KEGG   Aphelocoma coerulescens (scrub jay): 138118170
Entry
138118170         CDS       T10543                                 
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138118170 (RBM22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acoe03041]
    138118170 (RBM22)
Spliceosome [BR:acoe03041]
 Complex B
  Other components
   Prp19-related factors
    138118170 (RBM22)
 Complex C
    138118170 (RBM22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12 RRM_PARP14_3
Other DBs
NCBI-GeneID: 138118170
NCBI-ProteinID: XP_068885112
LinkDB
Position
13:6692813..6700460
AA seq 420 aa
MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPSAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtccacatcgctgggctccaacacctacaaccggcagaactgggaggacgcggacttc
cctatcctgtgccagacatgtcttggagaaaatccctatattcggatgaccaaagaaaaa
tatgggaaagaatgcaagatttgtgccaggcctttcacagtgttccgctggtgccccggg
gtgcggatgcgcttcaagaagacagaagtgtgccagacctgcagcaagctgaagaacgtc
tgtcagacctgcctgctggacctggaatatggtttgcctatccaagtccgggatgcagga
ctctcccttaaagatgaaatgcctaaatctgatgtgaacaaagaatactacacccagaac
atggagcgagagatagccaattctgatggcactagaccagttggtgcactaggaaaagct
acttctaccagtgacatgctgctgaagctggcccgaaccactccgtactacaaacgcaac
cgtcctcacatctgttccttctgggtaaaaggagagtgcaagagaggagaggagtgtccc
tacagacatgagaaacctacagatccagacgatcctctggctgaccagaacatcaaagat
cgttactatggaattaatgatcctgtggctgacaaacttctgaaacgagcatcaaccatg
cctcgtctagatcctcctgaagacaagactattactacactgtatgttggagggcttgga
gataccatcactgaatcagatctcagaaatcacttctaccagtttggggagatccggaca
ataacggtggtgcagaggcagcaatgtgctttcatccagtttgccaccagacaggctgca
gaggtggctgctgagaaatccttcaacaaactcatcgtcaacggccgcaggctcaacgtc
aaatggggaaggtcccaggcagcaagaggaaaagaaaaggacaaggaaggcactacagaa
tccgggataaagctggagccagttccagggcttcctggagccctcccccctcctccagct
gcagaagaggaggcttctgcaaattacttcaatctacctccaagtggtccttctgccgtg
gtgaacattgccctgccacctcctcctggcatcgctccaccaccgcctccaggtttcgga
ccacacatgttccacgccatgggacccccgcctcccttcatgagagccccaggccccatc
cactatccatcccaggatccccagaggatgggtgcccacgcaggaaagcacagcagcccc
tag

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