Aphelocoma coerulescens (scrub jay): 138117951
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Entry
138117951 CDS
T10543
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138117951 (GEMIN5)
03041 Spliceosome [BR:
acoe03041
]
138117951 (GEMIN5)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138117951 (GEMIN5)
mRNA cycle factors
P-body specific factors
138117951 (GEMIN5)
Spliceosome [BR:
acoe03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
138117951 (GEMIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_Nup120_160
WD40_RFWD3
WD_LRWD1
TPR_IF140-IFT172
Tricorn_2nd
Beta-prop_IP5PC_F
Lgl_C
Motif
Other DBs
NCBI-GeneID:
138117951
NCBI-ProteinID:
XP_068884743
LinkDB
All DBs
Position
13:5467239..5484347
Genome browser
AA seq
1536 aa
AA seq
DB search
MAAGTGTGMGVRALPASPNWYSSRCSDASSDGRLFGFAARHRVCLLDVAAAAPAFYGELI
GHTDRISGFAFCPCPGQSSLCASSSDDGSVKVWDTGTLSPVLEYSLHQNSISALHWSPLV
KDLIVSGDEKGVIVCYWHNRSDSQQFFPEPRTVFCLTCSPHHENLVAIGYKDGMVVVIDI
SRKREVVHRLRGHEDEIHCLAWCPVPGEERLSAWQDELQAPSEEGKVPNGELTQDTATKK
GCYLASGSKDQTIRIWSCTRGRSVMTLKLPPTKRRGGAVDPAVKERIWLTVHWPAGHPTE
IVSSGFGGELLLWNLTQPGKRKWTLLGSSEGQNHSRIVFNLSSVKHQDKELLFSISMDRD
VKCWDLSTLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWNTLSMNNIYDVKT
FWQSIKSKVTALSWHPTKEGSLAFGTDDGKVGIFDTLSSSAKNKPPQISSTYHKKTVYTL
AWGPPTPPLTSGEESEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKL
PARTEISWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHEHGTQPEL
SYLIASGSINATIYVHNLKSVVENSLESPLTITEPFRTLAGHTAKITSLSWSPHHEGRLV
SACYDGTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDSDCVYTGADDFSVHKWHISKQE
HTRPPQGKKSVELEKKRSMQPKVKAKKKKKPTGKSPGKQDANDAMNGDDSMKEILLEENG
VSDHEGEKEAQEAELADKVSVTVSRDTSSSACDYSSFSSPKPFVTQKAAPVKKDPPKEKP
APDASLKKKKPRSILPFSTLMDHRSKDELHQDCLKLAACLKTKDNNEDVSPDLKDCIHLG
LFTDRDSLHKMIDMEGKHHLENGHAELFQQLMLWKGDLKGVLQAAAERGELTDQLVAMSP
MAGYQAWVWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNSFYREAIVMAKAR
LRPEDPILKDLYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKGDVTSLKTAAEL
ALISGEEELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQSLVFCLNELLCRCLSER
NPCERKSPVPPCYHNWELNREASFFDMVAEVWQNVLGMDTTERATCAQEQLCRIEHPPST
SNTHPKQVLFHISHDLALAALSCHLGTWDEAVKNILGAVTRSFDAGNFTLMQEICSIILP
EGCDDLRHKLDSTNSQSMDACRSLEGFVAYRLLYDLWWNPPKDCLGLQKAVLGPVLCPSE
QTAPEKSCVSGDPSPEETVQTAAEMGENLCSTTDIHKCETQSDSGTDSTDVVDRQSKLKG
CQVLLSEEMAALQNTQRDIAEVQETLAEMIRQHQQQRDNLQENTNGNTQGSNLEQSSETE
SDKPCSDSNQMNCKDEVKQPITLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLL
HLGSQCPSELQEEALALLRKHGSAGIYKRAGRSFLT
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggaccgggacggggatgggggtgcgggcgctgcccgcctcccccaactgg
tacagcagccgctgcagcgacgccagcagcgacggccgcctcttcggcttcgcggcgagg
caccgcgtctgccttctggatgtcgccgccgccgcgcccgcgttttacggggagctcatc
gggcacacggacaggatctccgggttcgccttttgcccctgccccgggcagagcagcctg
tgcgccagcagctccgacgacggaagcgtcaaagtgtgggacaccgggacgctgtcgccg
gtgctggagtacagcctgcaccagaactcaatctcggcgctgcattggtcacctcttgtg
aaagatctgattgtgtctggtgatgagaaaggtgtcattgtttgttactggcacaacaga
agtgacagccagcagttcttcccagagcctcggacagttttctgcctcacctgttctcct
catcatgaaaacctggtggccattggctacaaggatggcatggtggttgtaattgatatc
agcaggaagagagaagttgtgcaccggctgagaggccacgaggatgaaatacattgcctg
gcctggtgccctgtgcctggggaagaaaggttatctgcttggcaggatgagctccaggct
ccttcagaggaaggcaaggttccaaatggggagctgacacaggacacagccacgaagaaa
ggttgttacctggcctctggaagcaaggatcaaaccatacgaatatggagctgtaccaga
ggcaggagtgtgatgactctgaagctgccacccaccaagaggagaggtggagccgtggat
ccggcggtcaaggagcgcatttggctgactgtgcactggcctgctggccatcccactgag
attgtgtccagtggctttggaggagaactgctcctgtggaatttgacccagcctggcaaa
cgcaagtggactcttttgggatcttcagaaggacaaaaccactcccgaattgtgttcaat
ctcagttctgtgaaacaccaagacaaagagctccttttttccatttcaatggacagagat
gtgaaatgctgggatctatcaactctggattgcagctggaccatgccctcccttggagga
tttgtctacagccttgccttctcccctgtggacacaggctgtcttgccattggggttgga
gacagcatgatccgtgtgtggaatactttgtccatgaacaatatttatgatgttaaaacc
ttctggcaaagcataaagtccaaggttacagcattatcctggcatccaactaaggaaggc
tccttggcttttggaacagatgatggaaaagttggcatatttgacaccttgtccagcagt
gctaagaataagccacctcagatctccagtacttaccacaagaagactgtgtacacatta
gcctgggggcctccaactcctcctctgacttcaggagaagaaagtgaacagccctctgta
actttatacagttgtgctggagaaggaattgtttttcaacacaatccctggaagcttaat
ggagaagcaaatgacatcaacaaagtcatccgagacaccaattcaatcaaacacaagctg
cctgcacgtacagagatcagctggaaaccagatggcaaactcctggctcttggcaatgag
gatggctcaattgaaatatttcaggcaccaaacttgaagctgctctgcactatccagcag
catcacaagctgatcaatgccattcgttggcaccatgagcacgggacccagccagagctg
agttacctgatagcttcaggctccatcaatgccaccatttatgtgcataatctgaagagt
gttgtagagaactctttagaaagtcctttaacaataacggagccttttcgaactctggct
gggcacacagctaaaatcacaagtctttcttggagcccccaccatgagggaagattggtg
tctgcttgctatgatggcactgcacaggtgtgggatgtgatgaaggaagagccactctgc
aactaccgagggcaccagggccgcctgctgagtgtccagtggtcaccagtggattcagat
tgtgtttatacaggagcagatgatttttctgttcacaagtggcacatctccaagcaggaa
catacacggcctcctcagggcaaaaagagtgtagaattagagaagaaaagaagtatgcag
ccaaaagtcaaagccaagaagaagaaaaagccaacaggcaagagtccaggcaagcaggat
gcaaatgatgccatgaatggagatgacagcatgaaggaaatattgctggaggaaaatgga
gtgtcagaccatgaaggagaaaaagaagctcaggaggcagagttggctgataaagtctct
gtgactgtgtccagggatacatcttcatctgcatgtgattattcttcattcagctcacca
aagccttttgtgacccagaaagctgctcctgtgaaaaaggatccacctaaagagaagcca
gctcctgatgcctctctgaagaagaagaagcctcgttctattctgcccttcagcacatta
atggatcacagatcaaaagatgaattgcatcaggactgcttgaagctggctgcatgtctg
aaaactaaagataataatgaagatgtgtcccctgacctcaaggattgcatccacttgggg
ctgttcacagacagggattctctgcacaagatgattgatatggaaggaaagcaccacttg
gagaatgggcacgcagagctcttccagcagctcatgctatggaaaggagacttgaagggt
gttctccaggcagctgctgagaggggggagctgacagaccagctcgtagccatgtcaccc
atggctggataccaggcctgggtttggacagtggaagcctttgccaagcagctgtgtttc
caggagcaatacgtgaaggctgcctcccatctcctgtccatccataaagtctatgaggct
attgaactcctgaaagtgaacagtttttacagggaagcgattgtaatggctaaggccagg
ctgcgtccagaagatccaattctgaaggatctctacaccagctgggcagctctgctagag
aaagatggtcattattccatggctgccaaatgttatctgggggcttcctcaccctatgat
gcggttaaagtgttgtcaaaaaagggggatgtgacatcccttaaaactgctgctgagctt
gctctgatatctggggaggaggagttgtcagcaactttgtctttgagatgtgcccaagac
ctgctgttatccaggaactgggtgggagctcaggaagtccttcagcaacataaaacttta
tttggacaaagccttgttttctgcctgaacgaactgctctgcaggtgcctcagtgaaagg
aatccctgtgagcgaaagagccccgtgcccccctgttaccacaactgggagctgaacaga
gaggcctcgttttttgacatggtggcagaagtgtggcagaatgtgctgggcatggacacc
actgaacgagccacatgtgcacaggagcagctgtgcaggattgagcatcctccttcaacc
agcaacacacacccaaagcaggtgcttttccatatctcccatgacctggcccttgcagcc
ctgagctgtcacttgggtacatgggatgaggcagtgaaaaatattcttggagctgtgacc
cgcagttttgatgctgggaatttcactctgatgcaggagatttgcagtatcatccttcct
gagggctgtgatgacctgagacacaaactggacagcacaaattctcagagcatggatgcc
tgcaggagtttggagggcttcgtggcttacagactgctctatgacctgtggtggaaccca
cccaaagactgccttggcctgcagaaggctgtgttgggtcctgtgctgtgtcccagtgag
cagacagctcctgagaagagttgtgtttcaggtgacccatcccctgaggaaacggttcaa
actgcagctgagatgggtgaaaacctctgcagtacaactgacattcataagtgtgagaca
caaagtgactcaggaactgactcgactgatgtggtagacagacagtcaaaactgaaaggt
tgccaagtgctcctttcagaagagatggctgccttgcagaacacccagagagacatagct
gaggtccaggagactttagcagaaatgatccggcagcatcagcagcagagggacaatctc
caggaaaacacaaatggaaacacgcagggaagcaacctggaacagagttcagagactgaa
tcagacaaaccatgctctgacagcaaccagatgaattgcaaagatgaagtaaagcaaccg
attacactccctgagctcacaaagcagcttctgaaagcaaagcagaaattagctgaattc
ccagacaatttaaaggtcttccccttccctgacgtgctggagtgctgccttgtactcctt
caccttggatcccagtgtccttctgagctgcaggaagaggctctcgctctccttaggaaa
cacggtagtgctgggatttacaaaagggctggcaggagcttcttgacatga
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integrated database retrieval system
