Aphelocoma coerulescens (scrub jay): 138118314
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Entry
138118314 CDS
T10543
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138118314
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
acoe01007
]
138118314
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoe03016
]
138118314
Enzymes [BR:
acoe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
138118314
Amino acid related enzymes [BR:
acoe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
138118314
Transfer RNA biogenesis [BR:
acoe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
138118314
Prokaryotic type
138118314
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2d
HHH_3
Motif
Other DBs
NCBI-GeneID:
138118314
NCBI-ProteinID:
XP_068885328
LinkDB
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Position
13:complement(16729747..16735216)
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AA seq
509 aa
AA seq
DB search
MLRLGPIAAAVRRLPAGPRLGPLCLAGSRGSFARSWPPAGDRGPLSRQVRAAAGGERVRV
LKTPKGTRDHPPAQTALRERLLGAVVSCFKRHGAAAIDTPALELRETLMGKYGEDTKLIY
ELQDQGGELLALRYDLTVPFARYLAMNKVTNMKRYHVAKVYRRDNPATTRGRYREFYQCD
FDIAGQFDPMIPDAECLKIVHEILSDLQLGDFIIKVNDRRILNGVFAVCGVPESKFISAC
STVDKLDKVPWEEVRSEMVGEKGLSPEAADRIGEYVQLHGGLDLIERLLQDPKLSQNKLA
KEGLGDMKLLFEYLTLFGITEKISFDLSLARGLDYYTGVIFEAVLLHQENEHVEEAVSVG
SVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASGEKLRTTETQVLVAT
PQKHLLPARLKLISELWDAGIKAEMLYKKDPKLLKQLQYCEDTGIPLAAIVGEQELADGV
VKLRDVATREQVDIPREKLIDEIRRRLEP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggctcgggcccatcgccgccgccgtccgccggctaccggcggggccccgcctc
gggccgctgtgcctcgctgggagccggggcagcttcgcccggtcctggccgccggccggt
gaccgcggacccctgtcccggcaggtgcgggcggcggcgggcggcgagcgggtgcgggtg
ctgaagacgcccaagggcacccgcgaccacccaccggcgcagacggcgctccgtgagcgg
ctcctgggcgccgtggtgtcgtgcttcaagcggcacggggcggccgccatcgacaccccc
gcgctcgagctgcgggagacgctgatggggaagtatggggaggacacgaagctcatctac
gagctgcaggaccagggaggggagctgctggccctgcgctatgacctcaccgtgcccttt
gctcgctatctggccatgaacaaggtcaccaacatgaagcgctaccacgtcgccaaggtg
tacaggagggacaacccagccacaacccggggccgctaccgcgagttctaccagtgcgac
tttgacattgccgggcagtttgacccgatgattcccgatgctgagtgcctgaagatcgtg
cacgagatcctgagtgacctgcagctcggggacttcatcatcaaggtcaacgaccgtcgg
attttgaatggtgtgtttgctgtctgtggtgttccagagagcaagttcatatctgcctgc
tccaccgtggacaagctggacaaggtgccatgggaagaagtgaggagcgagatggtggga
gagaaggggctctctcccgaggctgcggatcgcattggggagtatgtccagctccatggt
gggctggacctgatcgagcgtcttctccaggacccaaagctgtcccagaacaagctggcc
aaggaggggctgggggacatgaagctgctctttgagtacctgaccttgtttggcatcaca
gagaagatctccttcgacctgagcctggcacggggcctggactattacacgggggtgatc
tttgaggctgtgctgctgcatcaggagaacgagcacgtggaggaggcggtcagcgttggg
agcgtggccggaggcggccgctatgacgggctggtggggatgtttgatcccaagggccgg
aaggtgccctgtgtgggggtcagcattgggatcgagcggatcttctccatcctggaacag
agactcgaggcttctggggagaaacttcgaacaactgagacacaagtgctggtggctaca
ccacagaaacacttgcttcctgccagactgaagctcatctccgagctgtgggacgcaggg
atcaaggcagagatgctgtacaagaaggatcctaaattgctgaagcagctgcaatattgt
gaggacacagggatcccccttgctgccattgtgggagagcaggagctggcagacggagtc
gtcaagctgcgagatgttgcaacaagagagcaggttgacatccccagagaaaagcttatt
gatgagatccggagaaggctggagccctga
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