Aphelocoma coerulescens (scrub jay): 138117420
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Entry
138117420 CDS
T10543
Symbol
BRPF1
Name
(RefSeq) peregrin isoform X1
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138117420 (BRPF1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
138117420 (BRPF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
138117420
NCBI-ProteinID:
XP_068883807
LinkDB
All DBs
Position
12:12312077..12323962
Genome browser
AA seq
1210 aa
AA seq
DB search
MGVDFDVKTFCHNLRATKPPYECPVGTCRKIYKSYSGIEYHLYHYDHDNPPPPQHTPLRK
HKKKGRQARAANKQSPSPSETSQSPGREVMTYAQAQRMVEVDLHGRVHRISIFDNLDVVS
EDEDVPEEVPENGSNKENTETQSVPPKSGKHKNKEKRKDSNHHHHNASASTTPKLPEVVY
RELEQDTPDAPPRPTSYYRYIEKSAEELDEEVEYDMDEEDYIWLDIMNERRKNEGVSPIP
QEIFEYLMDRLEKESYFESHNKGDPNALVDEDAVCCICNDGECQNSNVILFCDMCNLAVH
QECYGVPYIPEGQWLCRRCLQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVC
FANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYM
KMEPVRETGANGTSFSVRKTAYCDIHTPPGSVRRLPALSHSEGEEEDEEEEEEGKGWSSE
KVKKAKAKSRIKMKKARKILAEKRAAAPVVSVPCIPPHRLSKITNRLTIQRKSQFMQRLH
SYWTLKRQSRNGVPLLRRLQTHLQSQRNCDQRDTEDKNWALKEQLKSWQRLRHDLERARL
LVELIRKREKLKRETIKVQQVALEMQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVP
DYLDHIKKPMDFQTMKQNLEAYRYLNFDDFEEDFNLIINNCLKYNAKDTIFYRAAIRLRE
QGGAVLRQARRQAEKMGIDFETGMHFPHCVTVEEAQIQDIEDEDVRLLLSENQKHLPLEE
QLKILLERLDEVNAGKQSIGRSRRAKMIKKEITVLRRKLAHPRDLGRDGLERHSSSARGV
LQSHNPCEKDLQTDSAAEESSSQETGKGLGPNSSSTPAHEVGRRTSVLFSKKNPKTAGPP
KRPGRPPKNRDSQITPGHGNSPIGPPQLPIMGSSQRQRKRGRSPRPSSSSDSDSDKSTED
TTMDLPANGFSSGNQPVKKSFLVYRNDCNLPRSSSDSESSSSSSSSAASDRTSTTPSKQG
RGKPSFSRVNFPEDSSEDTSGTENESYSVGTGRGVGHGMVRKGMGRGAGWLSEDEDSSLD
ALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYL
VLFFDNKRTWQWLPRTKLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRAMQHRNKVQG
EQSSDSSESD
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtagacttcgacgtgaagaccttctgccacaacctgcgggccaccaagccgccc
tacgagtgcccggtgggcacctgccgcaagatctacaagagctacagcgggatcgagtac
cacctgtaccactatgaccacgacaacccgcccccgccccagcacacccccctgcgcaag
cacaagaagaaggggcgccaggcccgcgccgccaacaagcagtcgcccagcccctccgag
acctcccagtcgcccggccgagaggtgatgacctacgcccaggcccagcgcatggtggag
gtggacctgcatggccgcgtccaccgcatcagcatcttcgataatctcgacgtggtgtcc
gaggacgaggatgttcccgaggaggtacccgagaatgggagcaataaggagaacacggag
acgcagagcgtcccgcccaaatctgggaagcacaagaacaaggagaagcgcaaggattcc
aaccaccatcaccacaacgcctcggccagcactaccccgaagctgcccgaggtggtgtac
cgagagctggagcaggacacccctgacgccccgcctcgtcccacctcgtactacaggtac
atcgagaagtcagcagaggagctggatgaggaggtggagtatgacatggatgaggaggat
tacatctggctggacatcatgaatgagaggcggaagaacgaaggtgtgagccctattccc
caggagatctttgagtacctgatggaccggctagagaaggagtcctactttgagagccac
aacaagggggacccaaacgccttggtggatgaggatgccgtctgctgcatctgcaacgat
ggggagtgtcagaacagcaacgtcatcctcttctgcgacatgtgcaacctggctgtgcac
caggagtgctatggggtgccctacatccctgagggacagtggctctgcagacggtgcctg
cagtcaccctcgcgcgctgtggactgtgccctctgtccaaacaaggggggggccttcaag
cagacggacgatgggcgctgggcacacgtggtctgtgccctctggatcccagaggtgtgc
tttgccaacactgtcttcctagaacccatcgacagcatcgagcacatcccgcccgcacgc
tggaagctgacctgttacatttgcaagcagcgcggctctggggcttgcatccagtgtcac
aaagccaactgctacaccgccttccatgtcacctgtgcccagcaggccgggctgtacatg
aagatggagcccgtccgggagacgggtgccaatggtacctccttcagtgtgcgcaaaact
gcctactgcgacatccacacaccgccaggttctgtgcgcaggcttcccgccctctcccac
agtgagggagaagaggaggatgaggaggaagaggaggaggggaagggctggagttctgag
aaagtcaaaaaagcaaaggccaagtctaggatcaagatgaagaaggcacggaagatcctg
gcagagaaacgagctgcagcgcctgtggtttccgtgccctgcatccccccccacaggctc
agtaagattacaaaccgtttaaccatccagaggaagagccagttcatgcagaggctgcac
agctactggactctgaagagacagtcccgcaatggtgtccccctgctccgccgccttcag
acacacttgcagtcacagagaaactgcgaccagagagacactgaggataagaactgggcc
ctgaaggaacagctgaagtcatggcagcgcctgcgccatgacctcgagcgtgcgcgcttg
ctggtggagctgatacgcaagcgggagaagctcaagagagagacgatcaaagtgcagcag
gtggcactggaaatgcagctgacccccttcctcatcctcctccgcaagacacttgagcag
ctgcaggagaaagacacgggcaacatcttcagtgagccggtccctctgtctgaggtccca
gactacctggatcacatcaagaagccgatggattttcagacaatgaaacaaaatctggaa
gcctatcgctatctgaattttgatgactttgaggaggatttcaacctgattattaacaac
tgtttgaaatacaatgccaaagacacaatcttctaccgggcagccatccgtctgcgggag
cagggaggtgctgtgctccggcaggctcgccggcaggcagagaagatgggcattgacttt
gagacaggcatgcacttcccccactgtgtaacagtggaagaggctcagatccaagacatt
gaggatgaagatgtgcggctgctgctctcggagaatcagaagcacctgcccttggaggag
cagctaaagatcctgctggagcggctggatgaggtcaatgctggcaagcagagcatagga
cggtcccgccgggccaagatgatcaagaaggagatcacagtcctacggcggaagctcgca
cacccgcgggacctgggccgcgatgggctggagcggcacagctcctctgccaggggagtc
ctgcagtcccacaacccctgtgagaaggacctgcagacagacagtgctgcggaggagagc
agcagccaggagactggcaaaggtctgggtcccaattcttcttctaccccagcacatgaa
gttggcaggaggacctctgttctcttctccaagaagaaccctaaaactgcaggccctcca
aaacgtccaggacgccccccaaagaatcgagacagccagatcactcctgggcatgggaac
agccccattgggcccccccagctgccaataatggggtcctcccagcggcagaggaagaga
gggcgaagcccgcgccccagctccagctcggacagtgacagtgacaagtccacagaggac
accaccatggacctgccagccaacggtttcagcagcgggaaccagcccgtgaagaagagc
ttcctggtgtaccgcaacgactgcaatcttccccggagcagctccgactcggagtccagc
agcagcagcagcagcagtgctgcctcagaccgcaccagcacaacgccctccaagcagggc
agagggaaaccctccttttcccgagtgaacttcccagaggacagcagtgaggacacatca
gggacggagaatgagtcctactccgtgggcacgggacgaggcgtggggcacgggatggtg
cgtaagggtatggggcgtggcgcggggtggctgtctgaggatgaggattcctccctggat
gccctggacctggtgtgggccaagtgccggggttacccctcctacccagcgttgatcatt
gaccccaagatgccgcgggaaggcatgttccaccatggtgtccccatccccgtgcccccc
ttggaggtgctgaagctgggggagcagatgactcaggaagcacgcgagcacctctacctt
gtcctgttcttcgacaacaagcgcacttggcagtggttgccccggacaaagctggtgcct
ctgggggtgaaccaggacctggacaaagagaagatgctggagggccgcaagtccaacatc
cggaagtcggtgcagatcgcctaccaccgcgccatgcagcaccgcaacaaggtgcagggc
gagcagagcagcgactccagtgagagcgactga
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