Aphelocoma coerulescens (scrub jay): 138118772
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Entry
138118772 CDS
T10543
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe00260
Glycine, serine and threonine metabolism
acoe00630
Glyoxylate and dicarboxylate metabolism
acoe00670
One carbon pool by folate
acoe01100
Metabolic pathways
acoe01200
Carbon metabolism
acoe01230
Biosynthesis of amino acids
acoe01240
Biosynthesis of cofactors
acoe04981
Folate transport and metabolism
Module
acoe_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
138118772 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
138118772 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
138118772 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
138118772 (SHMT1)
Enzymes [BR:
acoe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
138118772 (SHMT1)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
138118772
NCBI-ProteinID:
XP_068886078
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Position
14:10177088..10182979
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AA seq
482 aa
AA seq
DB search
MASSTQGLPSAELWASHNKMVMEPLDTNDPEVHSIIKKEKQRQRLGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYQLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYI
DYDQLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADNNGAYLMADMAHISGLVAAGVV
PSPFDHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALRQAMTPEFKAYQQQVVANCKALSTALMEMGYDIVTGGSDNHLILV
DLRSRGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFRKV
AQYIHRGIELALRVQKDMSPKATLKEFKDKLEEPKYCGELKALKEEVEAFAATFPLPGLP
VL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcaacacagggcctccccagcgccgagctctgggcctcccataacaagatg
gtgatggagccgctcgacaccaacgacccggaggtgcacagcatcatcaagaaggagaag
cagcggcagaggctgggactggagttaatcgcgtcagagaacttcgcaagccgagcggtc
ctggaggccctgggatcctgcatgaacaacaaatactctgagggttacccaggacagagg
tactatggcgggacagagtttgtggatgagctggaaaggctgtgccagaagagagccctg
caggcctaccagctcgacccccagaagtggggagtcaatgtccagccctactcagggtca
cccgcaaactttgcggtgtacacggccctggtggagccccatggcaggatcatggggctg
gacctgcccgatggtggccacctcacccacgggttcatgacggacaagaagaagatctct
gccacctctgtcttcttcgagtccatgccctacaaggtcaaccccaagaccggttacatc
gactatgaccagctggaggagaacgcccggctcttccaccccaagctgatcatagcaggt
gtcagctgctactcgcggaacctggactacgcccgcatgcggaagatcgctgacaacaac
ggggcctatctgatggccgacatggcccacatcagtgggctggtggctgccggcgtggtg
ccctcgcccttcgaccactgcgacatcgtctccaccaccacccacaagaccctgcggggc
tgcagggccggcatgatcttctaccgaaaaggcacccgcagcgtggaccccaagacaggc
aaggagaccctctacaacctggagagcctcattaaccaggcagtgttcccagggctgcag
ggaggcccacacaaccacgccattgcagggatcgccgtggcgctgcgtcaggccatgacg
cccgagttcaaggcttaccagcagcaggtggtggccaactgcaaggcgctctcgactgca
ctgatggagatgggctacgacatcgtcacagggggctctgacaaccacctgatcctcgtg
gatctgcgcagcagaggcacagacggcggccgggccgagcgggtgctggagctctgctcc
atcgcctgcaacaagaacacgtgccccggtgatgtcagcgccctgcgccccagtggcctc
cggtttgggacgccagctctcacctcccgcggcttccggcaggacgatttccgcaaggtg
gcccagtacatccacagagggatcgagctggctctgcgcgtgcagaaggacatgagtccc
aaagccacactgaaggaattcaaggacaaactggaggagccaaaatactgtggggagctg
aaggcactgaaggaagaggtagaagccttcgcagccacgttcccactccccgggctgcct
gtcctgtaa
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