Aphelocoma coerulescens (scrub jay): 138118170
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Entry
138118170 CDS
T10543
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138118170 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138118170 (RBM22)
Spliceosome [BR:
acoe03041
]
Complex B
Other components
Prp19-related factors
138118170 (RBM22)
Complex C
138118170 (RBM22)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
138118170
NCBI-ProteinID:
XP_068885112
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All DBs
Position
13:6692813..6700460
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AA seq
420 aa
AA seq
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MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPSAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcgctgggctccaacacctacaaccggcagaactgggaggacgcggacttc
cctatcctgtgccagacatgtcttggagaaaatccctatattcggatgaccaaagaaaaa
tatgggaaagaatgcaagatttgtgccaggcctttcacagtgttccgctggtgccccggg
gtgcggatgcgcttcaagaagacagaagtgtgccagacctgcagcaagctgaagaacgtc
tgtcagacctgcctgctggacctggaatatggtttgcctatccaagtccgggatgcagga
ctctcccttaaagatgaaatgcctaaatctgatgtgaacaaagaatactacacccagaac
atggagcgagagatagccaattctgatggcactagaccagttggtgcactaggaaaagct
acttctaccagtgacatgctgctgaagctggcccgaaccactccgtactacaaacgcaac
cgtcctcacatctgttccttctgggtaaaaggagagtgcaagagaggagaggagtgtccc
tacagacatgagaaacctacagatccagacgatcctctggctgaccagaacatcaaagat
cgttactatggaattaatgatcctgtggctgacaaacttctgaaacgagcatcaaccatg
cctcgtctagatcctcctgaagacaagactattactacactgtatgttggagggcttgga
gataccatcactgaatcagatctcagaaatcacttctaccagtttggggagatccggaca
ataacggtggtgcagaggcagcaatgtgctttcatccagtttgccaccagacaggctgca
gaggtggctgctgagaaatccttcaacaaactcatcgtcaacggccgcaggctcaacgtc
aaatggggaaggtcccaggcagcaagaggaaaagaaaaggacaaggaaggcactacagaa
tccgggataaagctggagccagttccagggcttcctggagccctcccccctcctccagct
gcagaagaggaggcttctgcaaattacttcaatctacctccaagtggtccttctgccgtg
gtgaacattgccctgccacctcctcctggcatcgctccaccaccgcctccaggtttcgga
ccacacatgttccacgccatgggacccccgcctcccttcatgagagccccaggccccatc
cactatccatcccaggatccccagaggatgggtgcccacgcaggaaagcacagcagcccc
tag
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