Aphelocoma coerulescens (scrub jay): 138118254
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Entry
138118254 CDS
T10543
Symbol
GRIA1
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04080
Neuroactive ligand-receptor interaction
acoe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138118254 (GRIA1)
04082 Neuroactive ligand signaling
138118254 (GRIA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138118254 (GRIA1)
Ion channels [BR:
acoe04040
]
Ligand-gated channels
Glutamate (ionotropic)
138118254 (GRIA1)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
Motif
Other DBs
NCBI-GeneID:
138118254
NCBI-ProteinID:
XP_068885237
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Position
13:complement(5832716..6014080)
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AA seq
915 aa
AA seq
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MHKNARNKDHILPQRAAEWEQETSWCSITFQQKGSSRGLSGGLFPNQQSQEHAAFRFALS
QLTEPPKLLPQIDIVNISDSFEMTYTFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVC
FITPSFPVETSNQFVLQLRPELQDALISVIEHYSWQKFVYIYDADRGLSVLQKVLDTAAE
KNWQVTAVNILTTTEEGYRMLFQELEKKKERLVVVDCESERLNIILNKIIKLEKNGNGYH
YILANMGFMDIDLTKFRESGANVTGFQLVNYTDTVPARIMQQWRNNDAREHPRVDWKRPK
YTSALTYDGVRVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFE
GLSGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLVPIAVDTQSGNESTSLQNR
TYIVTTILEDPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGAR
DPDTKTWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG
VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGI
FNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI
ESAEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRV
RKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKL
SEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLNNVAGVFYILIGGLGLAMLVALIE
FCYKSRSESKRMKGFCLIPQQSINEAIRTSTLPRPAAAGGSGENGRVVSHDFPKSMQTIP
CMSHSTGMSLGATGL
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaaatgcaagaaacaaagatcacatcctgccccagagagctgctgaatgggag
caggagacatcctggtgctccatcacattccagcagaagggttcaagcagaggactcagt
ggggggttatttcctaatcagcagtcccaggaacatgcggcttttaggtttgcgttgtct
cagctcacggaaccccctaagctccttccccagatcgacattgtgaacatcagtgacagc
tttgaaatgacatacaccttctgctcacagttctccaagggcgtctatgccatctttggg
ttttatgagaggaggactgtcaacatgctcacgtctttctgcggggctctccacgtctgc
ttcataacgccgagcttccccgtcgaaacctccaaccagtttgtcctccagctccgccca
gagctccaggatgccctcatcagcgtcatcgagcactacagctggcagaagttcgtgtat
atttacgatgctgaccgggggttgtcagtcctgcagaaagtgctggacactgcagctgag
aagaactggcaggtgacagctgtcaacatcctgacaacaacagaggagggctaccgaatg
ctcttccaggagctggagaagaagaaagaaaggctggtggtggtggactgtgaatctgag
aggctgaacatcatccttaacaagatcatcaagcttgaaaaaaatgggaatgggtaccac
tacattctggcaaatatgggattcatggacattgacctgaccaaattcagggagagtgga
gccaatgtcactggcttccagttggtgaattacacagatactgttcctgccaggatcatg
caacagtggaggaataatgatgccagagagcatccacgtgtggactggaagaggccaaag
tacacgtcggccctcacgtacgacggggtgcgggtgatggccgaggccttccagaacctc
cggcggcagcgcatcgacatctcccgccgcggcaacgccggcgactgcctcgccaacccc
gccgtgccctggggacaaggcatcgacatccagagagccctgcagcaggtccgttttgaa
ggattgtctggcaacgttcagtttaacgagaaaggacgcaggaccaactacaccctccat
gtgattgagatgaaacacgatgggatcagaaagattggctattggaatgaagatgagaag
cttgtgccaatagccgtagatactcaaagtggcaacgagtctacgagcctccagaacagg
acctacatagtcacaacgatcctagaggacccgtatgtgatgctcaagaagaacgccaac
cagtttgagggcaacgagcggtacgaaggctactgcgtggagctggccgccgagatcgcc
aagcacgtgggctaccactaccggctggagatcgtccgcgacggcaagtacggagcccgg
gaccccgacaccaaaacctggaacggcatggtgggagaactcgtttatgggagggcggat
gtggccgtggcaccattaaccatcaccctggttcgagaagaagtgatagacttttccaaa
ccattcatgagtttaggtatatcaataatgataaaaaaacctcaaaagtccaaaccagga
gttttttcctttctggatcctttggcttacgagatatggatgtgcattgttttcgcctac
attggagtgagtgttgtcctcttcctggtgagccgcttcagcccttacgagtggcacact
gaggagttcgaggaaggacgggaccagccagccaatgaccagacaaatgagtttggaata
ttcaacagcctctggttctccctgggagctttcatgcagcaaggatgtgatatttctcca
aggtctctctctggccgcatagtcggtggcgtctggtggttcttcaccttgatcatcata
tcctcctacacagctaacctggctgccttcctcaccgtggagaggatggtgtctcccatc
gagagcgcagaggacttggccaagcagactgaaatcgcttatgggaccctggaagctggc
tccactaaagaattttttaggcgatccaaaatagcagtgtttgagaagatgtggacgtac
atgaagtcagccgagccctccgtttttgtgaggacgacagaagaggggatgatccgggtg
aggaagtcaaaagggaagtatgcatacctcttggagtccacaatgaacgagtacatcgag
cagcgcaagccctgcgacaccatgaaggtgggaggtaacttggactccaaaggctatggt
attgcaacgccaaaggggtctgcactgagaggtcccgtaaacctagcggttttgaaactc
agtgagcaaggcgtcttagacaagctgaaaagcaaatggtggtacgataaaggggaatgt
ggaagcaaggactccggaagtaaggacaagacgagcgcgctgagtctcaacaatgtggcg
ggggttttctatatcctcatcggtgggctcggacttgccatgctggttgccttaatcgag
ttttgttacaagtccagaagtgaatcaaagcggatgaagggtttttgtttaatcccacag
caatcaatcaatgaagccatacggacatcaacccttcccaggccggctgcagcaggaggc
agtggagaaaatggacgtgtggtcagccacgatttccccaaatccatgcagacgatccca
tgcatgagccacagcactggcatgtccctgggagctacgggattataa
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