Aphelocoma coerulescens (scrub jay): 138117472
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Entry
138117472 CDS
T10543
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoe03009
]
138117472 (SHQ1)
Ribosome biogenesis [BR:
acoe03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
138117472 (SHQ1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
138117472
NCBI-ProteinID:
XP_068883924
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Position
12:complement(18064325..18104765)
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AA seq
606 aa
AA seq
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MITPAFELTQDPDFLTIKIRVPYARASEFDIYFEGEDFKFYAKPYFLRLTLPGRIVEDGR
EKASYNTDEGTFTIQLPKENPGQYFEGLDMLTSLLAPKKSRSAKPLVEEMATAASAELSE
DNEEEFDWEVEQIPYEESTPPLQHPYGFGNLRSGVFQRLQDELSDVIDIKDPDQTPAEER
RRKRLAAEAAKFDPDHYLADFFEDEAIKHLLKYKPWWIDAHKKMTALQGESHQEHDSPAF
VVFSEEEREQMRKFTNKSYILDKRSRHHVYLGLIDILLAYCYEICVNEGDKNVESSWNIR
KLSATLCWLESFSSIHDVLVSFGRRVLCYPLYRHFELVTRAFNDTVMILQLGKAAVLKCL
LDIHKIFMENDPAYILNDLFITDYCIWIQKVKSKKLAALCESLQKTTLSKSHMGLELEEL
EAAAVLVQEEEKALKAAGTVSKQQLLCSESETSDSEESSSTSSSETEGSDSDEQESSTSE
DGEINSFQGTLQEERTAPLIDCNGLRQGTNTSAVEVGDGKSKVSLQSTTPGKLVEELEMQ
IHSAMRLSEQPEGLATAGCISQEQEENPVPEPDRFSEDAAGKGNFLEVSPKPNPFLFLCS
TNEDED
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgattactccagcttttgaactgacccaggatccggattttcttactataaaaatcaga
gtgccttacgccagagcttcagagtttgacatttattttgagggggaagatttcaaattt
tatgctaagccatacttcctcagattgacgcttcctggaagaattgtagaggatggcaga
gaaaaagcatcttataatacagatgaaggtacttttacaattcagttacccaaggagaat
cctggccaatattttgaggggctggacatgctgacatctcttctagcaccaaagaaatca
agatcagcaaaacctttggtagaagagatggctacagctgcctctgctgagctatctgag
gacaatgaggaagaatttgactgggaagtggaacagattccttatgaagaaagcactcca
ccactgcagcacccctatggatttgggaatttgcgctcaggggtgttccagaggctgcag
gatgagctcagtgatgtcattgacattaaggatccagaccaaactcctgcagaggaacgt
aggaggaaacgtttggcagctgaggctgccaagtttgatcctgatcattacctagctgat
ttttttgaagatgaagctattaagcatcttttaaagtacaaaccctggtggattgatgct
cataaaaagatgacagccttgcagggagaaagtcatcaggaacatgacagtcctgcattt
gttgtcttctctgaggaagagagagagcagatgagaaagttcacaaataaatcttacatt
ctggataaaagaagccgtcaccatgtatatcttggattaattgatattcttctggcatat
tgctatgagatctgtgtcaatgaaggggacaagaatgttgaatcatcttggaacatcagg
aaactgagtgcaacattgtgctggctggagagtttctccagcatccatgatgtcctggta
tcttttggaagaagagtgctgtgctatcccctgtacaggcattttgagctggtgacacgt
gccttcaatgacacagtcatgattctgcagctgggaaaagctgcagttttgaagtgtctt
ctggacattcacaagatttttatggagaatgaccctgcttacatccttaatgatctcttc
attacggactattgcatctggatccagaaagtcaagtcaaaaaagttggctgcactgtgt
gagtccttgcagaaaaccacgctcagcaagtcccacatggggctggagctggaagagctg
gaagcagcagcagtgctggtacaggaggaagagaaggcgttaaaagctgctggcacagtt
tccaagcaacagctgctttgctccgagtcggagacaagtgactctgaagaatccagcagc
acttcatcatctgagacagaaggctctgattcagatgagcaggagtcctcgaccagcgaa
gatggggaaataaattctttccaaggcacgctccaggaggagaggacagctccacttatt
gactgtaatggattaaggcagggcacaaacacttcggcggtggaggtcggtgatggaaaa
tcaaaggtttccttgcaatccacgactcctggaaaactggtagaagaattagaaatgcaa
atccactctgcaatgagactttcagagcagcctgaaggattggctactgcaggctgcatt
tcacaggaacaagaagaaaaccctgtacccgagcctgacagattttcagaagatgctgct
gggaagggaaatttcttggaggtgtctcccaagccaaatccatttctttttctctgcagc
acaaatgaagatgaagactaa
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