Aphelocoma coerulescens (scrub jay): 138118978
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Entry
138118978 CDS
T10543
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138118978 (VPS35L)
Membrane trafficking [BR:
acoe04131
]
Protein recycling
Others
Retriever complex
138118978 (VPS35L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
138118978
NCBI-ProteinID:
XP_068886490
LinkDB
All DBs
Position
14:complement(15853559..15900238)
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AA seq
963 aa
AA seq
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MAAFPWHARSRNYVSESEVCKLESMPLDFGDYHPLKPITVTESKTKKMNRKGSTSSTSSS
SSSSMMDPLSSVLDGTDPLSLFAAAAEPVTAAPPMDGARRKRDKDESSAVGSDFEPWSSK
RGEILARYTTTEKLSINLYMGSEKGKATTTGSAVSEKVRTRLEELDDLEEGSQKELLNLT
QQDYMNRIEELNQSLKDAWSSDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDT
FGKLVYERILSMCVDNRVSLPDNFSPESVNDTAKETCLNWFFKIASIRELIPRFYVEAAI
LKCNKFLSKTGISECLPRLTSMIRGIGDPLVAVYARAYLCRVGMEVAPQLKESLNKNFFD
FLLTFKQIHGDTVQNQLVVQCVEIPLYLTLYSPAIDWILQCIAYHAPDVLLTEMMERCKK
LGNNALLLNSVMSAFRAEFIAARSMDFIGMIKECDESGFPKHLLFRSLGLNLALADPPEN
DRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCRHFTKREVNTVLADVIKHMTPDRAFE
DAYPQLQSIIQKVITYIYDFALLFSVEKFLPFLDMFQKESVRVEVCKCIMESFIKHQQES
TKDPVILNALLHICKTMHDSVNALTLEDEKRTLAALINGFIKMVSFGRDFEQQLSFYVEA
RSMFCNLEPVLVQLIHSVNQLAMETRRVMKGNHSRKTAAFVRACVAFCFITIPSLSSIFT
RLNLYLHSGQVALANQCLSQADAFFKAAVSLVPEVPKMISVDGKMRPSDAFLLEFLCNFF
STLLVVPDHPEQGVLFLVRGLLNVIQDYTWEDNSDDKVRIYTNVLHLLSAMTQEAYIYHV
DKVDSNDALYGGDSKFLAEINKLSETVVSQILDHLKTLGKEESLKRQSQLALYFFNTILA
HGDLRNNRLNQLSVNLWNLAQKHGFADTKTMVKTLEYIKRRSKQPEMSHFTELALRLPLQ
SRT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgttcccctggcatgcaagatcaagaaactatgtgtcagaatctgaagtgtgc
aaactggaatctatgcccttggattttggtgattaccatccactgaaacccattacagtt
accgaatccaagaccaagaagatgaaccggaaaggaagtacttcttctacctcctcttcc
tcctctagttctatgatggacccactgagcagtgtgttggatggcaccgatcccctgtca
ttgtttgcagcagctgcagagcctgtgactgctgctcctcccatggatggtgcacgaagg
aaacgggataaagatgagagctcagcagtaggaagtgactttgaaccatggtcaagcaaa
cgtggtgaaatccttgctagatacacaacaacagagaagctttctattaatctgtacatg
ggatctgaaaaaggaaaagccacaactactggttcagcagtttctgaaaaagtgaggaca
aggttagaagaactggatgatctggaagagggatcgcagaaagagctgttgaatttgact
cagcaggattacatgaaccggattgaagaactgaaccagtctttaaaggatgcatggtcc
tctgatcagaaagtgaaagctctgaaaatagtcatccagtgttctaagcttctttcagac
acaactgtaatccagttttatccaagtaaatttgttttaattacagatatccttgatact
tttgggaaactggtgtatgaaagaattctgtcaatgtgcgtggataaccgagtctctctg
ccagataacttttctccagagagtgttaatgatacggcgaaagaaacttgcttaaactgg
tttttcaagattgcttcaatcagagaactcattcccagattttatgtggaagcagcaata
ctgaagtgcaataagttcctatccaaaacggggatttcggaatgtctcccacggctaaca
tctatgattagaggaattggagatccactggttgcagtctatgccagagcatacctttgc
agggttgggatggaagtggcaccacaactcaaagaaagcctgaacaaaaatttttttgac
ttccttctaacatttaaacaaatccacggggatacggttcagaaccagctggtggtgcaa
tgtgtggagatccctttgtacttgaccctgtattctcctgctatagactggattttgcag
tgtattgcataccatgcccccgatgttctgcttactgagatgatggagagatgcaaaaaa
ttggggaacaatgctttgctgttgaattcagtaatgtcagcgttcagagcagagtttatt
gctgcgagatcaatggacttcattggcatgattaaagagtgtgatgagtctggattccca
aagcatctcctctttcgctccctgggcttaaacttggcattggctgatcctcctgaaaat
gatcgccttcaaatattaaatgaagcctggaaggtgattacaaagctgaagaacccacag
gattatatcaactgtgctgaagtgtgggtggagtatacctgcagacattttacgaagcga
gaggtcaatacagttctggctgatgttatcaaacacatgactcctgatcgagcatttgaa
gatgcttacccacagctgcagtcaattattcagaaggttattacctatatctatgacttt
gctctacttttttcagtggagaaattcttgccatttctggatatgttccagaaggaaagt
gtgagagtggaggtttgcaagtgcattatggaatcttttataaagcatcagcaggagtcg
acgaaggatcccgttatactcaatgctctcctgcatatctgtaagacgatgcatgactct
gtgaatgcactaacacttgaggatgagaaaagaacattagcagctctgataaatggattc
ataaaaatggtttcatttggccgtgactttgaacaacagctgagtttctatgtcgaagcc
aggtcaatgttttgcaatctggagcctgttctagtccagctgattcattctgtgaaccaa
ctagcaatggaaacaagaagggtgatgaaaggaaatcattccagaaagacagctgcattc
gtcagggcttgtgttgccttctgcttcattacaattccatctctgagcagtatcttcaca
cgtcttaatctgtatctgcactctggacaggtagctctggcaaaccagtgcctttctcaa
gctgatgcttttttcaaagctgcagtgagccttgttcctgaagtgccaaaaatgatcagt
gtagatggaaagatgcgaccttctgatgccttcctcctcgaattcctttgtaattttttt
tccacattattagttgttccggaccatccagaacaaggagtgttgtttcttgtgcgagga
ttactaaatgtgatccaggattatacttgggaggataacagtgatgacaaagtcaggatt
tatactaatgttttgcatctgctctctgcaatgactcaggaagcatatatctaccatgta
gataaagttgattccaatgatgctctgtatggtggagactccaagttcctggctgaaatc
aataaactgagtgaaacagtggtgtcacagatcctggatcatctgaaaaccctgggaaaa
gaggagtccctgaagcggcagagccagctggcactctatttctttaacaccattctggct
cacggggacctacgaaacaacagactgaaccagctttcagtcaatctctggaatctcgct
cagaaacacggcttcgctgacaccaagactatggtgaaaaccctggaatacatcaagagg
cggagcaaacaacctgaaatgagtcacttcacagagttggcccttcggcttcctctgcag
tccaggacctga
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