Aphelocoma coerulescens (scrub jay): 138118187
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Entry
138118187 CDS
T10543
Symbol
PDLIM4
Name
(RefSeq) PDZ and LIM domain protein 4 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138118187 (PDLIM4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
138118187 (PDLIM4)
Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
138118187 (PDLIM4)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
BNR_2
Motif
Other DBs
NCBI-GeneID:
138118187
NCBI-ProteinID:
XP_068885131
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All DBs
Position
13:11121976..11164083
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AA seq
330 aa
AA seq
DB search
MSHSVVLHGPSPWGFRLVGGKDFSAPLTISRINPGSKAAMADLCPGDIILAINGENTDNM
THLEAQNKIKACVDLLLLSVNRAEGKTWSPPVLEDGKAQAYRINIEPDPQDSGRAQSRRS
IAHGSGGSPMDNKQMLNVQHHQPTQLHVNSSSESALPGQLSGLHITPAHSIDPVKSLSRN
RNGIDVESDVYKMLQDYEKPISEPKQSGSFRYLQGMLEAGENGEKLDKLSNPRNIKPPVP
KLGGPMSGLQMLPECTRCGNGIVGTIVKARDKLYHPECFMCDDCGLNLKQRGYFFIEEQL
YCETHAKERVKPPEGYDVVAVYPNAKVELV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattcggtggtcctgcatggcccttcgccgtggggttttcgtttggtgggcggt
aaggatttcagcgccccactgaccatctccaggattaaccctggcagtaaagcagccatg
gcagacctatgcccaggagacattattttggcaattaatggagagaacacggacaacatg
acacatctagaagcacaaaacaagatcaaagcgtgtgtggacctgctgctgctctctgtg
aacagagctgaagggaagacctggtcaccccctgtcctggaagatggcaaggctcaagcg
taccggatcaacatcgagccagaccctcaggacagtggccgtgcccagagcaggaggtca
attgcccatggatctgggggcagccccatggacaacaagcagatgctgaatgtgcagcat
caccaaccaacccagctccatgtgaacagcagctctgagtcagcacttccaggccagctg
agtggactccacatcactcctgcccacagcattgaccccgtgaagtctctatcacggaac
agaaatgggattgatgtggagtcagatgtctacaaaatgcttcaggattatgaaaagccc
atttcagagccaaagcagtctggatccttccgatacttacagggcatgttggaggccggt
gagaatggtgaaaaactcgacaaactgagcaacccccgaaacatcaagcccccggtgcca
aagcttggtggtcccatgtctgggctgcagatgcttcccgagtgcacccgctgtgggaat
gggattgtgggcaccatcgtcaaggctcgggacaaactctaccaccccgagtgcttcatg
tgcgacgactgtggcctcaacctgaagcagagagggtatttcttcattgaggagcagctg
tactgtgagacacacgccaaggagagggttaaaccccccgagggatatgacgtggtggct
gtttatccaaacgctaaagttgaactcgtctaa
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