Aphelocoma coerulescens (scrub jay): 138119544
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Entry
138119544 CDS
T10543
Symbol
LRRC8A
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138119544 (LRRC8A)
Ion channels [BR:
acoe04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
138119544 (LRRC8A)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_R13L1-DRL21
LRR_1
LRR_9
LRR_At5g56370
Sp-CxC
LRR_EndoS
BPD_transp_2
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
138119544
NCBI-ProteinID:
XP_068887625
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Position
17:5508020..5525244
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AA seq
810 aa
AA seq
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MIPVTELRYFADTQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
TKDSCNDSVRGWTAAAPERTYYNTSLVPSADSGPTGIRYDLDRHQYNYVDAVCYENRLHW
FAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEE
SDTKPAFGKMNGSMDKKSSTVSEDVEATVPMLQRTKSRIEQGIVDRSETGVLDKKEGEQA
KALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFILIICYTVYYVNNITFDVDCKVDIE
SLTGYRMYRCAHPLATLFKILASFYISLVIFYGLICMYTLWWMLRRSLKKYSFESIREES
SYSDIPDVKNDFAFMLHLIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRI
TKNSQDKLELHLFMLSGIPDTVFDLIELEVLKLELIPDVTIPPSIAQLTSLKELWLYHTA
AKIEAPALAFLRENLKSLHIKFTDIKEIPLWIYSLKTLEELHLTGNLSAENNRYIVIDGL
RELKRLKVLRMKSNLTKLPQVVTDVGVHLQKLSINNEGTKLIVLNSLKKMVNLTELELIR
CDLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPMQIGN
LTNLERLYLNRNKIEKIPTQLFYCRKLRYLDLSHNNLTFIPPDVGLLQNLQNLAVTANRI
ESLPPELFQCRKLRTLNLGNNVLQSLPSRVGELTNLSQIELRGNRLECLPVELGECPLLK
RSGLVVEEDLFNTLPLEVKERLWRADKEQA
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtcactgagctgcgctactttgctgatactcagccagcctatcgcatcctg
aagccgtggtgggacgtcttcacggattacatttccatagtgatgctgatgatcgccgtg
ttcggaggaacgcttcaggtcacccaggacaaaatgatttgtttgccctgtaaatgggtt
accaaagactcttgcaatgactctgtcaggggatggacagcggcagccccggagcgtacc
tactacaacactagtctcgttccctctgctgattccgggcctacagggatccgatatgat
ctggaccggcaccagtacaactacgtggatgcggtgtgttacgagaaccgtcttcactgg
tttgccaagtattttccttatctagtgctgctacataccctcatatttctggcttgtagc
aacttctggttcaagttcccaaggaccagctccaagctagagcattttgtgtctattttg
ctcaagtgttttgactctccatggacaacgagagcattgtctgagacagtggtggaagag
agtgataccaaaccagcatttggaaaaatgaatggctccatggacaagaaatcctccacg
gtcagtgaggatgtggaagccactgttcccatgctgcagagaacaaagtctcgaattgag
caagggattgtggacaggtctgagactggtgtcttggacaaaaaggaaggtgagcaggcc
aaagcactctttgagaaagtgaaaaagtttcgtactcatgtggaagagggagacatagtt
tatcgcctgtacatgagacagaccataatcaaagtaatcaagttcattctcatcatatgc
tatactgtgtactatgtcaacaacataacatttgatgtggactgtaaagtggacattgag
agcttgactggctacagaatgtaccgctgtgctcatcctttggccactctcttcaaaatc
ttggcttctttctacatcagtctggtgattttctatggtttgatctgcatgtacacactg
tggtggatgttgaggcggtcactcaagaaatactcctttgagtccatccgggaggagagc
agttacagtgacattcctgatgtgaaaaatgactttgcttttatgctccatctgatcgat
cagtacgaccccctctactccaagcgctttgctgtctttctgtcagaggtgagtgagaac
aaattgcggcagctgaacctcaacaatgagtggactttggagaaactacgccagaggatc
accaaaaactctcaggataagctggaattgcatcttttcatgttgagtggcattcctgac
acagtatttgacctcattgagttggaggtcttgaagctggagcttatccctgatgtcact
attccccccagcattgcccagctcaccagccttaaggaactgtggctctaccacacagct
gccaaaattgaggccccagcccttgccttcttgagggagaatttgaaatctctccacatc
aagttcacagacattaaggagattcctctttggatttatagcctgaagacactagaggag
cttcacctgacagggaatttgagcgctgaaaacaaccggtacattgtgatagatggcctg
agggagctgaagaggctgaaggtgttgaggatgaagagtaacctcaccaagctgccacag
gtggtgacagatgttggtgtgcatcttcagaagctttccatcaacaatgagggcaccaag
ctcattgtcctcaacagccttaagaagatggtcaacctgacagagcttgagctgatccgg
tgtgacttggaacgcattcctcactctatctttagcctccacaatctgcaggaaatagac
ctgaaggacaacaacctaaagaccattgaggaaatcatcagcttccagcacttacatcgt
ctcacttgccttaaattgtggtacaaccacattgcctacatccccatgcagataggcaac
ctgaccaacttagaacgcctttacctgaaccgtaacaagatagaaaagatccctacccag
ctcttctattgccgaaaacttcggtacttggatctcagccacaacaacttaactttcata
ccaccagatgttggacttcttcaaaacctgcagaatctggctgtgacagccaacaggatt
gaaagtctcccaccagagctgttccaatgcaggaagctgagaaccttgaacctgggaaac
aacgtgctgcagtcgctgccctcccgggtgggagagctgacgaatctgtcacagatcgag
ctgcgagggaaccgcctggagtgcctgcctgtggagctgggagagtgcccgctgctgaaa
cgcagcgggctcgtggtggaggaggacctgttcaacaccctgcccttggaagtcaaagag
cgcctgtggagggcagacaaagagcaagcttga
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