Aphelocoma coerulescens (scrub jay): 138118628
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Entry
138118628 CDS
T10543
Symbol
AP5Z1
Name
(RefSeq) AP-5 complex subunit zeta-1
KO
K19025
AP-5 complex subunit zeta-1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138118628 (AP5Z1)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
138118628 (AP5Z1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Neil1-DNA_bind
Motif
Other DBs
NCBI-GeneID:
138118628
NCBI-ProteinID:
XP_068885844
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Position
14:complement(11503605..11513028)
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AA seq
807 aa
AA seq
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MFTAAAESFLRQAREIQEEELRRFGARVSALLQGPEPGPEAVDGLQRLHLTVAATKYPRK
LDGKFVELLQTVLCSPKSPEQIQVLCAAILREMSPCNDLILSCDEIQDTKLLSLVSSILL
AQGNKAEVAAVGQHVVKALEKRLPEGQSARFLLPVLANVISLSPESLTEEQTNVVSKKLA
DWLRYASIQQGMAQPSGGFFSSPRTKQPAPVTEVDGAVATDFFTVLSVAQHYTQDQWLNV
QTFSMLRNWLLCYGGKELNTTNPGDKAGMDRSVTCMVSTAPTAGRLLPPRERLREKAFEY
CQRLTEQSNRRPLKKDDGDLQKACLIEAVTIMDIICKQDSSYVCRAVSFLKVLHSRICGD
ASYARALLPIAQFFLNHSKLAAVDSEAIYKHLFTDIPAQLFHNPSLAFEFVQFCKDNSQF
FTDSSIFRQSFPNLFKFLAWNSPPLISEFVDLLPFLLDAGTAIEIFHLLLDLPCLTAALD
IQLRAAALPASEKSSSDPAGKPARCLEAFRHPLYKSMFQYLLRTKSAPEDAPESLVPLRQ
LLGSLAGSPRVVQCAEVVPVLLELFFGVVAEFADGSLINQLVVLLLQRSDQLYEIPSFKD
DVYRVLSSQLVRLCRLRPALVVELSTEILEFSGTVSNIQSKEAIFTHMVWAIGEYLSVSY
DKRCTVEQITRFFETLEAVLFEITQLRPQAGTPSCAPRAISVLMATLTKLAARSQDLIPR
VSMFLSKMRTFVQSPAVTSVYCEEDLEEILIRATELMNLLKMPSVAQFVFTPPVASTRFQ
REVNDSLPLALRMVTQLLEPAPGSVPV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggcggctgccgagagcttcctcaggcaggcgagggagatccaggaggaggag
ctgcggagattcggcgcccgcgtgtccgccctgctgcagggccccgagccgggccccgag
gccgtggatgggctgcagaggctgcacctcaccgtggccgccaccaagtacccccgcaag
ctcgatggcaagtttgtggagctgttgcagactgtgctgtgctcacccaaaagtcctgag
cagattcaggtgttatgtgctgccatcctgagagagatgtcaccttgcaacgatctgatc
ctctcctgtgatgaaattcaagatacaaagctcttgagcctggtatcctccatccttctg
gctcagggaaataaggctgaagtggctgctgtggggcagcatgttgtgaaagcccttgaa
aaaagactgcccgagggtcagagtgctcggttccttcttcctgtcctggcaaatgtcatc
agcctttcaccagaatctctaacagaagagcagaccaatgttgtcagtaaaaagctggct
gactggctgaggtatgcaagcattcagcaaggaatggctcagccctctggaggcttcttc
tccagtcccagaaccaaacagcctgctcctgtcacagaggtggatggtgctgttgccaca
gacttcttcacagtgctctcagtggctcagcactacacacaggaccagtggctcaacgtg
caaaccttctccatgctgagaaactggctgctgtgctatgggggcaaggagctgaacacc
actaatccaggtgacaaagcaggaatggacaggtctgtcacatgcatggtctccactgca
cccacggctggccggctgcttccccccagggagcgtctgcgggagaaagccttcgagtac
tgccagcgcctcactgagcagagcaaccgccgacccctgaagaaagatgatggagacctg
cagaaagcttgtctcattgaggcagtgacaatcatggacatcatctgcaaacaggactcc
tcctacgtgtgccgtgctgtctccttcctgaaagtcctgcacagcaggatctgtggggat
gcctcttatgccagggcactgctgcccattgcccagttcttcctgaaccacagcaaactg
gcagctgtggactcggaggccatctacaaacacctcttcacagatatcccagctcagctt
tttcacaacccatcactggccttcgaatttgtccagttctgcaaagacaacagccagttc
ttcacagactcctccatattcaggcagagtttcccaaatctcttcaagttcctggcgtgg
aacagcccacctcttatctctgagtttgtggaccttctcccgtttctgctggatgcaggc
acggccattgagatcttccatttgttgcttgacctgccctgtttgacagcagctctggac
atccagctgagggcagctgctcttcctgcctccgagaagtccagcagcgacccagctggg
aaaccagccaggtgtctggaggcctttcgccatcccctctacaagagcatgttccagtat
cttctccgcaccaagtctgctcctgaggatgccccggagagtctggttccacttcggcag
ctgctgggatccctggctggcagcccaagggtggtgcagtgtgcagaggttgtccctgtc
ttactggagctctttttcggggtggtggcagagtttgcagatgggtctctgataaaccag
ctggtggtgctgctgctgcagaggagtgaccagctctatgagatcccgtcatttaaagat
gatgtgtacagggtgctgagctcacagctggtgaggctctgcaggctgcgccctgcactc
gtggtggaactgtccacggagatcctggagttctcgggaacagtcagcaacatccagagc
aaggaggccatcttcacccacatggtgtgggctattggcgagtacctgtcggtgtcctac
gacaagcgctgcacagtggagcagatcacgcggttcttcgagaccctcgaggccgtgctc
tttgaaatcacccagctccggccacaggccggcacccccagctgtgcccctcgtgccatc
agtgtcctcatggccaccttgaccaagctggcagcccgcagccaggacttgatccccaga
gtgtccatgttcctgtccaagatgaggacatttgtgcagagccctgctgtcacctctgtt
tactgcgaggaggacctagaggagatccttattcgggcaactgagctcatgaacctgctg
aaaatgcccagcgtggctcagtttgtgttcaccccacccgtggccagcacacggtttcag
agggaggtgaatgactccctccctttggccctcaggatggtcacccagctcctggagcca
gctccaggctccgtgccagtgtga
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