Aphelocoma coerulescens (scrub jay): 138117391
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Entry
138117391 CDS
T10543
Symbol
RPUSD3
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X1
KO
K22537
mitochondrial RNA pseudouridine synthase RPUSD3 [EC:5.4.99.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
acoe03029
]
138117391 (RPUSD3)
Mitochondrial biogenesis [BR:
acoe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
138117391 (RPUSD3)
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
138117391
NCBI-ProteinID:
XP_068883748
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Position
12:complement(12340068..12342048)
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AA seq
309 aa
AA seq
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MPGVSLGAGAAVPPWRGPGAPPPPPRAGWRGWRRLLGPEETLRLLEGSVVHREGALLALN
KPPGLPVLGRPGDLSLDALLPALRQRLGLAPELHVVKAPARVYSGLVLLSSCYHTTKKLQ
QFFTNARLRGQYPATYRAITVGIPAEVEGEIRTGLCWQQHGDRAMVVPVPAPGRRSLARK
DVKSTLTRYRVLGTVGGCALLQLQPRTAFPEQLQVHLTLLLCPALGDHKHSSRVGRVLGV
PFLTPETAPTRTQVLDEELLSRLGLSPQQLHHLPLHIHLQELVLPEGPLCAPPPPHFLHT
LRCLGLPEH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggtgtcgctcggcgcaggcgcggcggtgccgccatggcggggaccgggagcg
ccgccgccgccgccgcgcgcgggctggcgcgggtggaggcggctgctgggccccgaggag
acactgaggctgttggagggctccgtggtgcaccgggaaggagccctgctggcgctgaac
aagcccccaggcctccccgtcctggggcgccctggggacctgagcctggatgcactgctg
ccagcactgagacaacgcctgggcctcgctcctgagctccacgtagtgaaggctcctgcc
agggtgtattctggccttgtcctcctgtccagctgctaccacaccactaagaagctccag
cagttcttcaccaatgctcgcttgagaggccagtaccctgccacatatcgtgccatcacc
gtgggaatcccagcggaggtggagggtgagatccgcacggggctatgctggcagcagcat
ggggacagagccatggtggtgccagtgccggccccaggacgccgcagtctggccaggaag
gatgtgaagagcaccctgacacgataccgggtgctgggcactgtggggggctgtgccctc
ctccagctccagcctaggacggccttcccagaacagctccaggtgcacctgacactgctg
ctgtgcccggccctgggcgaccacaagcactcttcccgtgtgggcagggtgctgggagtg
ccctttctgacccctgagaccgccccaacccgcacacaggtgctggacgaggagttgctg
tcccggctgggcctttctccacagcagctccatcacctcccactccacatccacctgcag
gagctggtgttgcctgagggccccctctgtgcccccccaccaccccacttcctgcacact
ctgcgctgcctggggctgcctgagcactag
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