KEGG   Aphelocoma coerulescens (scrub jay): 138118492
Entry
138118492         CDS       T10543                                 
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:acoe03000]
    138118492 (SOX21)
Transcription factors [BR:acoe03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    138118492 (SOX21)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp HMG_WDHD1 TGF_beta_GS
Other DBs
NCBI-GeneID: 138118492
NCBI-ProteinID: XP_068885614
LinkDB
Position
1:42175501..42176419
AA seq 281 aa
MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHGG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq 846 nt   +upstreamnt  +downstreamnt
atgtccaagccggtggatcacgtcaagaggccgatgaacgccttcatggtgtggtcgcgg
gcgcagcgacggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgtctgggcgccgagtggaagctgctgaccgagtcggagaagcggcccttcatcgacgag
gccaagcggctgcgggccatgcacatgaaggagcaccccgactacaagtaccggccgcgg
cggaagcccaagacgctgctcaagaaggacaagttcgccttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcacggcggc
gcggccggcgggctggtgcccgagtcgctcctggccaacccggagaaggcggcagccgcc
gctgccgctgccgccgcccgcgtcttcttcccccagtcggccgccgccgctgccgcagcc
gccgccgccgcggccgccagcagcccctactccctgctggacctgggctccaaaatggcc
gagatctcatcctcctcctcttcctcgggctccgggttgccctacgcctcctcgttgggc
taccccggcgccggcggggcgggtgccttccacggggccgccgctgccgccgccgccgcc
gcagccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttatcccgcagcctacgccgcggcc
ctatga

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