Aphelocoma coerulescens (scrub jay): 138119581
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Entry
138119581 CDS
T10543
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
138119581 (SNAPC4)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
138119581 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138119581
NCBI-ProteinID:
XP_068887714
LinkDB
All DBs
Position
17:8450428..8463891
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AA seq
1548 aa
AA seq
DB search
MSRGPGRAGPLRSPEGLDLDAEREKIRREIEQLERSLQPGGADIHLALSDSSLGSDDDNE
DDDDEDSHAEMEVEREEDSSDDDDDDIESLPQDPETCLQMNYVYQEVIKEKIEEVELLIA
QNKEQQKEIMCELDGSKTAKAGDGRNLPANVFLGHFMKPYFKDKTTGIGPPSNEDAKEKA
AQGIKSFEQLHSAKWKTREKTLLQKSVVSDRLQRLLQPKLLKMSYWNQKLEKVKTETEKQ
TLEKQIKGLEQEIESINQLPESDLIGNRFDEHDWDKISNIHFDGQRSSEELRKFWQNWEH
PSINKKEWTEEEIERLKQIAAEHNYLDWQTIAQELGTNRTPFQCLQKYQIYNKDLKRKEW
TKDEDQMLLELVQEMRVGSHIPYKKIAYYMEGRDSAQLIYRWTKNVDPSLKKGPWTAEED
AMLMAAVTKYGAKDWYKIRTEVPGRSDAQCRDRYLKALHWDVKKGKWSLEEEEQLIELVQ
KHGLGHWSKIASELPHRTGSQCLSKWKLMIGAKKRSGATKRRHGEESSSPSESSSEEDME
LNLTDSSEEEEVTSTTRKKEYAVPSIDLWIPTGTDMQEAAGERYQIQSLLSAARAGAGTS
CSDIPRAACDGDRAADKSSELYTLLKGIAQPHSTDVVVKNAAEVMARASQSGKQVLQVSL
EDVRTILKNNTSFQRRLMLRPPGSLLAKPPGVGAAVGQDVQELPKRAQRWAREHWKRLSL
DRKLLMAVTPWVGNVLLPRTLQAGRMAFHQTKAAAIQEKVKSVSLTSTPLFALLIQLFQI
DTKGCMKIIKERKLRQLELLKANARSPQQASQNTETSSGNSSQPCSQRNSQRGIPRNTVR
RPLALKARETSTGALESSAAVQGQGRKAKTVSELLREKRLRESQAKKAMQRTVLVAPQVL
VSGPLIIQHPPQQIIPSAQAASKPAAAAGTDSQVQGSPVPTRTSSAGSASALVPENHSSA
VPETGESPGCSQGTDLQPKKEPKEQALESSPEGRGFPGMDPAAAEKAPDQGGCNGQVTSS
SSASAVLQNQAFVPQQITVVPLGLESGTNKLSLSTPVTCELKSDGPQQRPVSLLPALVTP
QAGSPVIPNSILPLAWVVTPQALLPSAVQTVVGVPQGMPGAAGGSQCQPTVTSNGNVSGL
GGTPAGTNPPQPSSAETKGPSSQLAGVPLGKDDQSTVLSPVASVSPGCSTSSVSAVTPSC
SDGSSKAPDSSAPPAAPPAAPPADSPAPCAVVLPQTQSPASTQGSDSQPVPSLTSLGKSS
DSITTNRSSSNPDSIRKCVVLQPGAAARHSNVPGSSGCSGAQARKKRPIASKPPSADVPP
QPSTSSAEKNLLDFSLISLEDEGLVKEWLSGKRGVQVPSLQTRLPYLPPFLCNIKTLSKL
LVQKAALEEQAASLLPSEASGDEGTGDVFHAIGELVQQKLGDNPAYLLLKARFLAAFTLP
AVLATLPPPKVTTTLSASRKQYEESDDEEWQSEKEVSEEETCGNELTGVQEDWRLGDEPG
DKDLDLLNQGMRAEESTAQSALGSCTDVADARAPPIRRSARFRKRRRL
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgggccgggccgggccgggcccctccgctcccccgagggcctcgacctcgat
gcggagcgggagaagatccgccgagagatcgagcagctggagcgcagcctgcagcctggc
ggggccgacatccatctggccctgtccgactccagcctcggctccgatgatgataatgaa
gatgatgatgatgaagattctcatgctgaaatggaagtggaaagagaagaagacagcagt
gatgatgatgatgatgacattgaaagcctgccacaggatccagaaacctgcctgcagatg
aactatgtgtaccaggaggttatcaaggaaaagattgaggaagtggagctgctcattgca
caaaacaaagaacagcagaaggaaatcatgtgtgagcttgatggttcaaaaacagcaaag
gcaggagatggcagaaatctaccagcaaatgtgtttttgggtcattttatgaagccatac
tttaaggataaaacaacaggaattggccctccttccaatgaagatgccaaggaaaaggca
gctcagggcataaaatcctttgagcaactgcattcagccaaatggaaaactagagagaag
acactgctgcagaagtcggtggtgagcgaccgcctgcagcgcctgctccagccaaagctg
ctcaagatgagttactggaatcagaaactggagaaagtcaagactgaaacagagaaacag
accttggaaaagcaaatcaaaggcttggagcaagaaatagagtcaattaaccaactccca
gaaagtgacttaataggaaacagattcgatgagcatgactgggacaagatttcaaacatc
cattttgatggacaacgtagctcagaagaattgaggaagttttggcaaaattgggagcat
ccaagcatcaacaaaaaggaatggactgaggaggaaatagagaggctgaagcagatagct
gctgaacacaactacctggactggcagaccattgcccaggagctggggacaaacaggaca
cctttccagtgcttgcagaagtaccaaatctataacaaagatttaaaaaggaaagaatgg
accaaggatgaggatcagatgcttttagagcttgttcaagagatgagagtgggaagccat
atcccatacaagaaaattgcttattacatggaaggaagagattctgctcagctgatttac
cgctggacaaagaatgtggaccccagcttgaagaaaggaccctggacagcagaggaagat
gctatgctgatggcagcagttacaaagtacggggcgaaggactggtacaaaatccgcacg
gaggtgccgggcaggagcgacgcccagtgccgggaccggtacttaaaagcattgcactgg
gatgtaaagaaaggcaagtggagcttggaggaagaggagcagctgattgagctggttcaa
aagcatggcctgggtcactggagtaaaatagcttccgagctgccacatcggactggctcc
caatgcctgagcaagtggaaactcatgattggtgctaagaaaagatctggggcgaccaaa
cggcgtcacggtgaggagagctccagcccttcagagagcagcagtgaggaggacatggag
ctgaacttgacagacagctcagaggaggaggaggtgaccagcaccacaaggaagaaggag
tatgcagtccccagcattgacctgtggatcccaacagggacagacatgcaggaggcagcg
ggagagagataccaaatccagtccctcctctctgctgcgagggctggtgcagggaccagc
tgcagtgacattccaagggcagcctgtgatggagacagagctgctgataaatcctctgag
ctgtacaccctgctgaagggcattgcacagccccattccacagacgtggtggtgaagaat
gcagcagaagtgatggccagggcttcccagagtggaaaacaagtgctgcaggtcagcctg
gaggacgtgagaacaatattaaagaataacacgagcttccagaggagacttatgctaaga
cctcctggcagccttttagccaaaccccctggagtgggtgcagctgttggccaggatgtc
caggagctgccaaagagagctcagcgctgggccagggagcactggaaacggctgagcctg
gacaggaagctgctgatggcagtgaccccttgggtgggcaatgtgctgctgccccgcacc
ttgcaggctgggaggatggcttttcaccagacaaaagctgctgctattcaagagaaggtt
aagtcagtcagtcttaccagcactcccctgtttgcactgctcattcagctcttccagatt
gataccaaaggctgtatgaaaattattaaggagaggaagctgaggcagttggagctgctt
aaggctaatgcaaggagtcctcagcaggcttcccaaaatacggagacttcttcaggcaat
tcatcccagccttgttcccagaggaattcccaacggggcataccaaggaatactgtcagg
agacctcttgccttgaaagcacgagaaacttccactggtgccttggagagcagtgcagcc
gtgcaggggcaggggcggaaggctaaaactgtctcggaattgctgcgagagaagcgttta
agggagtcccaggccaagaaggccatgcagaggacagtgttggttgccccacaggtgctg
gtttcagggcctctgataatccagcacccaccacagcaaatcattccctctgcacaagca
gcaagcaaacctgcagcagctgctggtacagatagccaagtacagggttcaccagtgccc
acaaggacttcttctgcaggttctgcttctgctcttgtgcctgaaaaccattcctcagca
gtgccagaaactggggaaagccccggttgctcacaagggacagatctacagcctaagaag
gaaccaaaagagcaagctctggaaagcagccctgaaggaaggggttttccgggcatggat
ccagctgcagcagagaaggccccagaccagggagggtgcaatggtcaagtcacatccagt
agctcagcttcagcagtgttgcaaaaccaggcttttgtgccacagcagatcacagtggtg
ccccttggcctggagtctggcaccaacaaattgtccctttccactccagtcacctgtgag
ctgaagagtgatgggccacagcagaggccagtcagcctgctgcccgctcttgtcactcca
caagctggttcacccgtgattcccaacagcatcctgcccttggcgtgggttgtcaccccc
caggctctgctccccagtgctgtgcagactgtggtgggtgttccccaaggaatgccaggt
gctgctgggggaagtcagtgtcagccaactgtgacttccaatggcaatgtctctggtttg
ggagggactccagctggaacaaatccacctcagcccagcagtgcagagacaaaagggcca
agttcccagctggcaggagttcctttgggaaaggatgaccagtccacagttctctcacct
gtggcctcagtgagtcctggatgcagcacatccagcgtttctgctgtaaccccctcatgt
tcagatggctcctccaaggctccagactcctctgctcctccagctgctcctccagctgct
cctccagctgacagcccagccccatgtgctgtggtgctgccccaaacacagtcccctgcc
agcactcagggctctgattcccagcctgtgcccagtctcaccagcttgggaaagagcagt
gactccatcacaacaaacagatcatcctccaatccagacagcatcaggaagtgtgttgtg
ctccagccaggagctgcagctcgtcacagcaatgtcccagggagctctggttgctctggt
gcccaggcacggaagaagagacccattgcctccaaaccaccaagtgctgacgtccctccc
cagccaagcacttccagtgcagagaaaaacctccttgacttcagcctgatctccctggag
gatgaggggctggtgaaggagtggctgagtgggaaacgaggggtccaggtgccatcactg
cagaccaggctgccttatttgccacctttcctctgcaacataaaaaccctctcaaagctc
cttgtgcagaaagcagccctggaagagcaagcagcctctctcctgccctctgaggccagt
ggggatgagggcactggggatgtcttccatgctattggagaactggtgcagcagaaactg
ggtgataaccctgcttacctcctgctgaaagccagattcctggcagccttcacactccca
gctgtcctggcaactctgcctcctcccaaagtgacaacaactctgtcagccagcaggaag
caatatgaggagagtgatgacgaggagtggcagagtgagaaagaagtgtctgaggaagag
acttgtgggaatgaattaacaggagtacaggaggattggagacttggggatgagcctgga
gacaaagatcttgatttactaaaccagggcatgagggctgaagagagcactgctcagtct
gccttgggctcctgcactgatgtggctgatgccagagctcctccaatcaggagaagtgcc
cgcttcaggaagaggaggaggttatga
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integrated database retrieval system
