Aphelocoma coerulescens (scrub jay): 138117721
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Entry
138117721 CDS
T10543
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510
Focal adhesion
acoe04512
ECM-receptor interaction
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138117721
NCBI-ProteinID:
XP_068884372
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Position
12:12412941..12426912
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AA seq
1930 aa
AA seq
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MLCLLPASLGTGHCCVTRGLPLACTFLCLTLAKARCGQVPPLAWHGCRRRRQAPAVLLQE
QQLSPARVQPEPSGPPTPQPTRATSHLPSTPGSHGHRQILWLPMDLLALALLLVGGQVAG
GWQDPDLSHGCARGSCYPATGNLLVGRAARLSATSTCGLDRPQEYCIVSHLQDSEKCFTC
DSRDPSLPESHRIENVIYLSSPHDRRTWWQSENGVEHVSIRLDLEGEFHFTHLIMKFKTF
RPAAMLVERSADFGRTWKVYRYFAHNCSKLFPGIPNHPSGLVDEVLCDQRYSEIEPSSHG
EVIFKVLDPSIPIADPYSPDIQDLLRVTNLRVNLTKLHTLGDNLLDSRQEVLHKYYYAVD
ELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGRCVCEHHTQGLNCERCEDFYQDLPWR
PAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRHCHLCKPFYY
RHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQCRCKENVSGPRCDRCQH
GAYGLSQGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVAGRSCSQCVPEFWGLSY
DLGGCRPCACDFGGAYNNRCSMEDGACPCRPHIMGRQCDQVQPGFFCAPLDYYTYEAEQA
TGHGHSHPQLPGAIREEVPQDCLEYDTREPGGRKGHSRHQRSPPRAPQSPVPLRRSRQQP
PKLDVEEVVRDSAGRMVTWTGLGFARVRDGAGLTFHVDNVPYPMDYELLLRYEPESAEDW
EAVVSVSSRVLPTSSRCGNLLPSEQMYRESLPHSQRYVLLSRPFCFEPSTPYEVTMRLQR
AGVTQRHPGAFILIDSLVLLPRVSELPGFHGAEAAARQEELERYQCLEVFRMAPPHPLAQ
ACARLVCSVSALMHGGALPCQCDPQGSRSSECQVQGGQCECKPHVVGRRCDRCAPGSYGF
GPLGCSPCTCSPEGSVSQLCDEVSGQCRCQPGTVGRQCDQCQPGHWGFPACRPCQCNGHA
EECDPRTGTCLRCRDHTDGRHCERCQDGYYGNPVLGSGQQCRPCPCPGYPGTRHYHGSAC
HADEETHHIVCLCAPGYAGPRCDRCSPGYFGAPEMEGGVCRPCQCNNNIDASDPEGCDPR
TGQCLRCLYHTAGPHCAQCQPGYYGNALQRSCRRCGCDPRGTLASHCTNGTCSCDRGTGA
CACRPNVVGKSCDRCAPHFWSLGGPRGCEPCGCHPTHALHPACDTVTGQCQCRPGFGGRV
CSQCQEHHWGDPEQECRACECEPLGAESPQCEQDNGQCRCRLGFGGLRCDRCQRGYQEPF
PHCSPCHPCFGHWDLVVGSLRDRLQRLGAQVQALREGGSALPLSPRRLRELEEALGHVEQ
LLGEGDSPGGPLLDGLPRQLGGTRMELDNFWKHLQELEQHLDLLAQADMQHHDRLAELSR
ELGGLNRTTSHLQILLGTIVAAGFSESYRSILASVEASRQAEVVANGTAGELSRAQMTRR
ATERVLRQRGDTFRRGTAAARKSLREAQKRVMGLNIARINEKICGAPGDQSCKHASCGGA
LCRDSAGTRRCGGIGCAGALPISARALSSAHNASQQLEEALGQLAVVAQKMQEVQELAQG
ARSWAEEALGRSQAARSHAEKATAQLRDFIRRIKAFLAEEGADPGSIELVARQVLNISLP
SSPRQIQELLREMRESIGQLQGVDAVLNSTAEGLAVARDLLAQGQEARQRAEGIRDELAG
TQQALEVARTQAMTAGSTLRSARDAIRVAENRAREAERRLQVLDRKESQAQRRLQELARH
ITALQEHGRDAHHMAQQAKEGAQRATTTSGTLSQDLAQVTQRYVVLKNQVGMLDRVSGGA
LQRVSQLTAEAQDLLDKASNSKRKLEDLEQRFGANERAMAEKVTRLQALEQQVTGLLQEI
RERANAYATC
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccttctcccggccagcctaggcacaggacactgctgtgtcacacgtgggcta
ccgctagcgtgtaccttcctctgcctcaccttggctaaagctcggtgcgggcaggtccct
ccccttgcctggcacggctgccggaggaggagacaggcaccggccgtcctcctccaggaa
cagcagctgagcccagcccgagtccagcccgagcccagcgggcctccgactccgcagccc
acccgggccaccagtcacctgcccagcaccccaggctcccacgggcacaggcagatcctg
tggttgcccatggacctcctggcacttgctctcctcctggtggggggacaggtggcaggg
ggctggcaggaccctgacctgagccatggctgcgcccgtggcagctgctacccggccact
gggaacctgctggtggggcgagccgcccgcctaagtgccacctccacctgcgggctggac
aggcctcaggagtactgcatcgtcagccacctccaggattcggagaaatgcttcacctgt
gactcacgtgacccgtccctgcctgagagccaccgcatcgagaatgtcatctacctgagc
agcccccatgaccgacggacctggtggcagtcagagaatggtgtggagcacgtcagcatc
cgcctggacctggagggcgagttccacttcacccaccttatcatgaaatttaaaaccttc
cgtcccgcggccatgctggtggagcgctcagctgactttgggcgcacctggaaggtgtat
cgctactttgcccacaactgctccaagctcttccctggaatccccaaccacccatcaggg
ctcgtggatgaggtgctgtgcgaccagcgctactctgagatcgagccctccagccatggg
gaggtcatcttcaaggtgctggacccctccatccccatagcagatccctacagcccagac
atccaggacctgttgcgtgtcaccaacctacgggtgaacctcaccaagctgcacacgctg
ggggacaacctgctggactcacggcaggaggtgctgcacaagtactactatgctgtggat
gaactggtgctgcgcgggagctgcttctgccacggccatgccgcccactgtgccccggca
ccgggtgccccaacaccctctgtccctggcatgatccacgggcgctgtgtctgcgaacac
cacacgcaggggctgaactgtgagcgctgcgaggacttctaccaagacctgccctggcgc
ccagctgagggctccagcaccaacgcctgtcgccgctgtgactgcaatgagcactcgcgg
cggtgccactttgacatggctgtgttcctggccacggggaacaccagtggggctgtgtgt
gatggctgccagcacaacaccatgggccgtcactgccacctctgcaagcccttctactac
cggcaccctcgctccgacatccggtcccccactgcctgtgccccgtgcgattgtgacccg
gcaggctcgctggatggaggtgcctgcgatgggcatacggacgtggcgctgggcatgatt
gcggggcagtgccgctgcaaggagaatgtgtccggtccccgctgtgaccgctgccagcac
ggcgcctatggcctcagccagggcgacccacagggctgccagccatgcaggtgtgaccca
cggggtacagtggcgggcagctccccgtgtgaccccatcagtggggactgctactgcaaa
cgcttcgtggctgggcgctcctgcagccagtgtgtgcccgagttctggggtctgagctac
gacttggggggctgccggccctgcgcctgcgacttcgggggagcctacaacaaccggtgc
tccatggaggatggggcatgtccctgccgtccccacatcatggggcggcagtgtgaccag
gtacaacccggcttcttctgtgccccccttgactactacacctatgaggccgagcaggcc
accggccatggccacagccacccccagctcccgggtgccattcgggaagaggtgccccag
gactgcctggagtatgacaccagggagccgggggggcggaagggacactcacggcatcag
cgcagccccccccgtgccccccagtcccctgtccccttgcgccgcagccgccagcagccc
cccaagctggatgtggaggaggtggtgcgggacagtgccgggcgcatggtgacgtggacg
ggcttggggttcgcccgggtgcgggacggggctggcctgaccttccacgtggacaatgtg
ccctaccccatggactacgagctgctgctgcgctacgagcctgagtcagccgaggactgg
gaggccgtggtcagtgtcagctcccgggtgctgcccaccagctctcgctgtgggaacctg
ttgccctccgagcagatgtaccgcgagagtctgccccacagccagaggtatgtgctgctg
tcccggcccttctgctttgagcccagcaccccttacgaggtgaccatgcggcttcagcgg
gccggtgtcacccagcgccaccctggtgccttcatcctcatcgactcgttggtgctcctg
ccgcgagtgtcagagttgccaggcttccatggggcagaggcagcagcgcgccaggaggag
ctggagcggtaccagtgcctggaggtgtttcgcatggccccccctcatcccctggcccag
gcctgtgcccgcctggtctgcagcgtctcagccctgatgcacggcggggcactgccctgc
cagtgcgacccacagggctcccgcagcagcgagtgccaggtacagggcgggcagtgcgag
tgcaagccccacgttgtcggccgacgctgcgaccgctgtgccccaggcagctacggcttc
gggcccctgggatgcagcccatgcacctgctccccagagggctcagtgtcccagctgtgc
gacgaggtgagcgggcagtgccggtgccagcctggcacggtgggccggcagtgtgaccag
tgccagcccgggcactggggcttccctgcctgccggccctgccagtgcaatgggcacgcc
gaggagtgcgacccccggacgggcacctgcctgcgctgccgtgaccacacggatggacgg
cactgtgagaggtgccaggacggttactatgggaaccctgtgctgggctcagggcagcag
tgccggccctgcccctgccccggctaccctggcacacggcattaccatgggagcgcctgc
catgctgacgaggagacccaccacatcgtctgcctctgcgcccctggatacgcggggccc
cgctgtgaccgctgctcccctggttactttggggctccggagatggaggggggtgtgtgc
cggccctgccagtgcaacaacaacatcgacgccagcgacccggagggctgcgacccccgc
acggggcagtgcctgcgctgcctgtaccacactgccgggccacactgtgcccagtgtcag
cctggctactatggcaatgccttgcagcgcagctgccggcgctgtggctgtgacccacgg
ggtacactggcctctcactgcaccaatggcacctgctcttgtgaccgtggcacaggagcc
tgtgcctgccggcccaatgtcgtgggcaagagctgtgatcgctgcgcaccccacttctgg
agcctgggggggccaaggggctgtgagccctgtggctgccaccccacacatgccctgcac
cctgcctgtgacacagtgacagggcagtgccagtgccggcctggcttcgggggccgtgtc
tgttcccagtgccaggagcaccactggggagaccctgagcaggagtgccgagcctgtgag
tgtgagccgctgggtgctgagagcccacagtgcgagcaggacaacgggcagtgccggtgc
cggctgggattcggggggctacgctgtgaccgctgccagaggggctaccaggagcccttc
ccccactgctcaccctgccacccttgctttgggcactgggacctggtcgtgggcagcctg
cgggacaggctgcagcgccttggggcacaggtgcaggcactgagggagggagggtctgca
ctcccactcagcccccgtcgcctgcgggagctggaggaggctctggggcacgtggaacag
ctgctgggagagggggacagccctggtggtcccctcctcgatggactgcccaggcagctg
ggtggcaccaggatggagctggacaacttctggaagcacctccaagagttggagcaacat
ctagacctgctggcacaggcggatatgcagcaccatgaccggctagctgagctgagccgc
gagctgggaggcctcaaccgaaccacttcccaccttcaaatcctccttggcactatagtg
gcagctggattcagcgagtcttaccgcagcatcctggcatcggtggaggcctcgcggcag
gcggaggtggtggccaatggcacagctggcgagctaagtagggcacagatgacgcggcgg
gcgactgagcgggtgctgcggcagcggggcgatactttccgccgtggcacagccgcagct
cggaaatccttgcgggaggcacaaaaacgggtgatgggactcaacattgccaggatcaat
gagaagatttgtggggcacctggagaccagagctgcaagcacgcgtcttgcggaggagcc
ttgtgccgggacagtgcagggacaaggcgttgcggtggcattgggtgtgcaggggcactg
cctatctcagctcgagccctgagcagtgcccataatgcctcgcagcagctggaggaggca
ttagggcagctggctgttgtggcacagaagatgcaggaggtgcaggagctggcacagggg
gctcggagctgggcagaggaggcactggggcgctctcaggctgcccgcagccatgcagag
aaggcgacagcccagctgcgggatttcatccgccgaatcaaggccttcctggcagaggag
ggagctgacccgggcagcattgagctggtggcccggcaggtgctgaacatttccctgccc
agcagccccagacagatccaggagctgctgcgggagatgcgggagagcattggccagcta
cagggggtggacgccgttctcaacagcacagcagaggggctggctgtggcacgggatctg
ctggcacaggggcaggaggccaggcaacgagcagaaggcataagggatgagctggcaggg
acacagcaggcactggaggtggcgcggacacaggcgatgacagcagggagcaccctgcgg
agcgccagggatgccatccgggtggctgagaacagagccagggaggcggagcgcaggctg
caggtgctggacaggaaggagtcacaggcacagaggcggctgcaggaactggcacggcac
atcaccgccctgcaggagcatggccgggatgctcaccacatggcccagcaagccaaggag
ggggcacagcgtgccaccacaacctcggggacacttagccaggacctggcacaggtaacg
cagcgttatgtggtgctgaagaaccaagtgggcatgctggacagggtgtctggtggggcc
ctgcagcgtgtgtcacagctgacggcagaggcccaagacctcctggataaggccagcaac
agtaagaggaaactggaagacctggagcagcgctttggggccaatgaacgggcgatggcg
gaaaaggtgacacgactgcaggctttggagcagcaggtcaccgggctgttgcaggagatc
cgggagagggccaacgcttacgccacctgctag
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