Aphelocoma coerulescens (scrub jay): 138119553
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Entry
138119553 CDS
T10543
Symbol
SPTAN1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04210
Apoptosis
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
138119553 (SPTAN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138119553 (SPTAN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acoe04812
]
138119553 (SPTAN1)
Cytoskeleton proteins [BR:
acoe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138119553 (SPTAN1)
Intermediate filaments
Intermediate filament-binding proteins
138119553 (SPTAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
138119553
NCBI-ProteinID:
XP_068887648
LinkDB
All DBs
Position
17:5351070..5397274
Genome browser
AA seq
2528 aa
AA seq
DB search
MLSSFRKIKVQKMDPSGVKVLETAEDIQERRQQVLDRYHRFKELSSLRRQKLEDSYRFQF
FQRDADELEKWIQEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANSGAIIKLDETGNQ
MINEGHFASETIRSFTPYRTAQRPIVTATQVGSHIRTRLQELHRLWELLMEKMREKGVKL
LQAQKLVQYLRECEDVLDWINDKEAIVTSEELGQDLEHVEVLQKKFEEFQTDLAAHEERV
NEVNQFAGKLIQEQHPEEELIKSKQDEVNASWQRLKGLALQRQGKLFGAAEVQRFNRDVD
ETISWIKEKGQLMASDDFGRDLASVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSH
PINASQIQVKREELIANWEQIRTLAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALIN
ADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSADESGQALLSAGHYASDEVKEKLTIL
SDERSALLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEAL
LKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAMDDVATRRDALLSRRNALHERAMYR
RAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQ
SRIDALEKAGQKLIDVKHYASDEVAARMNEVISLWKRLLEATELKGIKLREANQQQQFNR
NVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQ
EAGHFDADNIKKKQEALVARYEALKDPMVARKQKLADSLRLQQLFRDIEDEETWIREKEP
IAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKIKL
NELNQKWDSLKAKASQRRQDLEDSLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSA
EALLKKHEALMSDLSAYGSSIQALREQAQSCRQQVAPTDDETGKELVLALYDYQEKSPRE
VTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSIALR
QEQIDNQTLITKEVGSVSLRMKQVEELYHSLLELGEKRKGMLEKSCKKFMLFREANELQQ
WINEKEAALTSEEVGADLEQVEVLQKKFDDFQKDLKANESRLKDINKVAKDLESEGLMAD
EVQAVQQQEVYGMMPRDETDSKTASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEER
SQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAAL
GDKVNSLGETAQRLIQSHPESAEDLQEKCTELNQAWNSLGKRADQRKEKLGDSHDLQRFL
SDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQL
LAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAARE
AFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAVLQSFADQLIAADHYAKGVIANR
RNEVLDRWLRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNI
QSKHQKHQAFEAELHANADRIRGVIDMGNSLIERGACAGSEDAVKARLAALADQWQFLVQ
KSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEA
DISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKGMASARRAKLNESHR
LHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLD
TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW
INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHEA
NITAKMKGLRGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYG
RDLSSVQTLLTKQETFDAGLQAFQQEGIANITALKDQLLAAKHIQSKAIEARHASLMKRW
NQLLANSATRKKKLLEAQEHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEE
IKALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEETWRNLQKI
IKERELELQKEQRRQEENDKLRQEFAQHANAFHQWIQETRTYLLDGIAYRRVIRVYQYEV
GDDLSGRSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTE
HSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLN
HQEFKSCLRSLGYDLPMVEEGEPDPEFESILDTVDPNRDGHVSLQEYMAFMISRETENVK
SSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCISHMKPYMDGKGRELPSAYDYIE
FTRSLFVN
NT seq
7587 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcatcgtttcgtaaaatcaaagtccagaaaatggatccaagcggtgtaaaagtg
ttggaaacagcagaagatatccaagaaaggcgtcagcaagttttggaccgttaccacagg
ttcaaggaactctcttctctgaggcgccaaaaacttgaagattcctatcgattccagttt
ttccagcgtgatgcagatgagcttgaaaaatggatccaagagaaactgcagattgcatct
gatgaaaattacaaagatccaagcaatttgcaggggaagctgcagaagcaccaagccttt
gaagctgaagtgcaggccaattcaggagccatcattaaactggatgagactggaaatcag
atgataaatgaaggccattttgcatctgaaaccataagatccttcacgccgtaccggact
gctcagcgcccgatagtcacggccacccaagtggggtcccacatacgaactcgactgcag
gagctgcaccgactatgggaattactgatggaaaagatgagagagaagggagtcaaatta
ttgcaagcacagaagttggtgcaatatttacgggaatgtgaagatgtcttggactggatc
aatgataaggaagcaatagtgacctcagaagagcttggacaggacttggagcatgttgaa
gttttgcaaaagaagtttgaagagttccagacagaccttgcagctcatgaagaaagagta
aatgaagtgaaccaatttgctggcaaacttatccaggaacaacaccctgaagaggaactg
ataaagtccaaacaggatgaagtaaatgcaagctggcagcgtcttaagggacttgccctt
cagaggcaaggaaagctctttggggcagctgaagttcagcgtttcaacagggatgtggat
gaaacaatcagctggattaaggagaaagggcagttgatggcctcagatgattttggcaga
gacttagccagtgtgcaggcattactgcgcaagcacgaaggcctggaaagagacctggca
gctctggaagataaggtgaaggccctgtgtgcagaagctgaccgtttgcagcagtctcac
ccaataaatgcttcccaaattcaagtgaaacgggaggagctcattgccaactgggaacag
atccggacgctggcagcggagaggcatgctcgtctcaacgactcctacaggctgcagcgc
tttctcgcagacttccgagacctcaccagctgggtgactgagatgaaggctctgataaat
gctgatgaacttgccaatgatgtggctggggcagaagctcttctagacagacatcaggaa
cataagggagaaattgatgcccatgaagacagcttcaaatctgctgatgagtcaggccag
gctttgctctctgctgggcactacgcttctgatgaagttaaagaaaagctgaccatcctc
tcagatgaaaggtctgccttgctggaactgtgggagctccgcagacagcagtatgagcag
tgcatggacctgcagcttttctacagagatactgaacaagttgacaactggatgagcaaa
caagaggcatttctgctgaatgaagatcttggtgattctctggacagtgtggaggctctt
ctgaagaagcatgaagactttgagaaatccctaagtgcccaagaggagaaaatcacagca
ttagatgagtttgctactaagttgattcagaataaccactatgccatggatgatgttgct
acacgcagagatgctctactaagccgccgaaatgcccttcatgaaagagccatgtaccgc
cgtgctcagctagcagattccttccatctgcagcagtttttccgagattctgatgagctc
aagagttgggttaatgaaaagatgaaaactgcaactgatgaggcctacaaggatccatca
aacttgcaaggtaaagttcagaaacaccaggcttttgaagcagagctgtctgctaaccag
agtcgtattgatgccctggagaaagctggccagaagctgattgatgtcaagcactatgca
tcagatgaggtggcagctcgcatgaatgaagtcatcagcttgtggaagaggcttctggag
gccactgagctcaaaggtataaaactgcgagaagccaatcagcagcagcagtttaatcgc
aatgtggaggacattgagctctggctgtatgaagtagaaggacacttagcttctgatgat
tatggaaaagatcttactaatgttcagaatcttcagaagaaacacgccctgctagaggca
gatgttgctgcccatcaggatcggatagatggcattaccatccaggcacgccagttccaa
gaggccgggcactttgatgctgacaatatcaagaagaaacaagaagctttagtggctcgc
tatgaagctctgaaggaccccatggtagctcgcaagcagaaactcgcagattctcttcgc
ctgcagcagcttttccgtgacattgaggatgaagagacctggattagggaaaaagaacct
attgcagcttcaacaaaccgaggcaaggacttaattggtgtccagaatctgctaaagaag
caccaggctttgcaggcagaaattgcaggccatgagcctcgcattaaagcagtcacacag
aaggggaatgctatggtggaagaaggacactttgcagctgaagatgtgaaaatcaaactg
aacgagctaaaccagaagtgggactctctgaaagccaaagcatctcagcgtcgacaggat
ctggaggattccctgcaggctcagcagtactttgctgatgctaatgaggccgaatcctgg
atgagggaaaaggagcccattgtaggcagtacagactatgggaaagatgaagactctgct
gaggctcttctgaagaaacatgaagctttgatgtccgatctctccgcttacggcagcagc
atccaggcattaagggaacaggcccagtcgtgcaggcaacaagttgctcccacagacgat
gaaactggaaaagagctcgttctggctctctatgattaccaggagaagagtccccgggag
gtgacaatgaagaagggagatatcctcaccttactcaacagcaccaacaaggactggtgg
aaggtggaagtcaatgaccgtcagggatttgtaccagctgcctatgtgaaaaaactggat
cctgcccagtctgcatctcgagagaacctcctggaggagcaaggcagcatagcactgcga
caggagcaaatcgacaaccagactctcataactaaggaggtcggcagtgtatctctgcgt
atgaaacaggtcgaagaactatatcactctctcctggaactgggagaaaaacgtaaaggc
atgttggaaaaaagctgcaagaagttcatgcttttccgtgaagccaacgagctccagcag
tggatcaatgagaaggaagcagcactcaccagtgaggaagtgggtgctgatctggagcag
gtggaggtgctgcagaagaaatttgatgattttcagaaggatctgaaagccaacgagtca
cgcctgaaggacataaacaaggttgcaaaggacctggagtcggaagggctgatggcagat
gaagtacaagcagtacagcaacaggaagtctatgggatgatgcccagggatgaaactgat
tctaagacagcgtctccttggaagtctgcacgtttgatggtacacactgtggcaaccttc
aactcaatcaaggagctgaatgagcgctggagatccctgcagcagctggcagaagagagg
agccagttgttgggcagtgcccacgaggtccagagattccacagagatgctgatgaaact
aaagaatggatagaggagaagaatcaagcattaaatacagacaactatgggcatgacctg
gccagtgttcaggctctgcagcgcaaacatgaaggctttgagagagacttggcagctctg
ggagacaaggtgaattctcttggtgaaactgcccagcgtctgatccagtcacatccagaa
tctgctgaagatctccaagaaaaatgcactgagttgaatcaggcttggaatagtctggga
aaacgtgctgaccagcgcaaagagaagcttggagattctcatgacctgcagcgtttcctc
agtgacttcagggacctcatgtcttggatcaatggaatccggggtctggtctcctcagat
gaactcgcaaaggatgtgactggagctgaggctctattggaaaggcaccaggaacaccgc
acagaaatagatgcaagggctggcactttccaggcatttgaacagtttggacaacaactt
ctagcccatggacactatgctagcccagagatcaaggagaaactggatattctggaccaa
gaacggacagacctggagaaggcctgggtccagcgcagaatgatgctggaccagtgcctg
gaactacagctgtttcatcgggactgtgaacaagctgaaaactggatggctgcccgggag
gctttcctaaatacagaggataaaggagactccttagacagtgtggaggcactcatcaag
aaacatgaagattttgataaagcaatcaatgtccaggaagagaaaattgctgtcctgcag
tcctttgctgaccagctgattgctgcagatcattacgccaagggagtcatcgccaacaga
cgcaacgaggtcctggacaggtggcttcgtctgaaagcccaaatgattgagaagagatcg
aagctgggagagtctcagaccctccagcagttcagtcgtgatgtggatgaaatagaagcc
tggatcagtgaaaagctccagactgcaagtgatgagtcatataaggatcccacaaatatc
cagagcaaacaccagaagcaccaggcctttgaagccgagctccacgccaacgctgaccgc
atccgtggcgtcattgacatgggcaactccctcatcgagaggggcgcgtgtgctggcagc
gaggacgccgtcaaggcacgcctggctgccctggctgaccagtggcaattcctggtacag
aaatcagcagagaagagtcagaaactgaaagaagctaataagcaacagaatttcaatact
ggaatcaaggactttgacttctggctttcagaggtggaggctttgttggcatctgaagac
tatgggaaggacttggcatctgttaacaaccttttgaagaaacaccagttactggaagct
gatatatctgctcatgaggaccgcctgaaggacctgaacagccaggctgacagtctgatg
accagcagtgcctttgacacatcccaagtgaaagacaaacgtgagaccatcaatgggcgc
ttccagcgcatcaagggcatggccagcgcccgccgtgccaagctcaacgagagccaccgc
ctgcaccagttcttccgtgacatggacgacgaggagtcctggatcaaagagaagaaactg
ttggttagctcagaggactatggcagagacctgactggtgtgcagaatctgaggaaaaaa
cacaagcgcttagaagcagaattggctgcccacgaacctgctatccagggcgttctggac
acggggaagaagctttcagatgacaacacaattggaaaggaggagatacagcagagactg
gctcagtttgtggatcactggaaagagttaaaacagttggcagctgctaggggtcagcgt
ctggaggagtctctggagtatcagcagtttgtagcaaatgttgaggaagaagaagcctgg
atcaatgagaaaatgacactggtagccagcgaggattatggggacacacttgctgctatc
cagggcttgctgaagaagcacgaggcattcgagactgattttactgtccacaaggacaga
gtgaacgatgtctgtgctaatggagaggatctcattaaaaagaacaatcaccatgaggcg
aacatcactgccaagatgaaggggctcagaggcaaggtgtcagatctggagaaagcagca
gctcagaggaaagccaaattggatgagaactcagccttcctccagttcaactggaaagca
gatgtggtggagtcatggataggggagaaggaaaacagtctgaagacagatgattatgga
cgtgacctctcttcagtgcaaaccttgctcactaaacaggaaacgtttgatgctggactt
caggctttccagcaggagggaattgcaaacatcactgctctgaaagaccagctgctcgca
gccaagcacatccagtccaaggccattgaggcccggcatgcttctttgatgaaacgctgg
aatcagctactggctaattctgctaccaggaaaaagaaactcttggaggctcaggagcac
ttcagaaaggttgaggatctgttcctgacttttgcaaagaaggcctctgccttcaacagt
tggtttgagaatgctgaggaggacctgacggatcctgtgcgctgcaactcactggaagag
atcaaagccctgagagaagctcacgacgctttccgttcctccctaagttctgcccaagct
gatttcaaccagctggcagagctcgatcgccagatcaagagtttccgtgtggcctccaac
ccctacacttggttcactatggaggctcttgaagaaacctggaggaatctgcagaaaatt
atcaaggaacgtgaactggagctgcagaaggaacagcgaaggcaggaagaaaacgacaaa
ctacgtcaggaatttgctcagcatgccaatgccttccatcagtggattcaggagaccagg
acttacctactagatggcatagcatatcgtcgtgtcattcgtgtctatcagtatgaagtt
ggggatgatctatctggaagatcatgtatggtggaggaatcgggaacgttggagtcacag
ctggaagctactaaacgcaagcaccaagagatccgagctatgaggagccagctgaagaag
attgaggatcttggagcagccatggaagaggcacttatcttggacaacaaatacacagaa
cacagcactgtggggctggcacagcagtgggaccaactggaccagctggggatgaggatg
caacacaacctggaacagcagatccaagcccggaacaccactggagtcactgaggaggcc
ctgaaggaattcagcatgatgttcaagcactttgacaaggacaaatctggacgacttaat
caccaggagtttaagtcttgcttgcgctctcttggctacgatctgcccatggttgaggaa
ggagagccagaccctgagtttgagtctattcttgacactgtagatcccaacagggatgga
cacgtctcgctgcaggagtacatggccttcatgattagccgggaaacggagaacgtgaaa
tccagcgaagagatcgagagcgctttccgtgccctcagctccgaggggaagccctacgtg
accaaggaggagctctaccagaacctgacccgggaacaggccgattattgcatctctcac
atgaaaccctacatggatggcaagggcagggaactgccttctgcctatgactacatagaa
tttacacgttcactgtttgtgaattga
DBGET
integrated database retrieval system
