Aphelocoma coerulescens (scrub jay): 138119534
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Entry
138119534 CDS
T10543
Symbol
LRSAM1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138119534 (LRSAM1)
04121 Ubiquitin system [BR:
acoe04121
]
138119534 (LRSAM1)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138119534 (LRSAM1)
Membrane trafficking [BR:
acoe04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
138119534 (LRSAM1)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138119534 (LRSAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
zf-C3HC4_3
LRR_14
SAM_1
LRR_4
SAM_2
Prok-RING_4
AftA_C
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
138119534
NCBI-ProteinID:
XP_068887599
LinkDB
All DBs
Position
17:complement(1261296..1282542)
Genome browser
AA seq
725 aa
AA seq
DB search
MPLFSRKKKPSDDARKRLEYQMCLAKEAGADDTLDISKCELSEVPYGAFATCKVLQKKVL
IIHTNNLTSLVPKSCSLLSLITVKVLDLHDNQLASLPADIGQLAALQVLNLERNLLKSLP
QSIGDLTQLQVLNVKGNKLRELPGSMSGLRSLRALDVSGNVLQELPRVLAHIRTLQTLTL
DASSMTYPSPEICSAGTEAIQQFLCKECGIAYYPPSQYLLPTLESDGGGTSVDGVDRTVE
KYLEEESKWQNKFLDYEKRKEKKKQEKLEFERRLNVGQREQALLVQQLNSHKDEILQTVR
EEQQRLEQGLSKHQRYLEEERLKLLQQLKDTEQGIASRIQKLLDDNQRQKQSSDILKSLE
NERIRMEQLMAITQEEMEQLRRREVASAMQQMLAETYKNKLLQMTSESRRQDLVSQACSS
LAEMDQKFQQIQAWQQLDQNKAVSQILQQIEMQKVAFEALQVKKDLMHRQIRNQIKLIET
ELLQLTQLELKRQELDTETLQEAVMEQRRALSCLLQQLLKEKKQREEELQQILLEMEAKS
ETKQENYWLIQYQRLLNQKPLSLKLQEKGLEQQLVNLLLELSADQYVPIFAHHRISLEML
GTMSASDLEKLGVTEAGLQHAILRRAQEILAVAATIPELRREEDTEVPAAPEPSAPPEEP
AGPTAPPLPWDERKSECVVCMEQEPQTIFLPCGHVCCCQRCCERLHSCPLCRRDIAQRIR
IFQSA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttctccaggaagaagaaacccagtgatgatgcccggaagcgccttgagtac
cagatgtgcctggcaaaagaagctggtgctgatgacacccttgacatatccaaatgtgag
ctctctgaggttccttatggggcctttgcaacttgcaaggtcttgcaaaaaaaggtgctg
attattcatacaaataatctgacatctttagttccaaagtcctgcagcctcctgagtctc
ataactgtgaaggttctagacctgcatgacaaccagctggcatcgcttcctgctgatatt
ggtcagctggcagctctccaggtcctaaaccttgaaaggaatcttttaaaaagccttcca
caatctataggagacctcacccagctccaagtcctcaatgtgaaagggaacaagctgagg
gaactgcccgggagcatgagcggcctgcggagcctgcgggctctggatgtcagtgggaac
gtgctgcaggagctgccgcgggtgctggcccacatccgcaccctgcagacgctgaccctg
gatgcctcttccatgacctacccatcccctgagatctgcagtgcgggtacagaggccatc
cagcaattcctctgcaaggagtgtggaattgcatactaccctccctcacagtacctgctc
cccacgctggagagcgatggaggaggaacttcagtggatggggtggacaggacagtggag
aagtacctggaggaggagagcaagtggcagaacaaattcttggattatgagaagaggaag
gaaaaaaaaaagcaggagaagctggaatttgagcggcgcctgaatgtggggcagcgagaa
caggccctgctcgtgcagcagctcaacagccacaaggatgagatcctgcagacagtgaga
gaggagcagcagaggctggagcagggtctgtcgaagcaccagcgctatttggaggaggag
aggctgaagctgctgcagcagctgaaggacacagagcagggcattgccagccggatccag
aagctgctggacgacaaccagaggcaaaaacaaagttcagacattttgaagtccttggag
aatgagagaatcaggatggaacagctgatggcaataacccaggaggagatggagcagctg
cgcaggcgggaagtggcctctgccatgcagcagatgctggctgagacctacaagaacaag
ctcctccaaatgacctctgagtctcgtcggcaggacctcgtcagccaggcctgctccagc
ctagctgagatggatcagaagttccagcagatccaggcttggcagcagctggatcagaac
aaagctgtcagtcagatcttgcagcagattgagatgcagaaagttgcctttgaagctctc
caggtgaagaaggatcttatgcacaggcagatcaggaaccagattaaattaatagaaaca
gagttattgcagctgacacagctggagttaaagaggcaagaactggacacagagacgctg
caggaggccgtcatggagcagcgccgggcgctcagctgcctcctgcagcagctgctcaag
gagaagaagcaaagggaggaagaactgcaacaaatcctgctggaaatggaggcaaagagt
gaaaccaaacaggagaactactggctgatccagtaccagcgtctgctgaaccagaagccc
ctctccctgaaactccaggagaagggtttggagcagcagctggtgaacctcctgctcgag
ctctctgctgaccagtacgtgccaatcttcgctcaccaccgaatatccttggaaatgctc
ggcaccatgagtgccagtgacctggaaaagctcggtgtgacagaggctggtctgcagcat
gccatcctcaggcgggctcaggagatcctggctgtggccgcgaccatcccagagctgcgg
agggaggaggacaccgaagtccctgcggccccagagcccagcgctcccccggaggagccc
gcgggccccacggcccctccgctgccgtgggacgagaggaagtcggagtgcgttgtgtgc
atggagcaggagccccagacgattttcctgccctgtggccacgtctgctgctgccagcgc
tgctgcgagcggctgcactcgtgtcccctgtgccgccgggacatcgcccagcgcatccgc
atcttccagagcgcctag
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