Aphelocoma coerulescens (scrub jay): 138118492
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Entry
138118492 CDS
T10543
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138118492 (SOX21)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138118492 (SOX21)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
138118492
NCBI-ProteinID:
XP_068885614
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Position
1:42175501..42176419
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AA seq
281 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHGG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggatcacgtcaagaggccgatgaacgccttcatggtgtggtcgcgg
gcgcagcgacggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgtctgggcgccgagtggaagctgctgaccgagtcggagaagcggcccttcatcgacgag
gccaagcggctgcgggccatgcacatgaaggagcaccccgactacaagtaccggccgcgg
cggaagcccaagacgctgctcaagaaggacaagttcgccttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcacggcggc
gcggccggcgggctggtgcccgagtcgctcctggccaacccggagaaggcggcagccgcc
gctgccgctgccgccgcccgcgtcttcttcccccagtcggccgccgccgctgccgcagcc
gccgccgccgcggccgccagcagcccctactccctgctggacctgggctccaaaatggcc
gagatctcatcctcctcctcttcctcgggctccgggttgccctacgcctcctcgttgggc
taccccggcgccggcggggcgggtgccttccacggggccgccgctgccgccgccgccgcc
gcagccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttatcccgcagcctacgccgcggcc
ctatga
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