Aphelocoma coerulescens (scrub jay): 138120018
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Entry
138120018 CDS
T10543
Name
(RefSeq) ATP-binding cassette sub-family A member 10-like isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138120018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acoe02000
]
138120018
Transporters [BR:
acoe02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
138120018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
AAA_22
Rad17
Motif
Other DBs
NCBI-GeneID:
138120018
NCBI-ProteinID:
XP_068888522
LinkDB
All DBs
Position
18:2499057..2520934
Genome browser
AA seq
1631 aa
AA seq
DB search
MKTLQRSVSVFQQTKILLWKNVLIKWRMRMQSFQEWILSLLFLLLVFIVSSFMVLVPYPE
VPYSHLGHLDDPAFNATGVTIMFTPVTATTRHIMNKVASSSVMTGVKLEELDDERAMEKA
WISNEETIGVVFKDNFSYQLRFPTSHVVIPNEVFGYIDSCYEFSPMYCNSPKYWYKGFLS
LQSSIDAAIIEMVANHSVWEEMKSIAGVRMKSQSILFSISLEYSYFMVVIVMCFFPFMYF
LSRNVTREKKKLKVLMRTMGLQDIAFWLSWSLLYSLYVLIFSCLLTALVLWEPFYTSSFP
AVSLLFFLYGLACIHLVFMLCSLLRTSKLVSSVGFLIIFIFGFLSLAVLIEDVPEPLKWF
LGLMCPFAFNTGIVKIFNLEKYGIGFSFSNLMEEAYFLFSTYVLLVFDSVLYMLLALYFD
KILPGKYGIPDPPLFCLKASYWKSRRGSTTDMPRSTANPEELLGDDVEPVPPEFLGKEAI
RLHNIKKAYKKKDKKTEALRGLSLNIYEGQITALLGHSGAGKTTLLNVLSGLSFPSEGSA
TIYNYRLSEMGDREEIRGMIGICPQFNTQFEVLTVKENLKTFAEIKGIKSKEVEREVQNI
LELLDISNIQDTQAEKLSGGQKRKLSIGIAMLGNPQVLLLDEPTAGLDPLSRHQVWSLLR
EQQAGRVILFSTQFMDEADILADRKAFISHGRLKCVGSSLFLKKKWGICYHLRIHVSESC
GLENVTSLVKGQIPNATFSGHSQYELRYKLPLENVNKFPDLFSSLDSCSEQGIINYGVSM
TTLEDVFLRLEGEATATQEDEHIPGEEWAEAGPQCLDEARPGSLLLSDTRKASVQGLALW
RQQVSAMAQVHFFKLKSSVKALQSILLLYGVFLLPLVLQLCMMAGLLSVSAWQLSPAQYF
LPLGRRSYLEPTTLLVYNHTGTGIDDFIHVLQSQDLTVEIAKEENITEELQHNGAIEVSR
EGQSYRFTVLCHLEAINCFPVLVNIISNALLRTLNSTQHIQIWSHPFFSLFSPRYWDYFM
FIYFIYMLLLFPGFPPHFAMGYTQDCKTGARAQLRISGLFPSAYWCGQALVDIPLCWILL
FSMFGFQFAMSNNISVSASTIFLLVMGTLGYGISLVLLIYVISFNSRKGWSCDLWSFILI
VVCFISLFISRILDLVSGTSTSLYVLSLLVPVYPLMGFVIDGQQIFLEDPETSRTAPDSD
VLIAVFAPYIHSVAFILLLRFLELKYGKAVLRQDPIFRISPRKESSQQHPKELEEEDEDV
RAEREAVRNALVAPSQEEKSVIIVSNLCKEYKVKKAGSFLKKKKKKKTATKNLSFCVKKG
EVLGLLGPNGAGKSTAIKMITGETTLTAGQVLMKRGDGGGSQLQEQAPAFLGYCPQEDPL
WPDLTPQQHLRVYAAVKGLRKEDTAAAVDRIVNALQLQDYLNKKVRKLPAGITRKLCVAL
SVLGNPTVLLLDEPSTGMDPNGQRRVWKTIRDALKTKESGAILTTHYMEEAEAVCDRVAI
LVAGQLRCIGSIQYLKNKFGKGYLLEIKVKDPESSDVLHAEILKIFPGAARQERFPSLLV
YKVPMKDALPLSQSFSKLEEAKRSCSLEEYSFSLNTLTQVFLELSREQEKDNFDLTLDGT
FDWKQLQQEDC
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctccagaggagtgtaagtgtattccagcaaactaaaattctcttgtggaaa
aatgtcctgatcaagtggaggatgaggatgcagagctttcaggagtggattctgtccctg
ctcttcctgctcctggtgttcattgtgtcctcgttcatggtgctagtcccctaccctgaa
gtgccctacagccacctggggcacctggatgaccctgccttcaatgccaccggggtcacc
atcatgttcacccccgtcactgccaccacgaggcacatcatgaataaagtggcctccagc
tctgtcatgacaggtgtaaaactggaggaactggatgatgagagagccatggagaaagcc
tggatttcaaatgaggaaacgataggggttgtatttaaggacaacttctcctaccagctc
aggtttcccactagccacgtggttattcccaatgaagtctttggatacatagacagctgc
tacgagttctcaccgatgtactgcaacagccccaagtactggtacaaaggcttcctgtcc
ctgcagtccagcattgatgctgctattatagagatggtggcaaatcattctgtttgggaa
gaaatgaaatccattgctggcgtccgaatgaagtcccagagcatcctcttctccatcagc
ctggagtacagctatttcatggtggttatcgtgatgtgcttctttcccttcatgtatttc
ttatcgaggaatgttactcgagaaaagaaaaagctcaaagtattgatgaggaccatgggg
ctgcaggacattgcattttggctctcctggagtttgctgtactctctttatgtgctgatc
ttctcgtgcctgctgacagccctcgtgctgtgggagcctttctacaccagcagcttccct
gcagtctcactcctgtttttcctctatggcctggcgtgtatccacctggttttcatgctc
tgctccctcttgaggacctccaagcttgtcagctccgtcgggttcctcatcatctttatc
ttcggattcctgagcctggcggtgctgatagaagatgtcccagagccactgaagtggttt
cttggtctcatgtgtccttttgcattcaacactggcattgtcaagattttcaatttagag
aaatatggaataggtttctccttttccaaccttatggaggaagcatactttttattttca
acatacgtattgctggtgtttgactcagtcttgtacatgctgttggctctgtatttcgac
aaaattctgccaggcaaatatgggattccagaccctcctctgttctgcctgaaggcttcg
tactggaagagcaggagaggctccaccacggacatgcccagatccacagcgaaccctgag
gagctccttggggatgatgtagaacctgtgccccccgaattcctggggaaagaggccatc
aggctccacaatattaaaaaagcctataaaaagaaggacaagaagacagaagctttaaga
ggtttgtctttaaacatttatgagggtcagatcacggccttgctgggccacagtggggct
ggaaagacaacgctgctgaacgtgctcagtgggctcagcttcccttcagaaggctctgcc
accatatacaactacagactctccgaaatgggagacagggaggagatcagggggatgatc
gggatttgcccgcagttcaacacacagtttgaggtcttgacagtgaaagaaaacctgaaa
acttttgcagaaatcaagggcatcaagtccaaagaggtagagcgagaggtgcaaaacatt
ctggaactgctggatatcagcaacattcaagacactcaagctgagaaactgagtggtggg
cagaagaggaagttatccattggaatagccatgcttggaaacccccaggttttgctcctg
gatgagccgacggctgggctggatcctctctccaggcaccaggtgtggagcctcctgcgg
gagcagcaggcggggcgggtgatcctgttcagcacccagttcatggatgaggccgatatc
ctggcggaccgcaaggcttttatctcacacgggaggctgaagtgcgttggctcttctctg
ttcctgaagaaaaaatgggggatttgctatcatttaaggatccacgtcagtgagtcttgt
ggcttggagaacgtgacatccctggtgaaagggcagatccccaacgccacgttctcagga
cacagccagtatgaactgagatataaactgcctttagaaaacgtgaataaattcccagat
ctgttcagtagcctcgacagctgctctgagcagggaattataaactatggagtcagcatg
acgaccctggaggatgtgttcctaaggctggagggagaagccacagcgactcaagaagat
gagcacatccctggggaggaatgggcagaagcaggaccacaatgcctcgacgaggcaagg
ccgggctccctgctgctctcggacaccaggaaggcgtcggtccagggcctggccctctgg
aggcagcaggtctctgccatggcacaggtgcacttcttcaagctcaagagctctgtgaag
gccctgcagtcgattttgctgctctatggggtttttctgcttcctctggtgctgcaactg
tgcatgatggctggcttgctgagtgtgagtgcctggcagctctctcctgcacagtacttc
ttgcccctggggaggagatcctacctggagcccaccaccctgctggtctacaaccacaca
ggcacaggcattgatgacttcatccatgtgctccagagccaggatcttacagtggaaata
gcaaaggaggaaaatatcacagaggaactacaacacaacggggctatagaagtctcccgt
gaaggtcagagctacaggttcaccgtgctgtgccacttggaggccatcaactgcttccca
gtgctggtgaacatcatcagcaacgccctgctgagaaccctcaactccacccagcacatc
cagatctggagccacccattcttctctctgttcagtccacgatactgggattattttatg
ttcatttacttcatttacatgctgctgttgttccctggttttcctcctcactttgcaatg
ggctacacgcaggattgtaagacgggagctcgtgctcagctgcgcatctcggggctcttc
ccctcggcctactggtgtggtcaggcactggtggacatcccactctgctggatcctgctc
ttctccatgtttgggttccagtttgccatgagcaacaatatttctgtcagcgccagcacc
atcttcttgctggtcatggggacgttgggttatggaatttccctcgttctcttaatctac
gtgatctccttcaactctcgcaaaggatggagctgtgatctttggtcttttatcctgatt
gtggtgtgctttatttctcttttcatcagcagaatcctggatctcgtgagcggcaccagc
acctccctctatgttttgtccctcctggttcccgtgtaccccctgatgggttttgtgatc
gatggccagcagattttcttggaggaccctgagacatctcgtacagctccagacagtgat
gtgctgattgctgtctttgcaccttacatccattctgtggctttcattcttcttcttcgc
tttttggagttaaaatacggaaaagcagtgctgagacaggacccaatatttaggatttcc
ccaagaaaagaaagcagccagcagcaccccaaggagctcgaggaggaagatgaagatgtt
agagctgaaagggaagcagtgagaaatgccctggtggctccgagtcaggaggagaaatca
gtcattatagtcagcaatctgtgcaaggaatataaagtaaagaaagctggctcgtttttg
aagaagaagaagaagaagaaaacagccaccaaaaacctttccttctgtgttaaaaaagga
gaagtgttaggacttctggggcccaacggagctgggaaaagcacagctatcaaaatgatc
actggagagacaaccctgactgctgggcaggtgctgatgaagagaggagatggaggaggc
tcccagctccaggagcaggcccctgcattcctgggatactgcccccaggaggaccctctc
tggccggacctcaccccgcagcagcacctgagggtctacgcggccgtgaaggggctgcgc
aaggaggacacagctgctgctgtggacagaattgtgaatgctctgcagcttcaagactac
ttaaacaaaaaagtcagaaaattacctgctgggataaccaggaagctgtgtgtggcgctg
tccgtgctgggcaatcccaccgtgctgctcctggatgagccctccaccggcatggatccc
aacgggcagcgccgtgtctggaaaacgattcgggatgccctgaaaaccaaggagtcggga
gccatcctgaccacgcactacatggaggaggcggaggccgtgtgtgaccgtgtggccatc
ctggtggccgggcagctccggtgcattggctccatccagtacctgaagaacaagtttggc
aaagggtatctcctggaaatcaaggtcaaggatccagagagctctgatgttctgcatgct
gagattttgaagattttccccggtgcagcccgtcaggagaggttcccctctttgcttgtc
tacaaggtcccaatgaaagatgcactgcccctgtcccagtccttctccaagctggaggaa
gccaaacgaagctgcagcctcgaggagtacagcttctccttgaataccctgactcaggtg
tttctggagctctcccgagagcaggaaaaggataattttgatctgactttggatgggact
tttgactggaagcagctgcagcaggaggactgttaa
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