Aphelocoma coerulescens (scrub jay): 138118945
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Entry
138118945 CDS
T10543
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138118945 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acoe02000
]
138118945 (ABCA3)
Transporters [BR:
acoe02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138118945 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_23
AAA_22
DUF4162
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
138118945
NCBI-ProteinID:
XP_068886420
LinkDB
All DBs
Position
14:1677623..1710743
Genome browser
AA seq
1708 aa
AA seq
DB search
MVVLRQFGLLLWKNYILQKRQILVTVIEVCLPLLFAAILIALRHRVHSVSHPNATLYPTE
SVDDLPSFFSSRHASNPWELAYVPSNSSAVRSIAEAVERALPINIKAQGFTSERDFEEYV
RLDNRSGSVLAAVVFRHRFPHSSAPLPLQVEYELRFKYSPRNAPRSEQTGLNPNLDRDWH
TSYLFPLFQLPGPREAKFADGGTPGYLREGFLAVQHAVDRAIMQYHAGASSASLLENITV
VVQRFPFPAYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMHMMGLS
NWLHWSAWFLMFFLFLLVSVFFVTVLFCVKVSEQGAVLTNSDPTLVFTFLAIFSISSISF
NFMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLASCLISNVAMAMGAQ
LIGMFEGKGTGIQWRDLMKPISVDDNFTLAQVLGMLLLDSVLYGVVAWYVEAVFPGEYGV
PQPWYFFLTPSYWCGRPRTVVGKEKEEEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVF
KVGNKTKEAVKDLTVNMYEGQITVLLGHNGAGKTTTLSMLTGLHSPTGGQAYINGYEISQ
DMVLIRRSLGLCPQHDVLFDNMTVEEHLHFYAGLKGYPPSKCPEEINHILRILNLEDKRR
SLTKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQQQRSNRTILLT
THFMDEADLLGDRIAIMAKGELQCCGSSLFLKRKYGAGYHMVMVKEPYCNLGEISRLICQ
YVPNATMESNAGAELSFILPKESTHRFEALFTELEQRREELGIASYGASVTTMEEVFLRV
GKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKL
NTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQFLVPLIFTAFALIVAKTFPGPRDSSLLR
LTLEPYGQTIVPFSVSGTAGLPQRLGEQYVELLEAQRQSPLEVLGGLEEYLISRASEEGG
AFNEHYIAAASFEGAGNRTLVTALFNNQAYHSPATALMLADNAVLRVLAGPNASITVTNY
PQPRNITEKAKDQLMEGQTGFAIAINLLYGMASLASTFALLLVSERAIKAKHVQFVSGVY
VVNFWLSALLWDIINFLIPCALMLVIFQAFNVQAFTQDSHLVDVMLIFLLYGWAIIPLMY
LLSFFFSVAATAYTRLTIFNILSGTATFLAVTIMSIPELGLVDLSKTLDKVFLILPNYCL
GQCISDFYQNYEFIQFCTSSVEAIFICKAFNISYQMNYFSWESPGIGRYLTSLAVQGFSF
LFLLFLIETNLLWRLRTLVCGICRRRKWVALLNRVSVLPEDRDVADERKKVLESPPELLS
SLSSPLVIKELTKVYDSRESLLAVDRISLAVSKGECFGLLGFNGAGKTTTFKMLTGDESI
TSGDAFVDGHSILANIKKVQQRIGYCPQFDALLEHMTGRETLSMYARLRGIPERYIGSCV
ENMLRGLLLEPHADKLVRTYSGGNKRKLSAGIALIGGPPVIFLDEPSTGMDPVARRLLWD
AVTRTRECGKSIIFTSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLLAKT
RSEEEGELQAFKAFVEKTFPGSVLKHEHQGMVHYHLTNKNLSWAQVFGALEKAKEKYRLE
DYSVSQISLEQVFMSFTRFQHYTEDRGK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgctcaggcagtttgggctgctgctctggaagaactatatcctgcagaagcgg
cagatcctggtgacggtgatcgaggtgtgcctgccgctgctcttcgccgccatcctgatc
gcgctgcggcaccgcgtgcactccgtcagccaccccaacgccaccctctaccccaccgag
tctgtggatgacctgcccagcttcttctcctcccggcatgccagcaacccctgggagctg
gcctacgtcccctccaacagcagcgccgtccggagcatcgccgaggcggtggagagagct
ctgcccatcaacatcaaagctcagggcttcacctcggagcgggacttcgaggagtacgtc
aggctggacaaccgctcgggcagcgtcctggccgccgtcgtgttccggcaccgcttcccg
cacagctcggccccgctgcccctccaggtggagtatgagctgcgcttcaagtacagcccg
aggaacgccccgcgcagcgagcagacggggctgaaccccaacctggaccgggactggcac
accagttacctcttccccctcttccagctgcccgggccccgcgaggccaagtttgctgat
ggggggacgccgggttatctccgggagggattcctggcggtgcagcacgcggtggacagg
gccatcatgcagtaccacgctggtgccagctctgccagcctgctggagaacatcactgtg
gtggtgcagcgcttccccttcccggcctatgtcaatgacctcttcctcctggccatccag
aaccagctgccgctgctgctcatgctcagcttcacctacacctcgctcaacatcgtccgc
gccgtcgtccacgagaaggagaagaagctgaaggagtacatgcacatgatgggcctcagc
aactggttgcactggagcgcctggttcctcatgttcttcctcttcctcctggtgtctgtg
ttcttcgtcaccgtgctcttctgtgtcaaggtgagcgaacagggagcggtgctcaccaac
agtgaccccacgctggtgttcaccttcctcgccatcttctccatctcctccatctccttc
aactttatggtgagcaccttcttctcacgagcaaacgtcgcagctgccgctggcggcttc
ctctacttcttctcctacatcccctacttcttcatctcgccccgctatgacctgatgtcc
cacagccagaagctggcatcctgcctcatctccaacgtggccatggccatgggggcgcag
ctcatcggcatgtttgaagggaaagggactggcatccagtggagggacctcatgaagccc
atcagcgtggatgacaacttcaccttggcccaggtgctggggatgctgctcctggactcg
gtgctctatggtgtggtggcctggtatgtggaggctgtgttccccggggagtacggtgtg
ccacagccctggtacttcttcctcacgccctcgtactggtgcgggcggcccaggactgtt
gtggggaaagagaaagaggaggaggaggaccctgagaaagccttgaagagtcagtacatt
gaggaggaaccagctgacctagtgtcaggcatcaaaataaagcacctttccaaggtcttc
aaagtgggaaacaagacaaaagaggcagtgaaggacctgacagtgaacatgtacgaaggg
cagatcacagtcctgttgggacacaacggtgctgggaagaccaccaccctgtccatgctc
acagggctgcactccccgacgggcggccaggcctacatcaatggctacgagatctcccag
gacatggtcctgatccgccgcagcctggggctgtgtccccagcacgacgtcctcttcgac
aacatgactgtggaagagcacctccacttctatgcagggctgaagggatacccaccctcc
aagtgtcctgaggagatcaaccacatcctgaggatcctcaacctggaggacaagcgccgc
tccctgaccaaggctctctccgggggcatgaagcgcaagctgtccatcggcatcgccctc
atcggggactccaaggtggtgatgctggatgagccgacgtcggggatggacccagcctct
cgcagagccacgtgggatctcctgcagcagcagaggagcaacagaaccatcctgctgacc
actcacttcatggacgaggcagacctgctgggggaccgcattgccatcatggccaagggc
gagctgcagtgctgcggctcctcgctcttcctcaagcgcaaatatggggcaggatatcac
atggtgatggtgaaggagccctactgcaacctgggggagatctcccgcctcatctgccag
tacgtgcccaacgccaccatggagagcaatgccggggcagagctgtccttcatcctgccc
aaggagagcacacacaggtttgaggccctgttcacagagctggagcagaggcgggaggag
ctgggcatcgccagctacggcgcctcagtcaccaccatggaggaggtgttcctcagggtt
gggaagctcgtggactccagcatggatatccaggccatccagctgcctgctctgcagtac
cagcatgagagacgctccaacgactgggccatggatgactccagcagcctgagtggcatg
acagacatgacggacgacagcggggcgctcatcaccgaggactgctccagcatcaagctc
aacacggggttctacctgtgctgccagcagttctacgccatgttcatgaagcgggccatg
tacagctggcgcaactggaagatggtggcagcgcagttcctcgtgcctctgatcttcact
gcctttgccctcatcgtggccaagaccttcccgggcccgcgggactcgtccctgctgcgg
ctgacactggagccctacggccagaccatcgtgcccttctcggtgtcgggcaccgcgggc
ctgccgcagaggctgggggagcagtacgtggagctgctggaagcccagcgtcagtcgcca
ctggaggtgctgggtgggctggaggagtacctcatctcccgagcctctgaggagggagga
gccttcaacgagcactacattgcagctgcctccttcgagggagcagggaaccgcacgctg
gtcacggcgctcttcaacaaccaggcctaccactccccagccactgccctcatgctggca
gacaacgccgtcctcagggtgctggcaggccccaacgcctccatcaccgtcaccaactac
ccccagccccgcaacatcaccgagaaggccaaggaccagctcatggaaggccagactggg
tttgccattgccatcaacctgctgtatggcatggcctcgctcgccagcaccttcgcgctg
ctgctggtcagcgaacgcgccatcaaggccaagcacgtccagtttgtcagcggcgtttac
gtggtcaacttctggctttctgccctgctctgggacatcatcaacttcctcatcccttgt
gctctgatgttggtgatattccaagccttcaacgtgcaagccttcacccaggacagccac
ctcgttgatgtgatgctgatcttcctcctttatggctgggccatcatccccctcatgtac
ctcctcagcttcttcttctcggtggcagccacagcctacacccgtctcaccatcttcaac
atcctgtccggcaccgccaccttcctcgccgtcaccatcatgagcatcccagagctgggt
ttggtggacctctccaaaaccctggataaagtttttctcatcttacccaattactgcttg
ggccagtgcatcagtgacttctaccagaactacgagttcattcagttctgcacctcctcc
gttgaagccatcttcatctgcaaggccttcaatatcagttatcagatgaactacttctcc
tgggagagccctgggatcgggcgatacctgacctccttggccgtccagggtttctctttc
ctcttcctcctcttcctcattgagacaaaccttctctggagactgagaactctggtctgt
ggcatctgcaggcggcggaaatgggtggccctgctgaacagggtgtctgtgctgccagag
gacagggatgtggcagatgagaggaagaaggttttggagtcaccaccagaactgctgtcg
tctctcagcagccctctggtcatcaaggagctcaccaaggtgtacgacagccgggagtcc
ctgctggcagtggacaggatctccttggccgtcagcaagggggaatgctttggtctcctt
ggcttcaacggagcgggcaaaaccaccaccttcaagatgctgacgggtgacgagagcatc
acatcgggggacgcctttgtggatggccacagcattctggccaacatcaagaaggtgcag
cagcgcatcgggtactgcccgcagttcgatgccctcctggagcacatgacggggcgcgag
acgctgagcatgtacgcgcggctgcgcggcatccccgagcgctacatcggcagctgcgtg
gagaacatgctgcgggggctgctgctggagccgcacgccgacaagctcgtcaggacctac
agtggcgggaacaagcggaagctgagtgctggcattgccctcattggtggccctcctgtg
atcttcctggatgagccctccactggcatggaccccgtggcccggcgcttgctctgggac
gcagtgacacggacgcgggagtgtggcaaatccatcatcttcacctcccacagcatggag
gagtgcgaggcgctgtgcacacgattggccatcatggtgaacgggcagttcaagtgcctg
ggcagcccccagcacctcaaaagcaagtttggcagtggatacaccttactggccaaaacc
cggagcgaggaggagggcgagctgcaggccttcaaggccttcgtggagaagactttccca
ggcagcgtcctgaagcacgagcaccagggcatggtgcattaccacttgaccaacaagaac
ctcagctgggcacaggtctttggggccctggagaaagccaaagagaagtatcgcttggag
gactactcggtgagccagatctccctggagcaggtcttcatgagcttcactcgcttccag
cactacacagaggacagagggaaatga
DBGET
integrated database retrieval system
