Aphelocoma coerulescens (scrub jay): 138119824
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Entry
138119824 CDS
T10543
Name
(RefSeq) POU domain, class 5, transcription factor 3-like
KO
K09367
POU domain transcription factor, class 5
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138119824
03021 Transcription machinery [BR:
acoe03021
]
138119824
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
138119824
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
138119824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
138119824
NCBI-ProteinID:
XP_068888131
LinkDB
All DBs
Position
17:complement(238729..245023)
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AA seq
385 aa
AA seq
DB search
MFSPDGGLPAAPFGLLSDAGPPFPRGSFDGAPAQPLFFPFAATPEPEPARDPPPARAWLP
PPAPAPPAKAEARPGRPCSQPETEPRTAACCGPAWPPPPWAGPPAPGPAALPGPPFPGPA
APAFPGPQLCPAALQPGSGGPSGLGSSGSSSGAASEGGHSSDSGEEDAPTSGELEQFAKD
LKHKRIMLGFTQADVGLALGTLYGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE
NTDNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSPQEISQIAEDLNLD
KDVVRVWFCNRRQKGKRLLLPYGNEAEGMMYDMNQPLVPSALPIPVTSQGYSLAPSPPVY
MPTFHKAEMFPQALQPGLSMSNSGH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcccggacggggggctgccggccgcccccttcggcctcctatccgacgccgga
cctcccttcccccgcggcagcttcgacggggcgcccgcccagccgctcttcttccccttc
gccgccacccccgagcccgagcccgcccgcgacccgccgccggcccgcgcctggctgccc
ccgcccgctcccgcgccgcccgccaaggcggaggcgcgcccgggccggccctgcagccag
ccggagaccgagccccgcaccgccgcttgctgcggcccggcctggccgcccccgccctgg
gccggccctccggcccccggcccagccgccctgcccgggccgcccttccctggcccggcc
gcccctgccttccctggcccccagctctgccccgccgcgctgcagccgggctccggcggc
ccctcggggctgggcagcagcggcagctccagcggcgccgccagcgagggcggacactcc
agcgacagcggtgaggaggatgcgccaacctcgggagagctggagcagttcgccaaggac
ctcaagcacaagcgcatcatgctgggcttcacccaggctgacgtgggactggcgctgggc
acgctctacgggaagatgttcagccagacgaccatctgccgcttcgaagcgctccagctc
agcttcaagaacatgtgcaagctcaaaccgctgctgcagcgctggctcaacgaggcggag
aacacggacaacatgcaagagatgtgcaatgcagagcaagtactggcccaagcccggaag
agaaaacgcaggaccagcatcgagaccaacgtgaaagggacgctggagagcttcttccgc
aagtgcgtgaaacccagtccccaggagatctcccagatcgctgaggacctcaacctggat
aaagatgtggtccgggtctggttctgcaaccggcgtcagaaaggcaaacggctgctgctg
ccctatggcaacgaggcagaggggatgatgtatgacatgaaccagcccctggtgccctcc
gccttgcccatcccagtgacgtcccagggctacagcctggcaccctcccctcctgtctac
atgccgaccttccacaaagccgagatgttcccacaagcgctgcagcctgggctctccatg
agtaacagtggccactga
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