Aphelocoma coerulescens (scrub jay): 138117729
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Entry
138117729 CDS
T10543
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138117729 (TRAIP)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138117729 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
EXOC6_Sec15_N
zf-C3HC4_4
RINGv
zf-RING_Vps41
zf-RING_16
RING_XB3-XBAT31
zf_RING_Vps8
Zn_ribbon_8
Filament
zf-RING-like
WEMBL
Prok-RING_4
Crescentin
FANCL_C
zf_RING_Vps8_fungal
Laminin_II
MAD
zf-Nse
DUF5305
DUF1664
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
138117729
NCBI-ProteinID:
XP_068884380
LinkDB
All DBs
Position
12:complement(4229992..4250220)
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AA seq
507 aa
AA seq
DB search
MPIRAHCTICSDFFDNERDVAAVPCGHTFHQACLIQWFDTAPSRTCPQCRSQVSKRHIIN
KLFFDVTLEEQAAPDAETLQNELDKVKAQLSLKEKEKRECQAVVDGLRDTLDVRNATIES
LQKVVGETEMLCSSLKKQMKFLEQQQEDNRSSKEEARRLRNKLRTMERIELLLQSQRPEV
EEMIKEMGVGQAAVEQLAIYCVSLKKEYENLKEARKISGEMTEKLKKELFSVNNKLQKAT
SELEKTKEELKSTQKDLKNADKEILSLKKKIDILQDTLKVPSVTRETLSRLVFESPVPVE
LQHPKLHRPSHSDEINLDATYDVDTPEHQPCTSSFGTTKRQKLDKKLPPVVNLAKKILKE
TVENRADDLEDDALKGLLPAYIRNSVLSKKPSLGSLWGPHKNMGSVRTGYDGMGGRTKFI
EPTNLAEIRPLSVRSKKKVSRPASAAPSASSSGSSQSSAVAAALGSLAPGGTALLGSSHK
QEVQDECLGCQSESSREKGPGPAPCLV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgcgcccactgcaccatctgctccgacttcttcgacaacgagcgggacgtg
gcggccgtgccgtgcgggcacaccttccaccaggcctgcctcatccagtggtttgacact
gcaccgagccggacatgcccgcagtgcagaagccaggtcagcaaaagacacatcatcaat
aagctgttttttgatgttaccctggaggagcaagcagcaccggatgctgagaccttgcag
aatgaactggacaaggtgaaggcccagctctccttgaaagagaaagaaaagagggaatgc
caggctgttgtggacgggctgagggacactctggatgtgcgcaatgccacaatagagtcg
ctccagaaggtggtgggagagacagagatgctgtgctcctctctcaagaagcagatgaaa
ttcctggagcagcagcaggaggataacagaagttcaaaggaggaggcccgtcggctgcga
aacaagctgagaaccatggagcggattgagctgttgcttcagagccagcgcccggaagtg
gaggagatgatcaaagagatgggagttggacaggcagcggtggagcagcttgcaatctac
tgtgtctccctcaaaaaggaatacgagaacttgaaggaggctcggaagatctctggtgag
atgacagagaagctgaagaaggagctgttttctgtcaataacaagctgcagaaagcaact
tcagagttggagaagacaaaggaggagttaaaaagcacacagaaagatctgaagaatgca
gacaaggagatcttgagtttgaagaagaagatagacatcctgcaggatactctgaaggtc
ccctctgtaaccagggaaacactcagtcggctagtctttgaaagccctgttcctgtggaa
ctgcagcatccgaagctccaccgcccgtcccacagcgatgagatcaatctcgatgctact
tatgatgtggacacccctgaacaccagccctgcacatcctcctttggcactacaaaaagg
cagaagctggataaaaagctgcctcctgtggtaaatctggcgaagaaaattctgaaggaa
acagtggagaacagggcagatgatctggaggatgatgctcttaaaggactcttgccagca
tacatcaggaactctgttctctccaagaagccatctttgggcagtttgtggggtccccac
aagaacatgggctctgtgaggacgggctacgatggcatgggaggcaggacaaagttcata
gagccaacaaacttggcagaaatccgtccattatcagtgaggagcaagaagaaagtctcc
agaccagcgtctgcagctccttctgcatcttcttccggcagcagccagagctctgcagtt
gctgctgctttgggctctctggcaccaggtggaactgcacttcttggaagcagccacaag
caggaggtgcaggacgagtgtctgggatgtcagtctgagagcagcagggagaagggacct
ggaccagctccatgcctggtgtaa
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