Aphelocoma coerulescens (scrub jay): 138117919
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Entry
138117919 CDS
T10543
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
138117919 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138117919 (IRF1)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
138117919 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
DUF684
Motif
Other DBs
NCBI-GeneID:
138117919
NCBI-ProteinID:
XP_068884683
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All DBs
Position
13:complement(11257819..11264665)
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AA seq
325 aa
AA seq
DB search
MLSTEANMPASRMRMRPWLEMQIDSNQIPGLIWINKDKRIFQIPWKHAAKHGWDMEKDAC
LFRSWAIHTGRYKEGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINRGSSAVRVYRMLP
PLTKHQKKERKSKSSREVRNRSKRKCYEETRLEESAESLTNTPLQDDHSGYTIHDYAEQE
VEVESTAITLDLSSCEVSGSLTDWRPAMEVTMADSTNDLYQLQVSPLASSSEVTDEDEEE
INPDIFKLLGPAQDWHNTSIGGKGFLTNESGTQTLCSTYGYKEQDGDINTTSGEVDLRFF
DQKSSLDFSWLDTVRPTMQVIPCGL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcacagaagccaacatgccagcctcaagaatgcgcatgaggccatggttggaa
atgcagattgattccaatcaaataccaggactgatatggattaacaaggataagaggata
tttcaaattccatggaaacatgcagctaagcacggctgggacatggagaaggatgcctgc
cttttccggagctgggccattcatacaggaaggtataaagaaggtgagaaagatcctgat
ccaaaaacctggaaggcaaatttccgctgtgccatgaattccctgcctgacattgaagaa
gtgaaggataaaagcatcaacaggggctccagtgctgtcagggtttacaggatgctgcca
cccttgacaaagcatcagaagaaagaaaggaagtcaaagtcttcaagagaagtaagaaac
aggagcaagagaaagtgttatgaagagacaaggctggaagagtcagcagaaagcttaacc
aacactcctttgcaagatgaccacagtggctacaccattcacgactatgctgagcaggaa
gtggaggtggagagcacagccatcaccttagacctgtcctcctgcgaggtgagcggctcc
ctgaccgattggaggccagcaatggaagtcaccatggctgacagcaccaacgacctctac
cagctccaggtgtctcctctggcttcatcctctgaagtcacagatgaagatgaagaggaa
ataaatccggatatttttaagctgcttggaccagcccaagactggcacaacaccagcatt
ggggggaaaggctttctcaccaatgagtcaggcacccagaccctttgcagcacctacggc
tacaaggagcaggacggggacatcaacacgacttcaggagaggtggatttgaggttcttt
gaccagaaaagcagcctagacttctcctggctggatacagtgaggccaaccatgcaagtc
attccctgtgggttgtaa
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integrated database retrieval system
