Aphelocoma coerulescens (scrub jay): 138118208
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Entry
138118208 CDS
T10543
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04080
Neuroactive ligand-receptor interaction
acoe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138118208 (GABRA1)
04082 Neuroactive ligand signaling
138118208 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138118208 (GABRA1)
Ion channels [BR:
acoe04040
]
Ligand-gated channels
GABA-A
138118208 (GABRA1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
138118208
NCBI-ProteinID:
XP_068885161
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Position
13:12345323..12388084
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AA seq
455 aa
AA seq
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MKGFLVLCDCLWAWSLLLNALTERSYGQTSSQDELKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
LIKKNNTYTAAATSYTPNIARDPGLATIAKSATIEPKEVKPETKPAEPKKTFNSVSKIDR
LSRIAFPLLFGIFNLVYWATYLNREPQLKVQTPHQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagggattcctggtgctttgtgactgcctctgggcctggagccttctcctgaatgca
ctgactgaaagaagctacggacaaacctcatcacaagatgaacttaaagacaacaccaca
gtgttcaccagaatattggatcgtcttctggatggttacgacaaccgcttgagaccagga
ctgggagagcgtgtaactgaagtgaaaactgacatcttcgtcaccagttttgggcctgtt
tcagaccatgatatggaatacactatagatgtatttttccgccaaagctggaaagatgag
agattaaaattcaaaggacctatgacagttctccggttaaataatttaatggccagcaaa
atttggacacctgataccttttttcacaatggaaagaagtcagtggctcataacatgacg
atgccaaataaactattacgaattacagaggatgggacgttgctatacacaatgagattg
actgtgagagcagaatgtccaatgcatttagaagactttcctatggatgcacatgcttgc
cctttgaaatttggaagctatgcttataccagagcagaggttgtgtatgaatggacacgg
gaaccagcaaggtcagtggttgtggctgaagatggctctcgactaaaccagtatgatctg
cttggacaaactgtggactctggaattgtgcagtccagtacaggggaatatgttgttatg
actacacattttcatttgaagaggaagattggttactttgtcatccagacttatctgcca
tgcatcatgacagtgatactgtcacaggtgtccttctggcttaacagagaatctgttcca
gcaagaactgtatttggagtgacaactgtgctgacaatgactactctgagcatcagtgcg
aggaactcgctgcccaaggtggcctatgccacagccatggattggttcatagctgtatgc
tacgccttcgtcttctcagcacttatcgagtttgccacagtcaattatttcaccaagaga
gggtatgcgtgggatggcaaaagcgtcgttccagaaaagccaaagaaagtgaaggatcct
ctcatcaagaaaaacaacacatatacagctgcagctacaagctacacccctaatattgca
agggaccctgggctggcaaccattgctaaaagtgcaacaattgagcccaaagaagttaag
ccagaaacaaaacctgcagaacccaagaaaacttttaacagtgtcagtaaaattgatcgg
ctatcaagaatagccttcccattgctttttggaatctttaacttagtctattgggctacc
tatctaaaccgggagccccagctaaaagttcaaactccacatcaataa
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