Aphelocoma coerulescens (scrub jay): 138119517
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Entry
138119517 CDS
T10543
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04010
MAPK signaling pathway
acoe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138119517 (CACNA1B)
04020 Calcium signaling pathway
138119517 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138119517 (CACNA1B)
Ion channels [BR:
acoe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
138119517 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
138119517
NCBI-ProteinID:
XP_068887557
LinkDB
All DBs
Position
17:1887276..2153168
Genome browser
AA seq
2319 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAIKKSKNDLI
HAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVL
CVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVM
YHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEAT
NQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYN
ELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRSEGRNNITKLSPVDVQEVVEHPKVTSA
DGAEAPRKHHRHRDKEKLGEQEKGDVTKDEGGETGAGNKEERHRQHRSRSKEVEGGSKEG
KSDRNRGQEGGKRHHRRGSVEDGAEKEHRRHRSHRHSSDRPGKEGNGTANGARGERRSRH
RGGSRSGNRDGEPGAKGDNGEEPHRRHRLRNRALSAYESVEKDNGEKEGEAGEKEHRNHQ
PKENQCELEASGSGSVPGSVPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTV
NIPVTITAPPGDTTVIPMNNVEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIR
RLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVI
KMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLK
TIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEK
DCRGQYLDYEKNEVEAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYE
EQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACI
DFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYE
EMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADNFI
NLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFG
NIALDDETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKKECG
SDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAA
CGRISYTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIR
TALEIKLASGGVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMI
FDFYKQNKNSREQVQPPGGLCQPGPVSLFHPLKATLEQTQPAAFSNAKAFLRQKSSASLN
NGGALPPPEGGIKESSSWGTQCTQDVFYETRSPAFERGHSEEIPIERVVEMKEISPTVAN
GEPQPGLESQGRAASMPRLAAETQPIPDTSPMKRSVSTLTPQRPHAMHLYEYSLERMPPE
QGHHHHHHRCHRRKEKKQKSLDRAAHHLADGQAVAQSGESSSKDKKQERGRSQERKQHSS
SSSEKQRFYSCDRYGSRDRAQPKSADQSRPTSPSGGPEHGPHRQGSGSVNGSPLLSTSGA
STPCRGRRQLPQTPLTPRPSITYKTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALLRGE
QPPPPPTVARIGSDPYLGHHDAAADSPQRAAPEDTLTFEEAVATNSGRSSRTSYVSSLTS
QSHQIRRVPNGYHYTLGLNTGPGARGRSYYHEADEDDWC
NT seq
6960 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccagaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtatcgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agattggacgacactgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgttttccacaaaggctcttacctgcggaacggctggaacgtg
atggattttgtcgtggtcctcacagggattctggcgactgctgggactgattttgacctg
cggaccctgcgagccgtgcgggtgctgcggcccctgaaactcgtgtcaggaatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccttgctgcagattgggctg
ctcctcttcttcgccatcgtgatgtttgccatcatcgggctggagttctacatgggcaaa
ttccataaaacctgcttttccaacgagacaggtgaggaggtgggagattttccctgtgga
gaggagcctcctgccaggcagtgtgagagcgggaccacgtgcagggagtactggcagggc
cccaactacggcatcaccaactttgacaacatcctcttcgccgtgctcacggtcttccag
tgcatcaccatggagggctggactgacatcctctacaatacaaatgacgctgcaggaaat
acctggaattggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaatttgccaaagaacgagagagggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcagatcgagcgggagctcaacgggtacctg
gagtggatcttcaaagcagaggaggtcatgctggccgaggaggacaagaacgcggaggag
aagtcccctctggacgtgttgaaaagagccgcaataaagaagagcaaaaacgacctgatt
catgcagaagaaggtgaggaccatttcacagacatttgctccgttgggtctcccttcgcc
cgtgccagtttgaagagcggcaagaacgagagctcgtcctacttcaggaggaaggagaag
atgttccgcttcttcatccggcgcatggtgaaggctcagagcttctactgggtcgtgctc
tgcgtggtggctctcaacaccctctgtgtggccatggtgcactatgaccagcccgagaag
ctcaccacagctctctattttgcagagtttgtttttctggggctgttcctcaccgagatg
tctctgaagatgtacggcctggggccaaggaactacttccactcttcattcaactgcttc
gactttggggtcatcgtgggcagcatttttgaggtcatttgggctgcagtgaagccggga
acctcctttggcatcagcgtcctgagagccctgcgcctgctgaggattttcaaagtgaca
aagtactggaattccctgaggaatctggtggtctccttgctgaactccatgaaatccatc
atcagtttgcttttcctgctcttcctgttcatcgtggtcttcgctctgctggggatgcag
ctctttggaggacagttcaatttccaagatgaaactccaaccaccaatttcgataccttc
cctgctgccatcctcacagtcttccagatcctgacgggggaagactggaacgctgtgatg
taccacgggatcgagtcgcagggcggtgtccactcgggaatgttctcctccatctacttc
atcgtcctcaccctgtttggtaactatactctgctgaacgtcttcttggccatcgctgtc
gacaacctggccaacgcccaggagctgaccaaggacgaggaggagatggaggaagccacc
aaccaaaagctggccctgcagaaggccaaggaagtggccgaagtgagccccatgtctgcg
gccaacatttccatagctgccaagcagcagaattcctccaaatccaagtcggtttgggag
cagaggacgagccagatccggatgcacaacttccgagccagctgcgaggccctgtacaac
gagctggaccccgaggagcgggtgcgctacgccaccaccctgcacatccggcccgacatg
aaaacccacctggaccggccgctggtcgtggagccccgcagcgaaggcaggaacaacatc
accaagctgagccccgtggatgtccaggaggtggtggagcaccccaaagtcacctcagct
gacggggcagaagcgccacggaagcaccaccggcatcgggataaggagaagctgggagag
caggagaaaggggacgtgaccaaggatgagggcggcgaaaccggcgcgggcaacaaggag
gagcggcacaggcagcaccggagccgcagcaaggaggtggaagggggcagcaaggaaggg
aaaagcgaccggaacagggggcaggaaggggggaagaggcaccaccggcggggctcggtg
gaggacggcgccgagaaggagcaccgcaggcaccgcagccaccggcactcgtccgaccgg
ccgggcaaggagggcaacggcaccgccaacggtgcccgcggcgagcggcgctcccggcac
cgcggcggctcccggtccgggaacagggatggagagcccggggccaagggcgacaacgga
gaggagccccaccggcggcaccggctcaggaacagggcgctgtccgcgtacgagtccgtg
gagaaggacaacggcgagaaggagggcgaggctggcgagaaggagcaccgcaatcaccag
cccaaggagaaccagtgtgagctggaggccagtggcagtgggagtgtccctgggagtgtc
cctgtgcacaccctgcccagcacatacctgcagaaggtgcccgagcagccggaggatgcc
gacaaccagaagaacgtgacgaggatgattcagcccccgctggacaaaaccaccactgtg
aacatccctgtcaccatcacggcccctccaggggacaccactgtcattccaatgaacaat
gtggagtttgaaagcaaaacagaggagaagaaagacgtcgatgacttgacgaaaaatggg
cctaaaccgatcctgccttacagttccatgtttatcctcagtcccacaaatccgatccgg
cgcctgttccactacatcgtcaacctgcgctactttgagatggtgatcctgatcgtcatc
gccctcagcagcatcgccctggctgcagaggaccctgtccaagctgagtctcccaggaat
gacgctctgaaatacctggattatatattcacaggagtcttcacctttgagatggtgatc
aagatgatcgacttggggctgctgctccaccccggctcctacttccgtgacctgtggaat
atcctggacttcattgtggtcagtggggccttggtggcttttgccttctcaggaaccaaa
ggcaaggacatcaacaccatcaagtccctgcgagtcctgcgggtgctccggcctctgaag
accataaaacggctgccaaagctaaaggccgtctttgactgcgtggtgaactccctgaag
aacgtcctcaacatcctcatcgtgtacatgctcttcatgttcatcttcgccgtcatcgcc
gtgcagctcttcaagggccgcttcttctactgcacagacgagtccaaggagctggagaag
gactgcaggggtcagtacctggattatgaaaaaaatgaggtggaggcacagcccagggaa
tggaaaaaatacgagttccactacgacaacgtgctctgggctctgctcacgctcttcacc
gtgtccacaggggaagggtggccaactgtgctgaagcactcagtggatgccacctacgag
gaacaggggcccagccctggctaccggatggaaatgtccatcttttacgtggtgtatttt
gttgtcttcccttttttctttgtcaacatctttgtggcgttaatcatcatcaccttccag
gagcaaggagataaagtgatgtcagagtgcagcctcgagaaaaacgagagggcctgcata
gactttgccataagtgccaagcccctgacccgctacatgcctcagaacaagcaatccttc
cagtacaagatgtggaaattcgtggtgtcccctccctttgagtattttattatggtcatg
atcgctctcaacaccatcgtcctcatgatgaagttctatgatgctccagaagcatacgag
gaaatgctgaaatgcctgaacattgtgtttacatccatgttttccatggaatgtgtgctg
aagatcattgcctttggtgtgctgaattatttccgagatgcctggaatgtctttgatttt
gtaacagtgttgggaagtattactgatattttagtaacagagattgcggacaacttcatc
aacctcagcttcctgaggctcttccgggcagccaggctcatcaagctcctccgccagggc
tacaccatccgcatcctgctctggacattcgtgcagtccttcaaggccttgccttatgtg
tgtctcctcattgcaatgctcttcttcatctatgccattattggcatgcaggtgtttggg
aacattgccttagatgatgaaacctccattaatcggcacaacaacttccggaccttcctc
caagccctgatgctcctgttcaggagtgccacgggggaagcctggcacgagatcatgttg
tcctgcttgagcaacagagcctgtgaccccctctctggcctcaccaaaaaggagtgtggc
agtgattttgcctatttctacttcgtgtccttcatcttcctctgctccttcctgatgctg
aacctgttcgtggctgtgatcatggacaatttcgagtacctgaccagggactcctccatc
ctcgggccccatcacctggacgagtttgtccgggtgtgggctgagtacgaccccgcagcc
tgcgggcgcatcagttacacagatatgtacgagatgctgagacacatgtccccacctcta
ggccttgggaagaaatgcccagctcgtgttgcctataagcgcctggtgaggatgaacatg
cccatctctcctgaggatttaaccgtgcacttcacctccacgctgatggccctgatccgc
actgccctggagatcaaactggcctcaggcggggtgaagcagcaccagtgcgatgccgag
ctgaggaaggagatttcgctggtttggcccaacctgtcccagaaaactctggatttgctg
gtgcctcctcacaaacctgatgaaatgactgtggggaaggtctacgcagccctgatgata
tttgacttctacaagcagaataagaacagcagggagcaagtccagccccctgggggcctg
tgccagcccgggccagtgtccctcttccaccccttgaaggccaccctggagcagacccag
cccgcggccttcagcaacgccaaggccttcctgcggcagaagagctcggcctccctcaac
aacgggggagccttgccacccccggagggagggatcaaagagtccagttcttgggggacc
cagtgcacccaggacgtgttttatgaaaccaggagcccagcttttgagcgaggccactcc
gaggagatccccattgagagggtggtggaaatgaaggagatcagccccacagttgccaac
ggagagccccaaccaggcctggagagccagggccgggcagcctccatgccacgcctggct
gctgaaacccagcccatcccggacacgagccccatgaagcgctcggtctccacgctgacc
cctcagcgccctcacgccatgcacctctacgagtattccctggagcggatgcctccggag
caaggccaccaccaccaccaccaccgctgccaccggcggaaagagaagaagcagaaatcc
ttggatagggccgcccatcacttggctgatggacaagctgtagcccagtctggagagtct
tcttccaaggacaagaagcaggagcgtggccgctcccaggagaggaagcagcactcctcc
tcctcgtccgaaaagcagcgcttctactcctgcgaccgctacggcagccgggaccgtgcc
cagcccaaatctgctgaccagagcaggcccacttcccccagcgggggcccggagcacggc
ccgcacagacagggcagtggttcagttaatgggagccccttgctgtcgacatctggtgct
agtaccccctgccggggtcggaggcagctcccacagactccactgaccccacgccccagc
atcacttacaagaccgctaactcctcgcccgtgcacttcaccactttccaaacccccacg
ttctccccgggccgcctgagccgcgggctgtccgagcacaacgcgctgctgcggggggag
cagccgccgcccccgcccaccgtggcccgcatcggctccgacccctacctgggccaccac
gacgccgccgccgacagcccccagcgcgccgcgcccgaggacacgctcaccttcgaggag
gccgtggccaccaactcgggccgctcctcaaggacttcctacgtctcctccctgacctcg
cagtcgcaccaaatccgccgggtgcccaacgggtaccactacacgctggggctcaacacg
ggccccggcgcccgaggacgcagttactaccacgaagccgatgaggatgactggtgctag
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integrated database retrieval system
