Aphelocoma coerulescens (scrub jay): 138117543
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Entry
138117543 CDS
T10543
Symbol
BCOR
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138117543 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138117543 (BCOR)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
138117543 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
138117543
NCBI-ProteinID:
XP_068884094
LinkDB
All DBs
Position
1:7903587..7962379
Genome browser
AA seq
1767 aa
AA seq
DB search
MLSATPLYGNVHSWMSNERVRMCGINEDRKIPVNDGDAPKSRLELREENHLNHSVVDATT
AHRIDSLAALSMDRSGLMREGLRVPSSIVYSSLCGLGSEKSRDATGSIASLGFTPERNPE
IQFKSNPPEAVESAAVSGKAPNGFSAIYKTPPGIQKNSVPTGETLGLDRAAGDRQSPLGV
NGASYLRLPWVNPYMEGATPTIYPFLDSPNKYSLNMYKALLPQQSTYSLPQHLAYSPVCT
NGERFLYLPPSHYVAPHIPSSLASPMRLSTASASPAIPPLVHCPDKSLSWKMGVSPGNPV
DTHAYPHIQSSKQPRVPTAKPAPANLPADPALLLPHSPRPSPRLPLPTQVGDAYADFHKH
FPRITTSPSSAVTLPKPYVNISSEFPPARLSNGKLPKGSDAGEAPLPSAPHTRKAGHDRK
DSRSPPLLEKQTPTKDVTDKPLDLSAKVVDAETAGKSDHGKKIMPTVLVHGRAGGGTHLP
GSDIVQKETISPGNSCPIYRPEIISTAPSSWIVPGPSPSEEAGKNVQLKNKALDWVMPQP
RSSSCPRMGGTEAVVGSVSGTVSAGGRPASASPAPNANVDCAKTARSSAESTASVIQHVG
QPVATPAKHSTKVAKSCGQEANFKATETALASSPIFLPPNEAFRSPPLPYPRSYLPYPVP
EGIAISPLTLHGKGHVYPHPVLLPNGSLYPTHLAPKPGLPYSLPAGRGEFMTYQDALGVG
MVHPMLLQHSALEINKEEKTERRSRSHERVRYEDPALRGRLPELLESGGKMHFEMPGDKS
VKLHQSSGHSKNSAKSDKHLFPDLLRDEQEAKSEANAAKASFATESSNQTNDPTKHKVEQ
ASQHRDFIVMREEFGRNNDVHETYNFKQAQSSSVFGLRKEDLSVSQPKERVAVQPSPVFL
ESVHESDAPALAFGKVQEDAKPFCMGTAPPSIDANQTYTKDGADDAESADGKILKPKPSK
LAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAMM
RFSELEMKEREGQTATKDSEVCRFSQADWENLKGNSEKKPKSVALEDAIADQNDNDRCNF
TSTENNRGHFLETPEEKDLSNEKCYLERHSVYEKAEDQPTEDIGQHSCPRLDRKRKHSGE
RVQNDGSQNESFVDELQDEVISKAKKKKNSKDDWPEREMTNNSSNHLEEPNCNEVTNLKV
CIELTGLHPKKQRHLQHLRELWEQQVSPERSPSGKLGRQSRKDLAEAVQPEATAKVKDFT
EERHTKKRSEAKSNRSWSEESLKTSDNEQGLPVFPVSPHMKSLSSTNANSKRQAQPSCTP
ASRLAAKQQKIKESRKTDGLYTDEEEDFQHASLLPKYSECEKPSGKRQCKTKHLALQERR
RRSSLTGDDTTDIENAEDKVTVTRKVRKRPEPTSDCDSSPAKPYEQKPYERLPQTPSLLP
APQPAQLPIASPPQDTTPSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKA
CDVNHRDNAGYCALHEACARGWLSIVRHLLEYGADVNCSAQDGTRPIHDAVENDHLEIVR
LLLSYGADPTLATYSGRTIVKMTHSELMETFLTEYLTDLQGRSVDDPGLYWDFYGSSVCD
PKDESGFDVLANPPGPGDEDEDGFSDVFEFEFLDEPPLPCYNIQVCLSQGPRNWLLLSDV
VKRLKMSSRIFRCNFPNLEVVTITEAEFYKQTSLSQLFSCATDLEAFNPESKELLDLVEF
TSELKTLLGSELHWLHPHEDPPFDILW
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaactcccctgtatggcaacgttcatagctggatgagcaatgaaagggtc
cgcatgtgtggaattaatgaagacaggaaaattcccgttaatgatggtgatgcaccgaaa
agcagactggagttgagggaggaaaatcacctgaatcacagtgtggtggatgcgactaca
gcacatcgcattgacagtcttgcagctctgagtatggacaggtctggactcatgcgagaa
ggactcagagtccccagcagcattgtctattccagcttgtgcggacttggctcggaaaaa
tcacgggatgctacgggttcgatagccagcctgggatttactcctgaaagaaatccagag
atacagtttaagtctaatccccccgaagcggtggaaagcgcagctgtctctggaaaagcc
ccgaacggcttcagcgctatatacaaaacgccacctggaatacaaaaaaactctgtccca
acaggggagacactgggtttggaccgagctgcaggtgacaggcagagtccccttggtgtc
aatggtgctagttacctaaggctcccctgggtaaacccctacatggagggcgcaacgccc
accatataccctttccttgactcaccaaataagtattcgttgaacatgtacaaggcattg
ctacctcagcagtccacctacagcttaccgcagcacctggcttactcgcccgtatgtaca
aacggtgaacgttttttatacctgcctccctcccactacgttgcccctcacatcccttcg
tcgctggcatcacccatgaggctctcgactgcttcagcttcaccagcaatcccacctttg
gtgcactgtccggataagagcttatcgtggaagatgggggtgagcccaggcaaccctgtc
gacacgcatgcctacccccacatccagagcagcaagcagccccgggtccccaccgccaag
ccagcccctgccaacttgcctgcggatcccgcactcctgctgccgcactcgccccggccg
tcccctcgcctccccctgcccacccaggtcggggatgcctatgccgatttccacaaacat
ttccccaggatcaccacctctccctcctctgctgttacgctcccaaagccctatgtgaac
atcagcagtgaatttccacctgctcgcctctccaacgggaagcttcccaaaggcagtgat
gctggggaggcacccctgccatctgccccccatacacggaaggctggccatgaccggaaa
gacagcaggtctcccccactcctggaaaagcagaccccgaccaaagacgtcaccgacaaa
ccgctggacttgtcggcaaaagtggttgatgcagaaactgctggcaagtcagaccatggt
aagaaaattatgccaacggtgctggtgcatggaagggcaggaggggggacgcacttgcca
ggcagtgacatcgttcagaaagaaaccatttctcccggaaacagctgccccatctacagg
cctgaaattatcagcacggcaccatcctcctggatcgttcctggtcccagccccagtgag
gaggctgggaagaatgtccaactgaaaaacaaggcactggactgggttatgccacagccg
cggagttcctcctgccccaggatgggtggcacggaggcagtggtcggcagtgtttcgggg
acggtgtcagcgggggggcggccggcatcagcgtcaccagctcccaatgccaacgtggat
tgcgccaagacggcccggagctctgcggagagcaccgcctcggttatacagcacgtcggg
cagcccgtcgccactcctgcgaaacacagcactaaggtggccaaatcctgtggtcaggaa
gccaacttcaaggcaaccgagactgccctggcctccagccccatcttcctgccacccaac
gaggcgtttcgctccccacctctgccctaccccaggagctacctcccatatccagtgccg
gaggggattgccatcagccctctcaccctccatgggaaaggacacgtctacccacaccct
gtcttgctgcccaatggcagcctctaccccacccacctggctcccaaacctggcctacct
tacagcctgccagctggaaggggggagttcatgacctaccaggatgcgctgggagtgggg
atggtgcaccccatgctgttgcagcattctgctttggagatcaacaaggaggagaagaca
gaacggaggtcacggtctcacgagagagtccgctatgaggacccggctctgcggggccgg
ttgccagagctcctggagagtggtgggaagatgcatttcgaaatgcccggtgacaagagc
gtgaaattgcaccagagctctggccatagcaaaaactctgcaaaaagcgacaaacacctc
ttcccggatcttctgcgagacgagcaagaggctaagagtgaagcaaacgcagcgaaagcc
agctttgctacagaaagcagtaatcagactaatgaccctacaaagcacaaggtagagcag
gcgtcgcagcacagagattttattgtaatgagagaggagtttggaagaaataatgatgtt
cacgaaacctataatttcaagcaagcccagagttcatcagtgttcggcttaaggaaagaa
gatttatctgtgagccagcctaaagagagagtggcggtccagccttcgcctgttttcttg
gaaagcgtgcacgagagcgatgctccagctctggcttttggcaaggtgcaggaggacgca
aagccgttctgcatgggaactgctccgccaagcattgatgccaaccagacctataccaaa
gatggagccgacgacgcggagtctgccgatggcaaaatactgaaacccaagccgtcgaag
ttggccaagaggatcgcaaactctgctggttatgtaggtgaccgattcaagtgtgtgacg
actgaactctacgctgactccagccagctcagccgggagcagcgggcgttgcagatggaa
ggattacaagaggacagtattttatgtctacctgctgcttactgtgagcgtgcaatgatg
cgcttctcagagttggagatgaaagagagagaaggccaaacagctaccaaagactcagag
gtctgcagattcagccaggcagactgggaaaacttgaaaggaaacagtgaaaagaagcca
aagtctgttgctctggaagatgccattgctgaccaaaatgacaatgacagatgtaacttt
actagtactgaaaacaaccgaggtcactttctggaaactccagaggaaaaagatctctca
aatgagaaatgttatttagagaggcattctgtatatgaaaaggcagaagaccagccaaca
gaagatattggccaacattcatgtccacgtctggacaggaaacgtaaacactctggtgag
agagtgcaaaatgatggcagccaaaatgaaagctttgtggatgaactgcaggacgaagtt
atatcaaaagcaaaaaagaagaagaactccaaagatgactggcctgagagggaaatgaca
aacaattcctctaaccacttagaagagcccaattgtaatgaggtgaccaacctgaaggtg
tgcattgaattaacagggctccatcccaaaaagcagcgtcacctgcagcatcttagggaa
ctatgggagcagcaggtgtcaccagagagatccccgtccggcaagttgggccggcaaagc
aggaaagatttagctgaggctgttcagccagaggccactgcaaaggtcaaagacttcaca
gaagaaaggcacaccaagaaaaggtcagaggccaaaagcaatagaagttggtctgaagag
tccctcaaaacaagtgacaatgaacaaggcttgcccgtattcccggtgtctccgcacatg
aagagcctttcatccaccaatgcaaacagcaaaaggcaggctcagccaagctgtactcca
gcctcgaggttggctgccaaacagcagaaaattaaagaaagccggaagacagatgggctg
tacacagacgaagaggaggatttccaacatgcatctctgctgccgaaatacagcgagtgt
gagaagccatcagggaaacgtcagtgtaaaacaaaacacttggcactgcaggagaggaga
aggaggtcatctctgacaggggatgacaccacagatatcgaaaatgctgaagataaggta
acggtgacgaggaaagtcaggaagcgaccggagccgacttcagactgcgactcctcgcca
gccaagccgtacgagcagaagccgtacgagcgcctgccacagacgccctcgctgctcccc
gccccgcagcccgcgcagctgcccatcgccagccccccgcaggacaccaccccgagccgg
ccgatgccgcccgaagcgcggcgcctgatcgtcaacaagaacgcgggggagacgctgctg
cagcgggcggcacgcctgggctatgaggaagtggttctgtattgtttggaaaacaaggcg
tgtgatgtgaatcatcgtgacaacgcgggttactgtgccctgcacgaggcctgtgccagg
ggctggctgagcatcgtgcggcacctcctcgagtacggcgcggatgtgaactgcagtgct
caggatggaaccagaccaatccacgacgcggtcgaaaacgaccacttggaaattgtccgc
ctgttactgtcctatggtgctgatccaacacttgcaacctactctgggaggaccattgtg
aaaatgacccacagtgaactcatggagaccttcctcacagagtatttaactgacctgcaa
ggtcgaagtgttgatgaccctggtttgtactgggatttctatggcagctctgtgtgcgat
ccaaaagatgaatctggatttgatgtcttggcaaatcctcctggcccaggtgatgaagat
gaagatggcttcagtgatgtgtttgaatttgaatttttggatgagcctcccttaccgtgt
tacaacattcaagtgtgtctctctcagggaccacggaactggcttctgctctcggacgtg
gtgaagaggctaaaaatgtcatctcgcatcttccgctgcaacttccccaacctggaagtc
gtcaccatcacggaggcagagttttacaaacagacttccctcagccagttgttctcttgt
gctacggaccttgaagcctttaacccagagagcaaagagctgttggacttggtagagttc
acaagcgagctcaagactctgctcggctccgagcttcactggttgcatccgcacgaggac
cctcccttcgacatcctctggtga
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