Aphelocoma coerulescens (scrub jay): 138119412
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Entry
138119412 CDS
T10543
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138119412 (TFIP11)
Spliceosome [BR:
acoe03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
138119412 (TFIP11)
Other components
Complex C specific factors
138119412 (TFIP11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
138119412
NCBI-ProteinID:
XP_068887372
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Position
15:complement(5009392..5018464)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSDEDSDDDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTPQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRIHKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
IIGKRHEGKHLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggagacgatggcgtggagatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccggcagcggcaccgccag
accaaggaggaggcgacttacggcgtgtgggccgagcgcgactcggacgaggagcggccc
agcttcggcgggaagcgctccagggattactcggcccccgtgagcttcgtcagtgctggg
ctgaggaaggcggcggccgaggagctctcggatgaggattcggatgatgatgagaagcct
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttaaaaacaggtggaaat
ttcaagcccagccagaagggctttgtgggaggctctaaatccttcgtggattttggcagc
tgggagagacacactaaaggaattgggcagaagcttctgcagaagatgggatatgtccct
ggaaggggtcttgggaagaacgctcaaggtatcatcaatcccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggtgcctatggctctgagaggaccccacagtccttgcaggac
ttccctgtggtggactcagaagaggaagctgaggaggaatttcagaaggagctcagccag
tggcggaaggacccgaacggaggcaagaaaaagcccaagtacagctataaaacagtggaa
gagctgaaagccaagggcaggatccacaagcagctcgcagcccctcagaaggagctgtcc
caggtcaaggtgatcgacatgacaggccgggagcagaaggtttattacagctacagccag
atcagtcacaagcacaacatcccagatgacagcccccagcagcccctgggcaaggactcc
aaaccccagggctttgccctgcccgagctggagcacaacctgcagctgctcatcgacatc
acggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctgagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtggaggagtgtgagaggcggatgcagcccggc
tgtgagaaccctctgaccctggatgagtgtgcaaagatctttgagaccctgcaggacaag
tactacgaggagtacaggatgtcagacagggtggacctggcagtggccatagtctatcct
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacctatggcacagag
atcatagccaagtggaagagcctgctggaaaacgatcagctgttatcccacagtgggcag
gacctgtcaacagatgcttttcacagactgatgtgggagatctggatgccatatgtcaga
aacatcgtggcgcggtggcagccgaggaactgtggatccatggtggatttcttggatagc
tgggtgaacgttgttcctgtgtggatactggataacattctggatcagctcatcttcccc
aagctgcagaaggaggtggagagctggaatccactgacggacacggtgccgatccactcg
tggatccacccctggctgccgctgatgcaggcacggctggagccgctgtactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atccttcagccctggaaggatgtgttcactcctggctcatgggaggctttcatggtcaaa
aacatcgtgcctaaactcggaatgtgtctgaatgagctcatcatcaaccctcaccagcag
cacatggatgccttttactgggtgatcgactgggaggggatgatttctgtctccagtctt
gttgggctgctggagaaacacttcttcccaaagtggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcacatccctccatcaaagacaagttcaatgaggctcttgacatc
atgaaccgggctgtgtcctccagcgtgggtgggtacatgcagccgggcgcccgggagaac
atcgcgtacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcccagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
atcatcgggaagcggcacgaggggaagcacctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtgttcgtgcaaggggagaagacctgggtgcccacctcgctgcag
agcctcatcgacatggccaagtga
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