSHNSIS
EIDDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKTL
NLAGNQLERLCGLNKLYSLVNLDLSNNKIEQIEEVKNIGSLPCLEKVVLSSNPLSIIPDY
RTKVLAQFGDRASEVCLDNIVTTEKELDTVEVLKAIQKAKEVKYKLSTSDKKISEDSRLT
AASSKSNCSSLTVRPSSPSLPRPVSSSQEIICEETVLASSFLQSSGSTPTDHTVPQRCFE
IPDSRCKIQAPASLLDSCKECDGGHHVCLESSEEEHCAVPDPCNTIILPFNCMSYTATNQ
DFIQHLSALIVQAVQKSAPSLTENKGSPAGNSTATDKEDGYFEMGLHEGDQTFEFSTTSD
TQSSDNIAVESVDIVKILWSFSIHIHKGLRQFASCLVLTDEMLAVFEIPHQELRGNCQHI
PSALKLMLCFPYTDLIEFGFLLPEICLTLKLKNSDNCLFIVSDSQNLQDFYSCLQTYCSR
HYTSVLPSSTWYCRKANLQEFLCHLMELNCISAEDVEIKGCFPTYLVYGNKTNAQKVLHQ
PESAGNNKEWSKNVLCSALYSSVYKSSDQSPCVVHPCWIFLTPQHLYIVKVDFSLLPGKW
VGTEELGSVFKLNRIPLASLVLHPTHGAMQQKGSFLDGHVLELLVGYRFVTAVFVLPHEK
FHFLRIYSLLRTLLQDVKTIIIFKASSKLDAVRNHVVEANRHGQAASFCKPHLTLSSLYP
SEFLIQKITEDNQVPVHLHVSVSLQYVAGLKGRALVEFFHSNIAEVENEELRHLMWSSVL
FYKTPSVEVMACVLLSTKAIYFLLDDSFIHADEHQSVIYTSLTDFWNKENSDCENSSFHL
SCCFVLKLNDLQSVNVGLFDQYFRITGRSADHIVTCLTRDSYNTHTFIQQLMAVLSLLAR
TPSPEPVDKDFYSEFGSKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMDGLTN
LPSLNILLYVLAFQVNHVEGSAQNTSSLQPKTLILTSSDLFLFDEDYISYPLPEFAKEPP
KRDKYQLADGRRIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGETDSVPKG
NCKQEGSRSREIQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcgggaggcgaggacggcgaggagcccccgcgggaggcccgagtcctg
ggctccgagctggtggagacatacacggtgtacattattcaggttagtgttggcaatcat
cagtggacagtcaaacatcgttacagtgatttccatgatctgcatgaaaagcttgtttca
gaaaagaaaatagataaaaatctgttaccacccaagaagatcattggaaaaaattccaaa
agcctggtggaaaaaagacaaaaggaactggagatctacctgcaaactctgctgctcaag
ttccctgttactgcaccaaaagttttgtcacacttcctacactttcatttatatgagatc
aatgggatcaccgctgcattggctgaagagctctttcacaaaggagagcagctcttaatg
gctggagaagtcttcaccatcaggcccctgcagttgtacgctgtcactcagcagctgctg
cagggcaaacctacctgtgctaatggagatgccaaaacagatctagggcatattctggat
ttcacttgcagactcaagtatctaaaggtcactggaacagggggaccttttggaaccagt
aacattcaggagcatctcttgccttttgatctgtctattttcaaatcgcttcatcaaata
gagatcagtcattgtgggggaaagcttatcaaagggctgacttcatcaaaacatgctctg
gccacactgagtgttcgattttcagcaacatcaatgaaggaaatcctggtgcctgaggcc
tctgagtttgatcagtgggagccagaggatgcactggacaactcaagttgtccagtgaca
gcaattatcccaacctggagaactttaacaactttggatatgagtcacaatagcatctct
gaaattgatgattcagtgaaattaattccaaagattgagttcctggatttgagtcacaat
ggggtgtctctggtagaaaatttacagcatctgtacaaccttgttcacctggacttatcc
tacaacaaacttacatcactagaaggtgttcacacaaaactgggaaacatcaaaactctg
aatttagcaggaaatcaactggaaaggctgtgtggtcttaacaaactgtactcattagtc
aacttggatctgagcaacaacaaaatagaacagattgaagaagtaaaaaatattggcagc
ctgccatgcttagaaaaggtggtattgtccagcaatccattgagcatcatccctgattac
cggaccaaagtacttgctcagtttggagacagggcctcagaggtttgtttggataacatt
gttaccacagaaaaggaactagacacagtggaagtgctaaaagctattcaaaaagcaaag
gaggtgaaatacaaactgagcacctctgataaaaagatcagtgaggactccaggctcact
gctgccagctccaaatcaaactgttcttctcttactgttcgtccttcctctccctctctg
cctcgtcctgtcagctccagccaagaaataatttgtgaagaaacagtcctagccagcagt
tttttgcaatccagtggttcgactcctacagaccatacagttccccagagatgctttgaa
ataccagactccagatgtaaaattcaggcacctgcctctttattggattcatgcaaagag
tgcgatggtggtcatcatgtgtgtttggagagttcagaggaagaacattgtgcagtgcct
gacccctgtaacaccatcatcttgccttttaattgtatgtcctacactgccaccaaccaa
gactttatccagcacctttctgccttgatagtgcaggctgtgcagaaatctgccccctcc
ctcacagagaataaaggaagccctgcaggtaattccacagccacagacaaagaagatgga
tattttgaaatgggacttcatgaaggagatcagacttttgagttcagcactacttcggat
actcagtcatccgacaacatagcagtggagagtgttgacatagtcaaaattctctggagc
ttttctattcacattcataaaggactcagacagtttgcttcctgtttggttttgaccgat
gagatgctagctgtgtttgagattcctcatcaggaattgaggggaaattgccagcacatc
ccttctgccttgaaattaatgctgtgttttccatacaccgatctaatagaatttggcttt
ctgttgccagaaatctgtttaactctgaagctgaaaaacagtgacaactgcttgtttatt
gtttcagactcccagaatcttcaagacttttattcctgtttacaaacgtattgctctcga
cactacacatcagtgttaccaagctccacatggtactgtaggaaagcaaatctccaagaa
tttctctgtcaccttatggaattgaattgcatttcagcagaagatgttgaaataaaaggt
tgtttcccaacatatcttgtttatgggaataaaaccaatgctcagaaagtcttgcatcaa
ccagagtcagctggcaataacaaggaatggtcaaagaacgttttgtgttctgcactttat
tcttcagtatataaatcttctgaccagagtccctgtgtggtccatccatgttggatattt
ctaacaccccagcatttgtacatagtaaaggtggattttagtttactgccaggtaaatgg
gtaggcacagaagagttgggaagtgtatttaagctgaatagaattccgttggcatcactc
gtgttgcatccaactcatggtgccatgcagcagaagggttcatttttggatggacacgtg
ctggagctgcttgttggatacagatttgttacagcagtgtttgttctacctcatgagaaa
ttccacttcctaagaatctacagccttttaaggacactcctgcaggatgttaagactatt
attattttcaaagcttcaagcaaattggatgctgtaagaaatcatgttgtggaggcaaac
agacatggtcaggcagccagtttttgcaaacctcatctgacactgtcatctttataccca
tctgagtttcttattcagaagataacagaagacaaccaggttcctgttcaccttcatgtt
tctgtgtctctgcagtatgtggctgggctgaagggaagagccctggttgaattcttccat
agcaacattgcagaggtggaaaatgaagagttgagacacctcatgtggtcttcagttctg
ttttacaagactcccagcgtggaagtgatggcctgtgtgcttctctcaacaaaagctatt
tactttctgttggatgattctttcattcatgcagatgagcaccagtcagtcatatatact
tctttaacagatttttggaacaaagaaaactcagactgtgaaaatagttcttttcatctc
tcttgctgctttgtgctaaaacttaatgacctgcagtcagtaaatgttggcctgtttgac
caatacttccgaattactggacgttctgcagatcacattgtcacctgcctgacaagagac
agttacaacactcacaccttcatacagcagcttatggcagtcctgtcactgcttgcacgc
actccttcacctgaaccagtagataaggacttctactctgaatttgggagtaaaaacaca
ggaaaaatggagaattatgaactgattcactctagcagagtaaaatttatttatccaaat
gaagaggaaattggggaccttgcttttctagtggcagagaagatggatggtttgaccaat
cttccatccctcaacatccttctgtacgtgttggcatttcaagtaaatcatgttgaagga
tctgctcagaacactagttcacttcaacctaaaacactgatattgaccagctctgatttg
ttcctctttgatgaagattatatcagttacccactacctgaatttgctaaggagccacca
aagagagataagtatcagcttgcagatggaagacgaatccgggatttagatagagtcctc
atggggtatcagacatatccacaggcccttacatttgtgtttgatgatgttcagaatcag
gacctgatgcagaatttaacactggatcactttggagaaactgatagtgtcccaaaggga
aattgtaaacaagagggcagcaggagcagagagatccagtggtacatttttatcccaagt
gcagaaagcagggagaaattaatttcattgcttgcaagacagtgggagatcctgtgtggt
agggaattgcctttagaactcactgggtag
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