Aphelocoma coerulescens (scrub jay): 138118604
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Entry
138118604 CDS
T10543
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04010
MAPK signaling pathway
acoe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138118604 (CACNA1H)
04020 Calcium signaling pathway
138118604 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138118604 (CACNA1H)
Ion channels [BR:
acoe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
138118604 (CACNA1H)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
138118604
NCBI-ProteinID:
XP_068885799
LinkDB
All DBs
Position
14:9872623..10030414
Genome browser
AA seq
2415 aa
AA seq
DB search
MSAGDSREPRPAEVRVPITAPRRPEQPPEDAGTGSGSGSGSGSSSGSPGREPPAELGSEE
EEQVPYPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCEDV
ECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMMEY
SLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGI
VGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRPDEAEENPFICSSHRENGMQRCSNIP
SRKESKVECTLSMDSYSPSLASPEPSRNSCINWNQYYNVCMAGDVNPHNGAINFDNIGYA
WIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQ
RENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTIRLYNNWQSKRR
KKVNPNSSSSGQSQRSRRRITSIHHLIHHHHHHHHHHYHISNGSPRGPRANPEICELELQ
VMKPGRQLMLPPPPSPRPQGPAAPRADAEAVHSIYHADCHVEGPPGGCKAPSAPAGSKLA
GLATHGNMNYPTILPSPGSKGGSTPLPKGKKNGNSPVAVVNSPGNLGLDSYGKLQQLVGE
HGLRRTPSRLSGLSTAGALPSPGGPRLSCELQDCPFCASLLDDPEFALSDSDSNGDSDSN
GVYEFTQDLRHGDHRDQLQQQRVRRRRKKKKAKERNKVTKLWRAFGTKLKRIVESKYFNR
GIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGIFGYIKNPY
NIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVAT
FCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWN
VVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSAN
FEDEFEKLKDFRATEMKMYSLAVTPNGHLEGRGAMPPPIIMRTAATPMPTPKCSPHLDSL
HAFGDSRRGSNASLEPTGYDQKSLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAPSLKKK
NQSGERESLLSGEGKGSTDDDSDDAKSSTLSRPSLPRRAESLDYRGSLELPELLRVPSVR
QLGLGPAALLPAEFHDCNGKMGHGPGEFFLRVDGHKEDALDYEDDLEDSYCYRIRKALEP
YKPRWCKTHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDP
LSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDII
VSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAF
FIIFGILGVQLFKGKFYYCDGPDVKNITTKADCTNAHYKWVRRKYNFDNLGQALMSLFVL
SSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHK
CRQHQEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYSPARRYIHSLCTSHYL
DLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEALLKLVAFGFRRFFKD
RWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALL
DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSDENPCEGLSRHATFTNFGMAFL
TLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVL
MKHLEESNKEAKEDAEMDAEIELEMSRGTNAAGGSRGGAGAPESRALHGNQEHTKAVLQG
KHQALGSAASLRPQDSHNLLTVRKISVARMHSLPNDSYMFRPVTPAKAPFPLHEVEMETY
PCKAQRGSITSIRSQPVGTSSSLRVPMESLPLAARSSGHEGRHRWKVLPPHGTPRSPALN
KLLCRQEAVRTDSVDGQTQERKDSLQAEPGEPQPSAKQPQSTLTPSPLHSPLPATPPRSP
PSSPHRPLGPLARKHTCGQHSIPSRPPSPASPSGPEGCQGEPSDLADEEVRHINSSAKDW
AEEHSDPSSRSTSPFTSPAPSPVPLKNCSTSSLSCKEKDLKKFYSTDTKGFLSKPSWADE
QRRHSIEICPSGGAPDCGFQDPAEDKQRPPAHVQPEADYIHGARRKKKMSPPCISIDPPM
EDDTGAAPRTKPSENTLLRRRTPSCEFPAYRESLELAESQPPCRGEHLSIPNFSFEQLDG
GSLSSLSELLDSGQSTPASMDSRPDAELKKTDHLKTQWSNGERSKELLGTAKSPLRKQDL
GPMTVATEEGTDDPV
NT seq
7248 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggcgacagccgcgagccgcgcccggccgaggtgcgggtgcccatcacggcg
ccgcgccgccccgagcagccgcccgaggatgccggtaccggctccggctccggcagcggc
tccggctcgagcagcggctcccccggccgcgagccgcccgccgagctgggctccgaggag
gaggagcaggtgccgtacccggcgctggcacccaccgctttcttctgcctcaagcaaacc
acccgcccgcgcagctggtgcctgaggctggtctgtaatccctggttcgagcacgtgagc
atgctggtgatcctgctcaactgcgtcaccctgggcatgttccagccctgcgaggacgtg
gaatgccagtcggagcgctgcaccatcctggaggcatttgacgacttcatcttcgccttc
tttgccgtggaaatggtcatcaagatggtggccctgggcatctttgggcagaagtgttac
cttggagacacctggaatcgcctggacttcttcatcgtcatggcagggatgatggaatat
tccctggatggacacaacgtgagcctctccgccatccgcaccgtccgcgtcctgcggcca
ctgcgggccatcaacagggtcccaagtatgaggatcctggtgaccctgctgctggacact
ctgcctatgttaggcaacgtcctcctcctgtgcttcttcgtcttcttcatcttcgggatt
gtcggggtccagctctgggcggggctgctgaggaacaggtgctttctagacaggaatttt
gccatgacgtacaacctgaccttcctgcacccctactaccggccggacgaggcggaggag
aaccccttcatctgctcctcgcaccgggagaacgggatgcagaggtgctccaacattccc
agcaggaaggagtccaaggtggagtgcaccctgagcatggattcctacagccccagcctg
gccagccccgagcccagcaggaattcctgcatcaactggaaccagtactacaacgtgtgc
atggccggggacgtgaacccccacaacggggccatcaattttgataatattggatatgcc
tggattgctatttttcaggtgataaccctggaaggatgggtggacatcatgtattacgtg
atggatgcacattctttttacaattttatatattttatactgctcatcatagtcggctcc
ttcttcatgattaacctgtgcctggtggtgatagcgacccagttttcggagaccaagcag
cgggagaaccagctgatgcaggagcagcgggcgcgctacctgtccaacgacagcaccatc
gccagcttctccgagccgggcagctgctacgaggagctgctcaagtacatctgccacatc
ttcaggaaggtgaagcgaaggacaatccgcctctacaacaactggcagagcaaacgccgg
aaaaaagtcaaccccaacagcagcagcagcgggcagagccagcggagcaggaggagaatc
acctccatccaccacctgatccaccaccaccaccaccaccaccaccaccactaccacatc
agcaacgggagcccccgtgggcctcgtgccaaccccgagatctgcgagctggagctgcag
gtgatgaagcctggcaggcagctgatgcttccccctcctccctcgcccaggccgcagggc
cctgctgctccccgtgccgacgccgaggccgtgcacagcatttaccacgcggattgccac
gtggaggggccccccgggggctgcaaggctcccagtgcccctgctggcagcaaactggcc
gggctggccacccacggcaacatgaactaccccaccatcctgccctcccctggcagcaag
ggcggctccacgccccttcccaaagggaagaagaacgggaattctccggtggccgtggtg
aacagcccggggaatttgggcctggattcttacgggaagctgcagcagctggtgggagag
catggtctccgccggacacccagccggctgtcagggctgagcacagccggggcactgccc
agccctggtggcccccggctgagctgcgagctgcaggactgtcccttctgcgccagcctc
ctggacgaccccgagttcgccctcagcgactccgacagcaacggcgactccgacagcaac
ggcgtctacgagttcactcaggacctgcggcacggcgaccaccgggaccagctccagcag
cagcgggtcaggaggaggaggaagaagaagaaagccaaggagaggaacaaggtgacaaag
ctgtggcgggcattcggcaccaaactcaagcggatcgtggagagcaaatacttcaaccgc
gggatcatgatcgccatcctcatcaacaccctcagcatgggcatcgagtaccacgagcag
ccagacgagctgaccaacgccttggagatcagcaacatcgtcttcaccagcatgttcgcc
ctggagatgctcctgaaactcctggccttcggaatctttggctacatcaagaacccctac
aacatctttgacgggatcatcgtggtcatcagtgtctgggagatcatcgggcagtcggac
gggggcctgtccgtgctccggaccttccggctgctccgcgtgctgaagctggtgcgcttc
atgcccgccctgcgccgccagctcgtggtgctcatgaagaccatggacaacgtggccacc
ttctgcatgctgctcatgctcttcatcttcatcttcagcatccttggcatgcaccttttt
ggatgtaagttcagcctgaaaaccgacacaggagacacagttccagacaggaagaatttt
gattccttactctgggccatcgtgaccgtgttccagatcctcacgcaggaggactggaac
gtggtgctgtacaacgggatggcctccacctcctcgtgggccgccctctacttcgtggcc
ctgatgacctttggcaattacgtgctcttcaacctgctggtggccatcctggtggaagga
ttccaggcagagggagatgccaacaggtcagacacagatgaggacaagacatctgccaac
ttcgaggatgagtttgagaagctgaaagacttccgagcaacagagatgaagatgtactcc
ctggctgtcacccccaacgggcacctggagggcaggggggccatgcccccgcccatcatc
atgcgcacggcagccaccccgatgcccaccccaaagtgctccccacacctggactccctg
cacgcctttggggactcgaggagaggcagcaacgcctcgctggagcccacaggctacgac
cagaagtccttgtccagccttcgcagctccccctgcgccaactggggcaccagcagcaac
tggggcagccgccgctcgagctggaacagcctgggcagggccccgagcctcaagaagaag
aaccagtcgggagaacgggagtccctgctgtccggagagggaaaaggcagcacggacgac
gactcggacgacgccaagtccagcacgctcagccggccctcgctgccccgtcgggcggaa
tccctggattaccgcggctccctggagctgcccgagctgctccgggtgccctccgtgcgc
cagctcggcctggggcccgcggccctgctgcccgccgagttccacgactgcaatggcaag
atgggccacggccccggagagttcttcctgagggtggatggccacaaggaggacgccctg
gactacgaggatgacttggaggatagttattgctaccggatccgcaaagccctggagccc
tacaaaccccgctggtgcaagactcacgaggactggtccctctacttgttttccccacag
aacaggttccgagtgatgtgccagaaggtcattgcccacaaaatgtttgaccacgtggtg
ctggtctttatcttcctcaactgcatcaccatagctctggagagaccagacatcgacccc
ctgagcacggaaaggatattcctgagtgtctctaattacatcttcactgccatctttgtg
gctgaaatgatggttaaggtggtggcccttggctttttctctggggagaacacctacctg
cagagcagctggaacgtcctggatggagtcctggtctttgtatccatcattgacatcatc
gtgtccatggcatcagcaggaggagccaaaatcctgggagtccttcgtgtgttgaggctt
ctgcggaccctgagacctctgcgagtcatcagcagagccccaggtctgaagctggtggtg
gaaaccttgatctcctccttgaggcctattgggaatattgttctcatctgctgtgctttc
ttcatcatctttgggattttaggggtccagctttttaaaggcaagttctactactgtgat
ggccctgatgtcaaaaacatcaccacgaaggccgactgcaccaacgctcactacaaatgg
gtccggaggaagtacaacttcgacaatttggggcaggccctgatgtccctgtttgtcctc
tcctccaaggacggctgggtgaacatcatgtacgatgggctggacgccgtgggcattgac
caacagcccatccagaaccacaacccttggatgctgctctacttcatctccttcctgctc
atcgtcagcttcttcgtgctcaacatgttcgtgggggtggtggtggagaacttccacaag
tgccggcagcaccaggaggcggaggaggcgcggcgccgggaggagaagcggctccgccgc
ctggagaaaaagcgcaggagtaaggagatgtacctgtctgaagcccagcgccggccctac
tacgccgactactcgccggcgcggagatacatccacagcctgtgcaccagccactacctc
gacctcttcatcaccttcatcatcggcgtcaacgtcatcaccatgtccatggagcactac
aaccagcccaagtccctggatgaagccctcaagtactgcaactacgtgttcaccatcgtc
tttgtgttcgaggcgctcctgaagttggtggcatttggtttccggaggttctttaaggac
aggtggaatcagctggacttggccatagttctcctatcaatcgtggggatcacgctggag
gagatcgagatgaacgctgcgcttcccatcaatcccaccataatccggatcatgagggtg
ctcaggatagccagagtgctgaaactgctgaaaatggccacgggcatgagagctctgctg
gacacggtggtgcaagccctgccccaggtagggaaccttggcctactttttatgctcctg
ttttttatctatgctgccctgggagtggaattgtttggcaagctcgattgcagtgatgag
aacccctgtgaaggcctgagccgccacgccaccttcaccaacttcggcatggccttcctc
accctcttcagggtgtccacgggggacaactggaatgggatcatgaaggacacgctccgg
gaatgcactcgggaggacaagcactgcctcagttacctgcccgtcatctcccccgtctac
ttcgtcaccttcgtcctcatcgcccagttcgtcctggtcaacgtggtggtggcagtgctg
atgaagcacctggaggagagcaacaaggaggccaaggaggacgctgagatggatgctgag
atcgagctggagatgtccagaggaaccaatgctgctggcgggagccggggaggggcgggg
gcccctgagagccgggcgctgcacgggaaccaggagcacaccaaggccgtgctgcagggg
aagcaccaagccctgggcagtgcagcctccctgaggccccaggattcccacaacctgctg
accgtccgcaagatctccgtggcccggatgcactccctgcccaacgacagctacatgttc
cggcccgtgactccggcaaaggccccgttccccctgcacgaggtggagatggagacgtat
ccctgcaaagcccaaagaggatccatcacctccatccgctcccagcccgtggggacgagt
tcctcgctgagagtgcccatggagtcgctgccgctggccgcgcgctcctccggccacgaa
gggcggcaccgctggaaggtccttcccccccacggcaccccccgatctcctgctctcaac
aagctgctctgcagacaggaggccgttcggacggactcggtggacggacagactcaggag
cgcaaggacagcctgcaagcagagcctggagagccccaaccatcagcaaagcagccccag
agcaccctcacccccagccctctccattcccccctcccagccacccctccgcgctccccc
ccatcctcccctcaccgaccccttggccccctggcacggaagcacacatgtggccagcac
agcattcccagccggccacccagccccgccagcccctctggccccgagggctgccagggc
gagccctcggacctggctgacgaggaggttcggcacatcaacagctcagccaaagactgg
gcagaggagcactcggaccccagcagccgctccacctcacccttcacctcgccggccccg
tcccctgtgcccctcaagaactgcagcacaagcagcctctcctgcaaggagaaggacttg
aagaagttctacagcaccgacaccaagggcttcctcagcaagcccagctgggccgacgag
cagcggcgccattccatcgagatctgcccctccggcggcgccccggactgcggcttccag
gaccccgccgaggacaagcagcggccccctgcccacgtccagccagaggccgactacatc
cacggagcccggaggaagaagaagatgagcccgccctgcatttctatagatcctcccatg
gaggatgacaccggggcggccccacgcaccaaaccctccgagaacaccctgctgcggagg
aggaccccgtcctgcgagttcccggcctaccgagaatccctggagctcgcggagagccag
cccccgtgccgcggggagcacctcagcatccccaacttctccttcgagcagctggacggc
ggctccttgagcagcctctcagagctgctggacagcggccagtccacgccggcctccatg
gactcgcggccggacgcagagctgaaaaagacggatcacttaaaaactcagtggagcaac
ggcgagaggagcaaagagctgctgggcactgccaagagccccctgcggaagcaggacttg
ggccccatgactgttgccacagaagaaggcacggatgacccagtatag
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integrated database retrieval system
