KEGG   Aphelocoma coerulescens (scrub jay): 138117991
Entry
138117991         CDS       T10543                                 
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138117991 (DDX46)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acoe03041]
    138117991 (DDX46)
Enzymes [BR:acoe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     138117991 (DDX46)
Spliceosome [BR:acoe03041]
 Complex A
  U2 snRNP components
   U2 related factors
    138117991 (DDX46)
 Complex B
    138117991 (DDX46)
SSDB
Motif
Pfam: DEAD Helicase_C KH_12 KH-I_KHDC4-BBP CdAMP_rec
Other DBs
NCBI-GeneID: 138117991
NCBI-ProteinID: XP_068884808
LinkDB
Position
13:complement(9729169..9749019)
AA seq 1043 aa
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRKREDRRSRSRDRDRRRERSRSRDKRRSRS
RDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEK
TEGVEVSKEKKKDKDDKEEEKDKDATTNAVATENFDQNKLEEEMRKRKERVEKWREEQRK
KAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVK
EEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSS
EEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLE
LEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIA
KTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRV
VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFD
MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQH
VIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQY
DRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNK
GYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGK
GFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTS
NAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVMVPFHFKDVMQQATNAILRGGTIQA
PTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWK
VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL
IKEELIRLQNSYQPTNKGRYKVL
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgggccgcgagtccaggcattatcggaagcgctctgcatcccgggggcgctccgggagc
cgttccaggagtcgctccccatcggacaagaggaaacgtgaggacaggcgctccaggagc
agggatcgggatcgaagacgggagaggtcgcgcagcagggacaagagaaggtctcgctca
cgggacagaaagcgtcaaagacgttcaaggagtagagaaagggaacggagccgagagaga
agacgatcccggagccgagagaggaggcgctcaaggagcaggagtagagggagacggtct
cgatcctccagtccaagcaagaataggaaaacagaaaacagatcaagatctaaagaaaag
acagaaggtgtggaagtttccaaagaaaagaaaaaagacaaagacgacaaagaagaagag
aaggataaagatgctaccacaaatgctgtggctactgagaattttgatcagaacaagcta
gaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagaacaacgcaag
aaggcaatggaaaacataggagagctaaaaaaagaaattgaagagatgaaacaggggaaa
aaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaagaa
ggcaatgaggttgaagatgaggagttagatcctttagatgcttatatggaagaagtaaaa
gaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaaaagaaa
actggaccaactgttaccaaggtggtaaccgtggtgacaaccaaaaaggcagctgctgag
tcagaaaagaagaaaggggagctcatggagaatgaccaagatgcaatggagtattcctca
gaagaggaggaagttgatcttcagactgccctgactggctatcagaccaagcagagaaag
ctgctagaaccagtggatcatggaaagatagaatatgaacctttcaggaaaaacttctat
gttgaagtaccagaactagctaaaatgactcaagaagaggtaaatgtgtacaggttggag
ctggaaggaattacagtcaagggaaaaggctgtcccaaaccaataaaaacctgggtacaa
tgtggtatttccatgaagattctcactgccctcaaaaaacatggatatgaaaagcccact
cccattcagacccaggctattccagcaattatgaatggacgggatttgattggcattgct
aaaacaggaagtggaaagactattgcatttcttttgcccatgttcagacacattatggat
cagagagcattagaagaaggagaaggtcccatagctgtcattatgacacctacacgtgag
ttggctttgcagattaccaaggagtgcaagaaattctcaaagacacttggacttcgagtt
gtctgtgtttatggaggaacaggaatcagtgaacagatagctgaactcaaaagaggtgct
gaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgg
gtgacaaatctccgtagagtcacgtacgttgtacttgatgaagctgacagaatgtttgac
atggggtttgagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgtcagact
gtcatgttctctgctacttttcccagagctatggaggccctggctcgcaggatcctcagt
aaacctatagaagtgcaagttggaggcagaagtgttgtctgttctgatgtggagcaacat
gtgattgtcatagaagaggagaacaagtttctgaagttactggagctactgggacactat
caggagaaaggatctgttattatatttgtagataaacaagaacacgccgatgggttgttg
aaagatttaatgagggcctcttatccttgcttgtctcttcatggaggtattgatcagtat
gacagggacagcattattaatgacttcaagaatggaacctgcaaacttctggtggccacg
tctgtagcagcaaggggcttggatgtgaagcagctgatgctggtggtcaattacagctgt
cccaaccactatgaggactatgtgcaccgagcaggccgcactgggcgagctggcaataaa
gggtatgcatatacattcattactgaggatcaggcacgttatgctggtgatatcattaag
gctttggaattgtctgggaatccaattcctactgatttggagaagctctgggctgacttc
aaagaccaacagaaggctgagggaaagttgattaagaaaagcagtggattctctggcaaa
ggttttaagtttgatgaaacagaacaggctttggctaatgaaagaaagaagctacaaaaa
gcagctcttggcttgcaagattcagatgatgaagatacagctgttgatattgatgaacaa
attgaaagcatgttcaattcaaagaaaagagtaaaagacatggcagcaccaggaacatca
aatgctcctacaccatcagctgggaatgcagaaaaattggaaattgctaaaagattggct
ttgagaatcaatgcccagaagaatcttggagcagaggcacaagtcatggtccccttccac
tttaaggatgtgatgcagcaggctacaaatgctatcctgagaggaggcacaattcaggct
cctactgtgtctgccaagaccattgcagagcaactggctgaaaaaatcaatgccaagctc
aattatgtacccatagagaagcaggaggaagagaaacaggatggagggcagaatgaatcc
tttaagagatatgaagaagaattagagatcaatgacttcccacagactgccagatggaaa
gttacctccaaagaagcactgcagagaatcagtgaatattctgaagctgccattacaatc
aggggaacttacttccctccaggcaaagaacccaaagaaggagaaagaaagatttatttg
gctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcacacgactt
ataaaagaggagcttatcagattgcaaaattcttaccaaccaaccaacaaaggaagatac
aaagttttatga

DBGET integrated database retrieval system