Aphelocoma coerulescens (scrub jay): 138118614
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Entry
138118614 CDS
T10543
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acoe01002
]
138118614 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138118614 (USP42)
Enzymes [BR:
acoe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
138118614 (USP42)
Peptidases and inhibitors [BR:
acoe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
138118614 (USP42)
Ubiquitin system [BR:
acoe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
138118614 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
138118614
NCBI-ProteinID:
XP_068885825
LinkDB
All DBs
Position
14:15007369..15025824
Genome browser
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRTFLGQRGANSKQAAFMGPRLPPHMIKSSSRLNGNGPLKEDPSTVGVAVKRPSS
APPTACVQNWAISRPSMTDPSKPQKITISIHNKLPTRQTVSQAECPSSAVEEEDLKPIPS
ATITNSSAAEPTSNLATVSVATNVSKQEVPDEIFVEPAVNGNPKLCSDTTVPYGAEPSGK
SEESKGLFKRNCNVISSNGILIGKVVRTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLETMPKALSPDPQGILESLTYSQLNSL
SEEKSVSGSQKSSDSDGLMETVVMEALFAYEDSRKVSSNFSCEVEKLFTQSDSETVFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDTEGEFLGQCESEDIRDKDKLRRSKEPELISK
ENPLYMKGSPESKEKLGQTSSIKPDIECSSKKLASLDITDKCQDTKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGLSNKICEEDDKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRSKPDDHSHRRRSSHSMETNKQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRERYYQDEPRRWEKCRYYNDYYSSHGTRDGR
ERKSSHCDKDYDKLSQAYSRSHKDYHCKSRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYSRERHTLPPVAAHSNFEDSSRENEKEKLRNSKRKYSHQEESGSDIEKKCRKIDDQ
RIKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLE
YLDPRFQKKTWEKKEESHPADDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMASNEYV
RDVELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacggtct
gacaaatctatgaaaccccgtactaaaaaaatgacatcacgcactgcaagtttgggccgg
gtacctcctacagaagatccaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcttctcaaaaatcaaagccttttgcccaaagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcaa
caaacacagagtgttggagttgggctgcagaacctcggcaacacatgtttccttaattct
actctccagtgtttgacctacacgcctcctcttgccaattacatgctttctcttgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgccatcaaacctacgtctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaagttagacagatcttct
caagccaccacgcttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcagtgtcggatacgtacgagccatttctcgacgttactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccagaacaactggac
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttccagcatcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatccattggagaacccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcataaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctacgatttgacgctgggcgagcgagccttctacctg
cccgcgccctcctatccccgcaccttcctcggccagcgcggagccaacagcaagcaggct
gcatttatggggccacgcctgcctcctcacatgatcaagagttccagtcgcttaaatgga
aatggacccttgaaagaggatcccagtactgttggtgttgctgtaaaaaggccatcttca
gctccaccaacagcttgtgttcaaaactgggccatttccaggccttcaatgacagaccct
tcaaaaccccagaagatcacgatcagtattcacaacaagctgcccacacgccagacggtg
tcgcaggcggagtgtccgagcagcgctgtggaggaggaggatctgaagcccattccttca
gccacaattacaaactcttccgcagcagagcctacctcaaacctagccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgaaatctttgttgagccagcagtgaat
ggaaaccctaagctctgttctgataccacagtcccatacggtgcagaaccttcaggaaaa
tccgaggagtccaagggcttgtttaaaaggaattgcaacgtcatatcttccaatggaatt
ctgattgggaaggtggtccgtacattgcataattcccattcgtcctgtcagaatgctgaa
gaaagatcccaacatgagctgccaaaaattgattccttaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacctgtt
aaaccttctgagattttcttctctaaagcaaatggagtgcttgaaacgatgcctaaagct
ttgtcaccagatcctcaaggtatcttagaatctcttacatacagccagttgaacagcttg
tcagaggagaaaagtgtctctggatctcagaaatcttctgacagtgatggtcttatggaa
actgtagtgatggaagcactgtttgcctatgaagattccaggaaggtttcttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaaccgtttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatattaatggtcag
cacaaggttaggaaaaaatccttggatactgaaggtgaatttcttgggcagtgcgagtct
gaagacatcagagataaagacaaactaagaagatcaaaggaacctgaactcatttcaaaa
gaaaatcctttgtacatgaaagggtctcctgagagcaaagagaaattagggcaaacttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagat
aaatgccaagatacaaaggacatttctaataactatgtagaggtaccacctgttaatgac
tcctctattacaaagctggataaagtattggaaagtcaattttctagagcagatgaggga
ctgagtaataaaatatgtgaagaagatgataaacatatgaaaaaaaataagaaaaaaatc
cacgactctaaaagaactgacaaagagcactaccggaggaagagagaaaactcagacact
gaggagaaggagaggcaaaccagaagcaaaccagatgatcattcccacaggaggaggagc
tctcacagcatggaaacaaacaagcaaagccgtcataagcaggagtattgcagtgagagc
aagtacagatcctcccacaatgaaagaaacagtcccagtaacggcaggagctcaggaaaa
tattctcgttacagatcccgaagcagagaaaggacagatccagacaggaatagatattat
tattccaaaggagacagaccttggattagagagagatactatcaagatgaaccacggaga
tgggaaaaatgcagatactacaatgattattattcctcccatggaacaagggatggtagg
gagaggaagtcctctcattgtgataaagactatgacaaattgagccaagcttacagcagg
tcacacaaggattatcattgcaaaagcagatgggctcacagcacactctcccgagaggag
gatgtgcatcacttcagcagccacagagcaaacttccaccactgttcagtacctcagcag
cactcggaaaaatactctcgtgaaaggcacacacttccaccagtggcagctcactcaaat
tttgaggactcttcccgggaaaatgaaaaagaaaaactaagaaatagcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaatgccgaaagatagatgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaactgaaagacttattggaa
tatttagatcctcgtttccagaagaaaacatgggagaagaaggaagaatcccatcctgca
gatgaccatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcatccaatgagtatgtc
agagatgtggagctgactgatgaaagccttcaatactcagactga
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